RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 ANKRD60Q9BZ19 345 aa4.9□□□□□ -1.63
PTPN13-201ENST00000316707 UNC93B1Q9H1C4 597 aa4.9□□□□□ -1.63
PTPN13-201ENST00000316707 CAAP1Q9H8G2 361 aa4.9□□□□□ -1.63
PTPN13-201ENST00000316707 COPS7BQ9H9Q2 264 aaPredicted RBP4.9□□□□□ -1.63
PTPN13-201ENST00000316707 NRBP2Q9NSY0 501 aa4.9□□□□□ -1.63
PTPN13-201ENST00000316707 FAM198AQ9UFP1 575 aa4.9□□□□□ -1.63
PTPN13-201ENST00000316707 PCDHA11Q9Y5I1 949 aa4.9□□□□□ -1.63
PTPN13-201ENST00000316707 MDM4O15151 490 aa4.9□□□□□ -1.63
PTPN13-201ENST00000316707 GPC4O75487 556 aa4.9□□□□□ -1.63
PTPN13-201ENST00000316707 COL6A2P12110 1019 aa4.9□□□□□ -1.63
PTPN13-201ENST00000316707 FCGR1AP12314 374 aa4.9□□□□□ -1.63
PTPN13-201ENST00000316707 MLH1P40692 756 aa4.9□□□□□ -1.63
PTPN13-201ENST00000316707 ILF2Q12905 390 aaKnown RBP4.9□□□□□ -1.63
PTPN13-201ENST00000316707 TCHHL1Q5QJ38 904 aaPredicted RBP4.9□□□□□ -1.63
PTPN13-201ENST00000316707 HEATR6Q6AI08 1181 aaKnown RBP4.9□□□□□ -1.63
PTPN13-201ENST00000316707 ZBTB49Q6ZSB9 765 aa4.9□□□□□ -1.63
PTPN13-201ENST00000316707 ZSWIM2Q8NEG5 633 aa4.9□□□□□ -1.63
PTPN13-201ENST00000316707 MAGED4Q96JG8 741 aa4.9□□□□□ -1.63
PTPN13-201ENST00000316707 DNAJC1Q96KC8 554 aaKnown RBP4.9□□□□□ -1.63
PTPN13-201ENST00000316707 CPNE1Q99829 537 aa4.9□□□□□ -1.63
PTPN13-201ENST00000316707 EIF2AQ9BY44 585 aaKnown RBP4.9□□□□□ -1.63
PTPN13-201ENST00000316707 GABBR1Q9UBS5 961 aa4.9□□□□□ -1.63
PTPN13-201ENST00000316707 IPO11Q9UI26 975 aaKnown RBP4.9□□□□□ -1.63
PTPN13-201ENST00000316707 TLK1Q9UKI8 766 aa4.9□□□□□ -1.63
PTPN13-201ENST00000316707 RIMBP2O15034 1052 aa4.9□□□□□ -1.63
PTPN13-201ENST00000316707 OGTO15294 1046 aa4.9□□□□□ -1.63
PTPN13-201ENST00000316707 CFLARO15519 480 aa4.9□□□□□ -1.63
PTPN13-201ENST00000316707 ASNSP08243 561 aa4.9□□□□□ -1.63
PTPN13-201ENST00000316707 TCF4P15884 667 aa4.9□□□□□ -1.63
PTPN13-201ENST00000316707 C21orf59P57076 290 aa4.9□□□□□ -1.63
PTPN13-201ENST00000316707 MPP3Q13368 585 aa4.9□□□□□ -1.63
PTPN13-201ENST00000316707 VPS72Q15906 364 aa4.9□□□□□ -1.63
PTPN13-201ENST00000316707 ZNF699Q32M78 642 aa4.9□□□□□ -1.63
PTPN13-201ENST00000316707 MAP7D1Q3KQU3 841 aa4.9□□□□□ -1.63
PTPN13-201ENST00000316707 KCNT1Q5JUK3 1230 aa4.9□□□□□ -1.63
PTPN13-201ENST00000316707 SLC9A4Q6AI14 798 aa4.9□□□□□ -1.63
PTPN13-201ENST00000316707 ZCCHC23Q6ZST2 131 aa4.9□□□□□ -1.63
PTPN13-201ENST00000316707 CNBD2Q96M20 576 aa4.9□□□□□ -1.63
PTPN13-201ENST00000316707 SH2D3AQ9BRG2 576 aa4.9□□□□□ -1.63
PTPN13-201ENST00000316707 ATAD3AQ9NVI7 634 aa4.9□□□□□ -1.63
PTPN13-201ENST00000316707 MAGEB16A2A368 324 aa4.89□□□□□ -1.63
PTPN13-201ENST00000316707 DPYSL4O14531 572 aa4.89□□□□□ -1.63
PTPN13-201ENST00000316707 LYPLA1O75608 230 aaPredicted RBP4.89□□□□□ -1.63
PTPN13-201ENST00000316707 CCNE2O96020 404 aa4.89□□□□□ -1.63
PTPN13-201ENST00000316707 NR3C2P08235 984 aa4.89□□□□□ -1.63
PTPN13-201ENST00000316707 HSPA1AP0DMV8 641 aaKnown RBP4.89□□□□□ -1.63
PTPN13-201ENST00000316707 HSPA1BP0DMV9 641 aaKnown RBP4.89□□□□□ -1.63
PTPN13-201ENST00000316707 CYP2C8P10632 490 aa4.89□□□□□ -1.63
PTPN13-201ENST00000316707 CYP2C9P11712 490 aa4.89□□□□□ -1.63
PTPN13-201ENST00000316707 ZNF26P17031 533 aaPredicted RBP4.89□□□□□ -1.63
PTPN13-201ENST00000316707 SLC7A1P30825 629 aa4.89□□□□□ -1.63
PTPN13-201ENST00000316707 MAGEA3P43357 314 aa4.89□□□□□ -1.63
PTPN13-201ENST00000316707 NME5P56597 212 aa4.89□□□□□ -1.63
PTPN13-201ENST00000316707 CEACAM7Q14002 265 aa4.89□□□□□ -1.63
PTPN13-201ENST00000316707 IKBKEQ14164 716 aa4.89□□□□□ -1.63
PTPN13-201ENST00000316707 EMC2Q15006 297 aa4.89□□□□□ -1.63
PTPN13-201ENST00000316707 SNX17Q15036 470 aa4.89□□□□□ -1.63
PTPN13-201ENST00000316707 FKBP1CQ5VVH2 108 aa4.89□□□□□ -1.63
PTPN13-201ENST00000316707 TTC33Q6PID6 262 aaPredicted RBP4.89□□□□□ -1.63
PTPN13-201ENST00000316707 ZBTB8OSQ8IWT0 167 aa4.89□□□□□ -1.63
PTPN13-201ENST00000316707 METTL25Q8N6Q8 603 aa4.89□□□□□ -1.63
PTPN13-201ENST00000316707 MFSD2AQ8NA29 543 aa4.89□□□□□ -1.63
PTPN13-201ENST00000316707 MINDY2Q8NBR6 621 aa4.89□□□□□ -1.63
PTPN13-201ENST00000316707 FAM151AQ8WW52 585 aa4.89□□□□□ -1.63
PTPN13-201ENST00000316707 CCDC138Q96M89 665 aa4.89□□□□□ -1.63
PTPN13-201ENST00000316707 TCF12Q99081 682 aa4.89□□□□□ -1.63
PTPN13-201ENST00000316707 PDLIM7Q9NR12 457 aa4.89□□□□□ -1.63
PTPN13-201ENST00000316707 RCOR3Q9P2K3 495 aaPredicted RBP4.89□□□□□ -1.63
PTPN13-201ENST00000316707 COQ6Q9Y2Z9 468 aa4.89□□□□□ -1.63
PTPN13-201ENST00000316707 TCRBV7S3A2A0A539 114 aa4.89□□□□□ -1.63
PTPN13-201ENST00000316707 HEATR9A2RTY3 570 aa4.89□□□□□ -1.63
PTPN13-201ENST00000316707 TRIM64CA6NLI5 447 aa4.89□□□□□ -1.63
PTPN13-201ENST00000316707 ADCY6O43306 1168 aa4.89□□□□□ -1.63
PTPN13-201ENST00000316707 CAPN15O75808 1086 aa4.89□□□□□ -1.63
PTPN13-201ENST00000316707 OCM2P0CE71 109 aa4.89□□□□□ -1.63
PTPN13-201ENST00000316707 OCMP0CE72 109 aaPredicted RBP4.89□□□□□ -1.63
PTPN13-201ENST00000316707 VDRP11473 427 aa4.89□□□□□ -1.63
PTPN13-201ENST00000316707 PSMD8P48556 350 aa4.89□□□□□ -1.63
PTPN13-201ENST00000316707 ACOT2P49753 483 aa4.89□□□□□ -1.63
PTPN13-201ENST00000316707 PSME3P61289 254 aa4.89□□□□□ -1.63
PTPN13-201ENST00000316707 NAA20P61599 178 aa4.89□□□□□ -1.63
PTPN13-201ENST00000316707 TUBA3CQ13748 450 aa4.89□□□□□ -1.63
PTPN13-201ENST00000316707 SPATS1Q496A3 300 aa4.89□□□□□ -1.63
PTPN13-201ENST00000316707 VSIG10LQ86VR7 867 aa4.89□□□□□ -1.63
PTPN13-201ENST00000316707 GABPB2Q8TAK5 448 aaPredicted RBP4.89□□□□□ -1.63
PTPN13-201ENST00000316707 TUBA1CQ9BQE3 449 aa4.89□□□□□ -1.63
PTPN13-201ENST00000316707 XPNPEP3Q9NQH7 507 aa4.89□□□□□ -1.63
PTPN13-201ENST00000316707 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.89□□□□□ -1.63
PTPN13-201ENST00000316707 SAE1Q9UBE0 346 aaPredicted RBP4.89□□□□□ -1.63
PTPN13-201ENST00000316707 SUCOQ9UBS9 1254 aaKnown RBP4.89□□□□□ -1.63
PTPN13-201ENST00000316707 ANKRD6Q9Y2G4 727 aa4.89□□□□□ -1.63
PTPN13-201ENST00000316707 GIPC1O14908 333 aa4.89□□□□□ -1.63
PTPN13-201ENST00000316707 KLHL41O60662 606 aa4.89□□□□□ -1.63
PTPN13-201ENST00000316707 ALOX5P09917 674 aa4.89□□□□□ -1.63
PTPN13-201ENST00000316707 IL1R2P27930 398 aa4.89□□□□□ -1.63
PTPN13-201ENST00000316707 RBL1P28749 1068 aa4.89□□□□□ -1.63
PTPN13-201ENST00000316707 PTGER2P43116 358 aa4.89□□□□□ -1.63
PTPN13-201ENST00000316707 FAM102AQ5T9C2 384 aaPredicted RBP4.89□□□□□ -1.63
PTPN13-201ENST00000316707 SPOPLQ6IQ16 392 aa4.89□□□□□ -1.63
PTPN13-201ENST00000316707 PPP4R4Q6NUP7 873 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms