RNA–Protein interactions for RNA: ENST00000326656.12

PTPMT1-201, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-201ENST00000326656 FSCN3Q9NQT6 498 aa18.39■□□□□ 0.53
PTPMT1-201ENST00000326656 CTNND2Q9UQB3 1225 aa18.39■□□□□ 0.53
PTPMT1-201ENST00000326656 NEUROG3Q9Y4Z2 214 aa18.39■□□□□ 0.53
PTPMT1-201ENST00000326656 BCAT2O15382 392 aaPredicted RBP18.38■□□□□ 0.53
PTPMT1-201ENST00000326656 TBL1XO60907 577 aa18.38■□□□□ 0.53
PTPMT1-201ENST00000326656 ASLP04424 464 aa18.38■□□□□ 0.53
PTPMT1-201ENST00000326656 ZNF883P0CG24 379 aa18.38■□□□□ 0.53
PTPMT1-201ENST00000326656 SFSWAPQ12872 951 aaKnown RBP18.38■□□□□ 0.53
PTPMT1-201ENST00000326656 ARID5BQ14865 1188 aa18.38■□□□□ 0.53
PTPMT1-201ENST00000326656 ZNF423Q2M1K9 1284 aa18.38■□□□□ 0.53
PTPMT1-201ENST00000326656 DCAF12L1Q5VU92 463 aa18.38■□□□□ 0.53
PTPMT1-201ENST00000326656 RFWD3Q6PCD5 774 aa18.38■□□□□ 0.53
PTPMT1-201ENST00000326656 TMEM110Q86TL2 294 aa18.38■□□□□ 0.53
PTPMT1-201ENST00000326656 DQX1Q8TE96 717 aaKnown RBP18.38■□□□□ 0.53
PTPMT1-201ENST00000326656 CLEC4CQ8WTT0 213 aa18.38■□□□□ 0.53
PTPMT1-201ENST00000326656 TTC17Q96AE7 1141 aa18.38■□□□□ 0.53
PTPMT1-201ENST00000326656 SLC39A13Q96H72 371 aa18.38■□□□□ 0.53
PTPMT1-201ENST00000326656 FCRL2Q96LA5 508 aaPredicted RBP18.38■□□□□ 0.53
PTPMT1-201ENST00000326656 MED15Q96RN5 788 aa18.38■□□□□ 0.53
PTPMT1-201ENST00000326656 SCNM1Q9BWG6 230 aa18.38■□□□□ 0.53
PTPMT1-201ENST00000326656 MIS12Q9H081 205 aa18.38■□□□□ 0.53
PTPMT1-201ENST00000326656 INTS2Q9H0H0 1204 aaKnown RBP18.38■□□□□ 0.53
PTPMT1-201ENST00000326656 LHX5Q9H2C1 402 aa18.38■□□□□ 0.53
PTPMT1-201ENST00000326656 UBE2TQ9NPD8 197 aaPredicted RBP18.38■□□□□ 0.53
PTPMT1-201ENST00000326656 SCML1Q9UN30 329 aa18.38■□□□□ 0.53
PTPMT1-201ENST00000326656 AKAP13Q12802 2813 aa18.38■□□□□ 0.53
PTPMT1-201ENST00000326656 FAM221BA6H8Z2 402 aa18.37■□□□□ 0.53
PTPMT1-201ENST00000326656 PIK3R2O00459 728 aa18.37■□□□□ 0.53
PTPMT1-201ENST00000326656 BIN1O00499 593 aa18.37■□□□□ 0.53
PTPMT1-201ENST00000326656 KRT5P13647 590 aa18.37■□□□□ 0.53
PTPMT1-201ENST00000326656 SLC6A4P31645 630 aa18.37■□□□□ 0.53
PTPMT1-201ENST00000326656 YWHAZP63104 245 aaKnown RBP18.37■□□□□ 0.53
PTPMT1-201ENST00000326656 GRIK2Q13002 908 aa18.37■□□□□ 0.53
PTPMT1-201ENST00000326656 C1orf216Q8TAB5 229 aa18.37■□□□□ 0.53
PTPMT1-201ENST00000326656 CYB5D2Q8WUJ1 264 aa18.37■□□□□ 0.53
PTPMT1-201ENST00000326656 ZNF606Q8WXB4 792 aa18.37■□□□□ 0.53
PTPMT1-201ENST00000326656 LMLNQ96KR4 655 aa18.37■□□□□ 0.53
PTPMT1-201ENST00000326656 PRSS16Q9NQE7 514 aa18.37■□□□□ 0.53
PTPMT1-201ENST00000326656 ST7Q9NRC1 585 aa18.37■□□□□ 0.53
PTPMT1-201ENST00000326656 RWDD2AQ9UIY3 292 aa18.37■□□□□ 0.53
PTPMT1-201ENST00000326656 IGF2RP11717 2491 aa18.37■□□□□ 0.53
PTPMT1-201ENST00000326656 GOLGA6L7A0A1B0GV03 622 aa18.36■□□□□ 0.53
PTPMT1-201ENST00000326656 SPAARA0A1B0GVQ0 90 aa18.36■□□□□ 0.53
PTPMT1-201ENST00000326656 MUC22E2RYF6 1773 aaPredicted RBP18.36■□□□□ 0.53
PTPMT1-201ENST00000326656 CAPN9O14815 690 aa18.36■□□□□ 0.53
PTPMT1-201ENST00000326656 DNTTP04053 509 aa18.36■□□□□ 0.53
PTPMT1-201ENST00000326656 HLA-EP13747 358 aa18.36■□□□□ 0.53
PTPMT1-201ENST00000326656 CD70P32970 193 aa18.36■□□□□ 0.53
PTPMT1-201ENST00000326656 SGSHP51688 502 aa18.36■□□□□ 0.53
PTPMT1-201ENST00000326656 STX17P56962 302 aa18.36■□□□□ 0.53
PTPMT1-201ENST00000326656 ST8SIA6P61647 398 aa18.36■□□□□ 0.53
PTPMT1-201ENST00000326656 MS4A13Q5J8X5 152 aa18.36■□□□□ 0.53
PTPMT1-201ENST00000326656 NADSYN1Q6IA69 706 aa18.36■□□□□ 0.53
PTPMT1-201ENST00000326656 USP30Q70CQ3 517 aa18.36■□□□□ 0.53
PTPMT1-201ENST00000326656 MFN1Q8IWA4 741 aa18.36■□□□□ 0.53
PTPMT1-201ENST00000326656 FAM149B1Q96BN6 582 aa18.36■□□□□ 0.53
PTPMT1-201ENST00000326656 MIR1-1HGQ9H1L0 117 aa18.36■□□□□ 0.53
PTPMT1-201ENST00000326656 THAP9Q9H5L6 903 aa18.36■□□□□ 0.53
PTPMT1-201ENST00000326656 POPDC2Q9HBU9 364 aa18.36■□□□□ 0.53
PTPMT1-201ENST00000326656 SGK2Q9HBY8 427 aa18.36■□□□□ 0.53
PTPMT1-201ENST00000326656 KIAA1468Q9P260 1216 aa18.36■□□□□ 0.53
PTPMT1-201ENST00000326656 NAALADL1Q9UQQ1 740 aa18.36■□□□□ 0.53
PTPMT1-201ENST00000326656 MSRB2Q9Y3D2 182 aa18.36■□□□□ 0.53
PTPMT1-201ENST00000326656 GTPBP10A4D1E9 387 aaKnown RBP18.35■□□□□ 0.53
PTPMT1-201ENST00000326656 C1QTNF9BB2RNN3 333 aa18.35■□□□□ 0.53
PTPMT1-201ENST00000326656 GADD45BO75293 160 aaPredicted RBP18.35■□□□□ 0.53
PTPMT1-201ENST00000326656 LETM1O95202 739 aaPredicted RBP18.35■□□□□ 0.53
PTPMT1-201ENST00000326656 CER1O95813 267 aa18.35■□□□□ 0.53
PTPMT1-201ENST00000326656 APOEP02649 317 aa18.35■□□□□ 0.53
PTPMT1-201ENST00000326656 C1QTNF9P0C862 333 aa18.35■□□□□ 0.53
PTPMT1-201ENST00000326656 AFF3P51826 1226 aaKnown RBP18.35■□□□□ 0.53
PTPMT1-201ENST00000326656 RPS14P62263 151 aaKnown RBP18.35■□□□□ 0.53
PTPMT1-201ENST00000326656 MTA1Q13330 715 aa18.35■□□□□ 0.53
PTPMT1-201ENST00000326656 TRIP6Q15654 476 aaKnown RBP18.35■□□□□ 0.53
PTPMT1-201ENST00000326656 TTC31Q49AM3 519 aaPredicted RBP18.35■□□□□ 0.53
PTPMT1-201ENST00000326656 ZNF776Q68DI1 518 aaPredicted RBP18.35■□□□□ 0.53
PTPMT1-201ENST00000326656 DENND1BQ6P3S1 775 aa18.35■□□□□ 0.53
PTPMT1-201ENST00000326656 ZCCHC9Q8N567 271 aaKnown RBP18.35■□□□□ 0.53
PTPMT1-201ENST00000326656 OR2I1PQ8NGU4 316 aa18.35■□□□□ 0.53
PTPMT1-201ENST00000326656 BTN2A3PQ96KV6 586 aa18.35■□□□□ 0.53
PTPMT1-201ENST00000326656 TMEM121BQ9BXQ6 578 aaPredicted RBP18.35■□□□□ 0.53
PTPMT1-201ENST00000326656 BTBD1Q9H0C5 482 aa18.35■□□□□ 0.53
PTPMT1-201ENST00000326656 RSPH9Q9H1X1 276 aaPredicted RBP18.35■□□□□ 0.53
PTPMT1-201ENST00000326656 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.35■□□□□ 0.53
PTPMT1-201ENST00000326656 KIAA1522Q9P206 1035 aaPredicted RBP18.35■□□□□ 0.53
PTPMT1-201ENST00000326656 SLC12A6Q9UHW9 1150 aa18.35■□□□□ 0.53
PTPMT1-201ENST00000326656 EIF2B4Q9UI10 523 aaKnown RBP18.35■□□□□ 0.53
PTPMT1-201ENST00000326656 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.35■□□□□ 0.53
PTPMT1-201ENST00000326656 PCDHB9Q9Y5E1 797 aa18.35■□□□□ 0.53
PTPMT1-201ENST00000326656 PCDHGB2Q9Y5G2 931 aa18.35■□□□□ 0.53
PTPMT1-201ENST00000326656 KNL1Q8NG31 2342 aa18.34■□□□□ 0.53
PTPMT1-201ENST00000326656 TARSL2A2RTX5 802 aaKnown RBP18.34■□□□□ 0.53
PTPMT1-201ENST00000326656 PAPSS1O43252 624 aaPredicted RBP18.34■□□□□ 0.53
PTPMT1-201ENST00000326656 SH3BP5O60239 455 aa18.34■□□□□ 0.53
PTPMT1-201ENST00000326656 RNASEH1O60930 286 aaKnown RBP18.34■□□□□ 0.53
PTPMT1-201ENST00000326656 MOCS3O95396 460 aa18.34■□□□□ 0.53
PTPMT1-201ENST00000326656 CALCAP01258 141 aa18.34■□□□□ 0.53
PTPMT1-201ENST00000326656 GLI1P08151 1106 aa18.34■□□□□ 0.53
PTPMT1-201ENST00000326656 SRPRAP08240 638 aaKnown RBP18.34■□□□□ 0.53
PTPMT1-201ENST00000326656 SLC2A3P11169 496 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms