RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 CMASQ8NFW8 434 aaPredicted RBP9.92□□□□□ -0.82
PTPRA-202ENST00000318266 TSPAN14Q8NG11 270 aa9.92□□□□□ -0.82
PTPRA-202ENST00000318266 ATP2A3Q93084 1043 aa9.92□□□□□ -0.82
PTPRA-202ENST00000318266 RCN3Q96D15 328 aa9.92□□□□□ -0.82
PTPRA-202ENST00000318266 ADPGKQ9BRR6 497 aa9.92□□□□□ -0.82
PTPRA-202ENST00000318266 MAGEB5Q9BZ81 275 aa9.92□□□□□ -0.82
PTPRA-202ENST00000318266 NIF3L1Q9GZT8 377 aa9.92□□□□□ -0.82
PTPRA-202ENST00000318266 TIMMDC1Q9NPL8 285 aa9.92□□□□□ -0.82
PTPRA-202ENST00000318266 XPNPEP3Q9NQH7 507 aa9.92□□□□□ -0.82
PTPRA-202ENST00000318266 CNTN6Q9UQ52 1028 aa9.92□□□□□ -0.82
PTPRA-202ENST00000318266 EFR3BQ9Y2G0 817 aa9.92□□□□□ -0.82
PTPRA-202ENST00000318266 SIPA1L1O43166 1804 aa9.92□□□□□ -0.82
PTPRA-202ENST00000318266 TMX2-CTNND1H3BSU7 103 aa9.92□□□□□ -0.82
PTPRA-202ENST00000318266 P4HA1P13674 534 aa9.92□□□□□ -0.82
PTPRA-202ENST00000318266 PSMC3P17980 439 aa9.92□□□□□ -0.82
PTPRA-202ENST00000318266 EIF4BP23588 611 aaKnown RBP9.92□□□□□ -0.82
PTPRA-202ENST00000318266 CAP2P40123 477 aa9.92□□□□□ -0.82
PTPRA-202ENST00000318266 NR1H2P55055 460 aa9.92□□□□□ -0.82
PTPRA-202ENST00000318266 PRAMEP78395 509 aa9.92□□□□□ -0.82
PTPRA-202ENST00000318266 EMC2Q15006 297 aa9.92□□□□□ -0.82
PTPRA-202ENST00000318266 ZNF699Q32M78 642 aa9.92□□□□□ -0.82
PTPRA-202ENST00000318266 XYLT1Q86Y38 959 aa9.92□□□□□ -0.82
PTPRA-202ENST00000318266 DSELQ8IZU8 1212 aa9.92□□□□□ -0.82
PTPRA-202ENST00000318266 AHI1Q8N157 1196 aa9.92□□□□□ -0.82
PTPRA-202ENST00000318266 PQLC3Q8N755 202 aa9.92□□□□□ -0.82
PTPRA-202ENST00000318266 PLD5Q8N7P1 536 aa9.92□□□□□ -0.82
PTPRA-202ENST00000318266 NLRP7Q8WX94 980 aa9.92□□□□□ -0.82
PTPRA-202ENST00000318266 SIGLEC10Q96LC7 697 aa9.92□□□□□ -0.82
PTPRA-202ENST00000318266 EBNA1BP2Q99848 306 aaKnown RBP9.92□□□□□ -0.82
PTPRA-202ENST00000318266 HMGXB4Q9UGU5 601 aa9.92□□□□□ -0.82
PTPRA-202ENST00000318266 RSL24D1Q9UHA3 163 aaKnown RBP9.92□□□□□ -0.82
PTPRA-202ENST00000318266 ZNF232Q9UNY5 417 aa9.92□□□□□ -0.82
PTPRA-202ENST00000318266 UTRNP46939 3433 aa9.91□□□□□ -0.82
PTPRA-202ENST00000318266 FAM159BA6NKW6 160 aa9.91□□□□□ -0.82
PTPRA-202ENST00000318266 TTC36A6NLP5 189 aa9.91□□□□□ -0.82
PTPRA-202ENST00000318266 TRDMT1O14717 391 aaKnown RBP9.91□□□□□ -0.82
PTPRA-202ENST00000318266 PRPSAP2O60256 369 aa9.91□□□□□ -0.82
PTPRA-202ENST00000318266 THRAP10827 490 aa9.91□□□□□ -0.82
PTPRA-202ENST00000318266 SFNP31947 248 aa9.91□□□□□ -0.82
PTPRA-202ENST00000318266 DACT2Q5SW24 774 aa9.91□□□□□ -0.82
PTPRA-202ENST00000318266 BNC2Q6ZN30 1099 aaPredicted RBP9.91□□□□□ -0.82
PTPRA-202ENST00000318266 MYO1HQ8N1T3 1032 aa9.91□□□□□ -0.82
PTPRA-202ENST00000318266 UBR7Q8N806 425 aa9.91□□□□□ -0.82
PTPRA-202ENST00000318266 CNKSR2Q8WXI2 1034 aa9.91□□□□□ -0.82
PTPRA-202ENST00000318266 ATP6V0A1Q93050 837 aa9.91□□□□□ -0.82
PTPRA-202ENST00000318266 KLHL32Q96NJ5 620 aa9.91□□□□□ -0.82
PTPRA-202ENST00000318266 WRNIP1Q96S55 665 aa9.91□□□□□ -0.82
PTPRA-202ENST00000318266 PDCD2LQ9BRP1 358 aa9.91□□□□□ -0.82
PTPRA-202ENST00000318266 ZNF341Q9BYN7 854 aa9.91□□□□□ -0.82
PTPRA-202ENST00000318266 SDCBP2Q9H190 292 aa9.91□□□□□ -0.82
PTPRA-202ENST00000318266 NMRK2Q9NPI5 230 aa9.91□□□□□ -0.82
PTPRA-202ENST00000318266 STK39Q9UEW8 545 aa9.91□□□□□ -0.82
PTPRA-202ENST00000318266 RIMS3Q9UJD0 308 aa9.91□□□□□ -0.82
PTPRA-202ENST00000318266 RAB26Q9ULW5 256 aa9.91□□□□□ -0.82
PTPRA-202ENST00000318266 MYO18AQ92614 2054 aaKnown RBP9.91□□□□□ -0.82
PTPRA-202ENST00000318266 M0QYV0 167 aa9.91□□□□□ -0.82
PTPRA-202ENST00000318266 ZNF195O14628 629 aa9.91□□□□□ -0.82
PTPRA-202ENST00000318266 GLRA3O75311 464 aa9.91□□□□□ -0.82
PTPRA-202ENST00000318266 ERVK-10P10266 1014 aa9.91□□□□□ -0.82
PTPRA-202ENST00000318266 PDGFRAP16234 1089 aa9.91□□□□□ -0.82
PTPRA-202ENST00000318266 SAT1P21673 171 aa9.91□□□□□ -0.82
PTPRA-202ENST00000318266 CEACAM7Q14002 265 aa9.91□□□□□ -0.82
PTPRA-202ENST00000318266 CA9Q16790 459 aa9.91□□□□□ -0.82
PTPRA-202ENST00000318266 KRT80Q6KB66 452 aa9.91□□□□□ -0.82
PTPRA-202ENST00000318266 PPP1R2P3Q6NXS1 205 aa9.91□□□□□ -0.82
PTPRA-202ENST00000318266 NAPRTQ6XQN6 538 aa9.91□□□□□ -0.82
PTPRA-202ENST00000318266 ANKRD23Q86SG2 305 aa9.91□□□□□ -0.82
PTPRA-202ENST00000318266 NUP93Q8N1F7 819 aa9.91□□□□□ -0.82
PTPRA-202ENST00000318266 FNDC8Q8TC99 324 aa9.91□□□□□ -0.82
PTPRA-202ENST00000318266 FRMD8P1Q9BZ68 369 aaPredicted RBP9.91□□□□□ -0.82
PTPRA-202ENST00000318266 DHX35Q9H5Z1 703 aaKnown RBP9.91□□□□□ -0.82
PTPRA-202ENST00000318266 ZNF696Q9H7X3 374 aa9.91□□□□□ -0.82
PTPRA-202ENST00000318266 TCF7L2Q9NQB0 619 aa9.91□□□□□ -0.82
PTPRA-202ENST00000318266 RRN3Q9NYV6 651 aa9.91□□□□□ -0.82
PTPRA-202ENST00000318266 TXNDC16Q9P2K2 825 aa9.91□□□□□ -0.82
PTPRA-202ENST00000318266 COPG2Q9UBF2 871 aa9.91□□□□□ -0.82
PTPRA-202ENST00000318266 CTDP1Q9Y5B0 961 aaPredicted RBP9.91□□□□□ -0.82
PTPRA-202ENST00000318266 CHRNGP07510 517 aa9.9□□□□□ -0.82
PTPRA-202ENST00000318266 VARSP26640 1264 aaKnown RBP9.9□□□□□ -0.82
PTPRA-202ENST00000318266 PIK3R1P27986 724 aa9.9□□□□□ -0.82
PTPRA-202ENST00000318266 YWHAEP62258 255 aaKnown RBP9.9□□□□□ -0.82
PTPRA-202ENST00000318266 MPP3Q13368 585 aa9.9□□□□□ -0.82
PTPRA-202ENST00000318266 DLG2Q15700 870 aa9.9□□□□□ -0.82
PTPRA-202ENST00000318266 FSCBQ5H9T9 825 aa9.9□□□□□ -0.82
PTPRA-202ENST00000318266 OR6B2Q6IFH4 312 aa9.9□□□□□ -0.82
PTPRA-202ENST00000318266 ZNF534Q76KX8 674 aa9.9□□□□□ -0.82
PTPRA-202ENST00000318266 FAM160B2Q86V87 743 aa9.9□□□□□ -0.82
PTPRA-202ENST00000318266 PLD6Q8N2A8 252 aaKnown RBP9.9□□□□□ -0.82
PTPRA-202ENST00000318266 KYQ8NBH2 561 aa9.9□□□□□ -0.82
PTPRA-202ENST00000318266 DIS3LQ8TF46 1054 aaKnown RBP9.9□□□□□ -0.82
PTPRA-202ENST00000318266 ATP6V1E2Q96A05 226 aa9.9□□□□□ -0.82
PTPRA-202ENST00000318266 RNF157Q96PX1 679 aa9.9□□□□□ -0.82
PTPRA-202ENST00000318266 SLC4A5Q9BY07 1137 aa9.9□□□□□ -0.82
PTPRA-202ENST00000318266 CAB39LQ9H9S4 337 aa9.9□□□□□ -0.82
PTPRA-202ENST00000318266 PFDN4Q9NQP4 134 aa9.9□□□□□ -0.82
PTPRA-202ENST00000318266 DNAJC28Q9NX36 388 aa9.9□□□□□ -0.82
PTPRA-202ENST00000318266 EPS15L1Q9UBC2 864 aa9.9□□□□□ -0.82
PTPRA-202ENST00000318266 FEM1BQ9UK73 627 aa9.9□□□□□ -0.82
PTPRA-202ENST00000318266 CLEC11AQ9Y240 323 aa9.9□□□□□ -0.82
PTPRA-202ENST00000318266 SH3GLB1Q9Y371 365 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms