RNA–Protein interactions for RNA: ENST00000316105.6

PCDHB9-201, Transcript of protocadherin beta 9, humanhuman

APPRIS P1 BASIC

Gene PCDHB9, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-201ENST00000316105 SYT17Q9BSW7 474 aa13.75□□□□□ -0.21
PCDHB9-201ENST00000316105 SUDS3Q9H7L9 328 aaPredicted RBP13.75□□□□□ -0.21
PCDHB9-201ENST00000316105 XPNPEP3Q9NQH7 507 aa13.75□□□□□ -0.21
PCDHB9-201ENST00000316105 THAP1Q9NVV9 213 aa13.75□□□□□ -0.21
PCDHB9-201ENST00000316105 ADAMTS5Q9UNA0 930 aa13.75□□□□□ -0.21
PCDHB9-201ENST00000316105 A0A096LPK6 155 aa13.75□□□□□ -0.21
PCDHB9-201ENST00000316105 FAM237BA0A1B0GVD1 139 aa13.75□□□□□ -0.21
PCDHB9-201ENST00000316105 FAM155BO75949 473 aa13.75□□□□□ -0.21
PCDHB9-201ENST00000316105 APOA4P06727 396 aa13.75□□□□□ -0.21
PCDHB9-201ENST00000316105 KLRC2P26717 231 aa13.75□□□□□ -0.21
PCDHB9-201ENST00000316105 PDCD2Q16342 344 aaPredicted RBP13.75□□□□□ -0.21
PCDHB9-201ENST00000316105 TMA16Q96EY4 203 aaKnown RBP13.75□□□□□ -0.21
PCDHB9-201ENST00000316105 SNX27Q96L92 541 aa13.75□□□□□ -0.21
PCDHB9-201ENST00000316105 PGLYRP2Q96PD5 576 aa13.75□□□□□ -0.21
PCDHB9-201ENST00000316105 ENO4A6NNW6 628 aa13.75□□□□□ -0.21
PCDHB9-201ENST00000316105 TPP1O14773 563 aa13.75□□□□□ -0.21
PCDHB9-201ENST00000316105 PRPF4O43172 522 aaKnown RBP eCLIP13.75□□□□□ -0.21
PCDHB9-201ENST00000316105 SLC1A6P48664 564 aa13.75□□□□□ -0.21
PCDHB9-201ENST00000316105 ATXN3P54252 364 aaPredicted RBP13.75□□□□□ -0.21
PCDHB9-201ENST00000316105 NCALDP61601 193 aa13.75□□□□□ -0.21
PCDHB9-201ENST00000316105 BST1Q10588 318 aa13.75□□□□□ -0.21
PCDHB9-201ENST00000316105 SLC25A52Q3SY17 297 aa13.75□□□□□ -0.21
PCDHB9-201ENST00000316105 TIGD7Q6NT04 549 aaPredicted RBP13.75□□□□□ -0.21
PCDHB9-201ENST00000316105 SLC26A9Q7LBE3 791 aa13.75□□□□□ -0.21
PCDHB9-201ENST00000316105 ATP6V0D2Q8N8Y2 350 aa13.75□□□□□ -0.21
PCDHB9-201ENST00000316105 PIP4K2CQ8TBX8 421 aa13.75□□□□□ -0.21
PCDHB9-201ENST00000316105 P2RY11Q96G91 374 aa13.75□□□□□ -0.21
PCDHB9-201ENST00000316105 SDCBP2Q9H190 292 aa13.75□□□□□ -0.21
PCDHB9-201ENST00000316105 EML4Q9HC35 981 aaKnown RBP13.75□□□□□ -0.21
PCDHB9-201ENST00000316105 TRHDEQ9UKU6 1024 aa13.75□□□□□ -0.21
PCDHB9-201ENST00000316105 CDYLQ9Y232 598 aa13.75□□□□□ -0.21
PCDHB9-201ENST00000316105 RREB1Q92766 1687 aa13.75□□□□□ -0.21
PCDHB9-201ENST00000316105 GLTPD2A6NH11 291 aa13.74□□□□□ -0.21
PCDHB9-201ENST00000316105 E9PBE3 544 aa13.74□□□□□ -0.21
PCDHB9-201ENST00000316105 KLHL41O60662 606 aa13.74□□□□□ -0.21
PCDHB9-201ENST00000316105 PFDN1O60925 122 aa13.74□□□□□ -0.21
PCDHB9-201ENST00000316105 STMN1P16949 149 aa13.74□□□□□ -0.21
PCDHB9-201ENST00000316105 RAB27AP51159 221 aa13.74□□□□□ -0.21
PCDHB9-201ENST00000316105 ATXN1P54253 815 aaKnown RBP13.74□□□□□ -0.21
PCDHB9-201ENST00000316105 CTXN3Q4LDR2 81 aa13.74□□□□□ -0.21
PCDHB9-201ENST00000316105 SPANXN3Q5MJ09 141 aa13.74□□□□□ -0.21
PCDHB9-201ENST00000316105 FRA10AC1Q70Z53 315 aa13.74□□□□□ -0.21
PCDHB9-201ENST00000316105 STRADAQ7RTN6 431 aa13.74□□□□□ -0.21
PCDHB9-201ENST00000316105 TAS2R42Q7RTR8 314 aa13.74□□□□□ -0.21
PCDHB9-201ENST00000316105 EFHBQ8N7U6 833 aa13.74□□□□□ -0.21
PCDHB9-201ENST00000316105 SLC44A1Q8WWI5 657 aa13.74□□□□□ -0.21
PCDHB9-201ENST00000316105 KCNK16Q96T55 309 aa13.74□□□□□ -0.21
PCDHB9-201ENST00000316105 NT5MQ9NPB1 228 aa13.74□□□□□ -0.21
PCDHB9-201ENST00000316105 ACOT9Q9Y305 439 aa13.74□□□□□ -0.21
PCDHB9-201ENST00000316105 ZC3H4Q9UPT8 1303 aaKnown RBP13.74□□□□□ -0.21
PCDHB9-201ENST00000316105 SERPINE1P05121 402 aa13.74□□□□□ -0.21
PCDHB9-201ENST00000316105 LMO2P25791 158 aa13.74□□□□□ -0.21
PCDHB9-201ENST00000316105 TUBP50607 506 aa13.74□□□□□ -0.21
PCDHB9-201ENST00000316105 PDAP1Q13442 181 aaKnown RBP13.74□□□□□ -0.21
PCDHB9-201ENST00000316105 TBCCQ15814 346 aa13.74□□□□□ -0.21
PCDHB9-201ENST00000316105 ANKRD20A4Q4UJ75 823 aa13.74□□□□□ -0.21
PCDHB9-201ENST00000316105 PCDH19Q8TAB3 1148 aa13.74□□□□□ -0.21
PCDHB9-201ENST00000316105 BLOC1S5Q8TDH9 187 aa13.74□□□□□ -0.21
PCDHB9-201ENST00000316105 RMDN2Q96LZ7 410 aa13.74□□□□□ -0.21
PCDHB9-201ENST00000316105 MECRQ9BV79 373 aa13.74□□□□□ -0.21
PCDHB9-201ENST00000316105 FAM105AQ9NUU6 356 aa13.74□□□□□ -0.21
PCDHB9-201ENST00000316105 TAGLN3Q9UI15 199 aa13.74□□□□□ -0.21
PCDHB9-201ENST00000316105 RABGEF1Q9UJ41 708 aa13.74□□□□□ -0.21
PCDHB9-201ENST00000316105 PCDHA11Q9Y5I1 949 aa13.74□□□□□ -0.21
PCDHB9-201ENST00000316105 DAB1O75553 588 aa13.74□□□□□ -0.21
PCDHB9-201ENST00000316105 XRCC4Q13426 336 aa13.74□□□□□ -0.21
PCDHB9-201ENST00000316105 CA9Q16790 459 aa13.74□□□□□ -0.21
PCDHB9-201ENST00000316105 GRTP1Q5TC63 336 aa13.74□□□□□ -0.21
PCDHB9-201ENST00000316105 CAPRIN2Q6IMN6 1127 aaKnown RBP13.74□□□□□ -0.21
PCDHB9-201ENST00000316105 UNC5AQ6ZN44 842 aa13.74□□□□□ -0.21
PCDHB9-201ENST00000316105 ANKS1BQ7Z6G8 1248 aa13.74□□□□□ -0.21
PCDHB9-201ENST00000316105 ANKRD23Q86SG2 305 aa13.74□□□□□ -0.21
PCDHB9-201ENST00000316105 FAM35AQ86V20 835 aa13.74□□□□□ -0.21
PCDHB9-201ENST00000316105 PSTKQ8IV42 348 aaKnown RBP13.74□□□□□ -0.21
PCDHB9-201ENST00000316105 TOP6BLQ8N6T0 577 aa13.74□□□□□ -0.21
PCDHB9-201ENST00000316105 CMASQ8NFW8 434 aaPredicted RBP13.74□□□□□ -0.21
PCDHB9-201ENST00000316105 CLEC4CQ8WTT0 213 aa13.74□□□□□ -0.21
PCDHB9-201ENST00000316105 APBA2Q99767 749 aa13.74□□□□□ -0.21
PCDHB9-201ENST00000316105 BCO2Q9BYV7 579 aa13.74□□□□□ -0.21
PCDHB9-201ENST00000316105 XYLT2Q9H1B5 865 aa13.74□□□□□ -0.21
PCDHB9-201ENST00000316105 TRPV6Q9H1D0 765 aa13.74□□□□□ -0.21
PCDHB9-201ENST00000316105 DCLRE1BQ9H816 532 aa13.74□□□□□ -0.21
PCDHB9-201ENST00000316105 SUN2Q9UH99 717 aa13.74□□□□□ -0.21
PCDHB9-201ENST00000316105 NENFQ9UMX5 172 aa13.74□□□□□ -0.21
PCDHB9-201ENST00000316105 MDM4O15151 490 aa13.74□□□□□ -0.21
PCDHB9-201ENST00000316105 SKAP2O75563 359 aaPredicted RBP13.74□□□□□ -0.21
PCDHB9-201ENST00000316105 HSPA8P11142 646 aaKnown RBP13.74□□□□□ -0.21
PCDHB9-201ENST00000316105 VEPH1Q14D04 833 aa13.74□□□□□ -0.21
PCDHB9-201ENST00000316105 NFE2Q16621 373 aaPredicted RBP13.74□□□□□ -0.21
PCDHB9-201ENST00000316105 FAM83EQ2M2I3 478 aa13.74□□□□□ -0.21
PCDHB9-201ENST00000316105 SCUBE1Q8IWY4 988 aa13.74□□□□□ -0.21
PCDHB9-201ENST00000316105 PYROXD2Q8N2H3 581 aa13.74□□□□□ -0.21
PCDHB9-201ENST00000316105 ARHGAP18Q8N392 663 aa13.74□□□□□ -0.21
PCDHB9-201ENST00000316105 PCSK9Q8NBP7 692 aaKnown RBP13.74□□□□□ -0.21
PCDHB9-201ENST00000316105 FAXDC2Q96IV6 333 aa13.74□□□□□ -0.21
PCDHB9-201ENST00000316105 KCTD15Q96SI1 283 aaPredicted RBP13.74□□□□□ -0.21
PCDHB9-201ENST00000316105 CPNE1Q99829 537 aa13.74□□□□□ -0.21
PCDHB9-201ENST00000316105 BTBD10Q9BSF8 475 aa13.74□□□□□ -0.21
PCDHB9-201ENST00000316105 PPEF2O14830 753 aa13.73□□□□□ -0.21
PCDHB9-201ENST00000316105 VAPBO95292 243 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms