RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 COLEC11Q9BWP8 271 aa12.8□□□□□ -0.36
RNF4-201ENST00000314289 SLC24A2Q9UI40 661 aa12.8□□□□□ -0.36
RNF4-201ENST00000314289 CFAP69A5D8W1 941 aa12.79□□□□□ -0.36
RNF4-201ENST00000314289 H3BRJ5 948 aa12.79□□□□□ -0.36
RNF4-201ENST00000314289 ZNF623O75123 536 aa12.79□□□□□ -0.36
RNF4-201ENST00000314289 ASMTLO95671 621 aa12.79□□□□□ -0.36
RNF4-201ENST00000314289 INHBAP08476 426 aa12.79□□□□□ -0.36
RNF4-201ENST00000314289 RPL9P32969 192 aaKnown RBP12.79□□□□□ -0.36
RNF4-201ENST00000314289 GCKP35557 465 aa12.79□□□□□ -0.36
RNF4-201ENST00000314289 GRIK1P39086 918 aa12.79□□□□□ -0.36
RNF4-201ENST00000314289 GPR15P49685 360 aa12.79□□□□□ -0.36
RNF4-201ENST00000314289 GATMP50440 423 aa12.79□□□□□ -0.36
RNF4-201ENST00000314289 TPI1P60174 286 aa12.79□□□□□ -0.36
RNF4-201ENST00000314289 HTRA3P83110 453 aa12.79□□□□□ -0.36
RNF4-201ENST00000314289 TRIM71Q2Q1W2 868 aaKnown RBP12.79□□□□□ -0.36
RNF4-201ENST00000314289 KLHL38Q2WGJ6 581 aa12.79□□□□□ -0.36
RNF4-201ENST00000314289 INTS6LQ5JSJ4 861 aaKnown RBP12.79□□□□□ -0.36
RNF4-201ENST00000314289 UNC5AQ6ZN44 842 aa12.79□□□□□ -0.36
RNF4-201ENST00000314289 TAC4Q86UU9 113 aa12.79□□□□□ -0.36
RNF4-201ENST00000314289 TDRPQ86YL5 185 aa12.79□□□□□ -0.36
RNF4-201ENST00000314289 PCSK9Q8NBP7 692 aaKnown RBP12.79□□□□□ -0.36
RNF4-201ENST00000314289 MICAL1Q8TDZ2 1067 aa12.79□□□□□ -0.36
RNF4-201ENST00000314289 CAPNS2Q96L46 248 aa12.79□□□□□ -0.36
RNF4-201ENST00000314289 OLFM3Q96PB7 478 aa12.79□□□□□ -0.36
RNF4-201ENST00000314289 CCDC134Q9H6E4 229 aa12.79□□□□□ -0.36
RNF4-201ENST00000314289 WDCPQ9H6R7 721 aa12.79□□□□□ -0.36
RNF4-201ENST00000314289 CNGB3Q9NQW8 809 aa12.79□□□□□ -0.36
RNF4-201ENST00000314289 ABI2Q9NYB9 513 aaPredicted RBP12.79□□□□□ -0.36
RNF4-201ENST00000314289 UBP1Q9NZI7 540 aa12.79□□□□□ -0.36
RNF4-201ENST00000314289 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.79□□□□□ -0.36
RNF4-201ENST00000314289 WDR27A2RRH5 827 aa12.79□□□□□ -0.36
RNF4-201ENST00000314289 DGKIO75912 1065 aa12.79□□□□□ -0.36
RNF4-201ENST00000314289 ZFXP17010 805 aaPredicted RBP12.79□□□□□ -0.36
RNF4-201ENST00000314289 EPHB2P29323 1055 aa12.79□□□□□ -0.36
RNF4-201ENST00000314289 SLC39A12Q504Y0 691 aa12.79□□□□□ -0.36
RNF4-201ENST00000314289 RWDD4Q6NW29 188 aaKnown RBP12.79□□□□□ -0.36
RNF4-201ENST00000314289 BZW1Q7L1Q6 419 aaKnown RBP12.79□□□□□ -0.36
RNF4-201ENST00000314289 PID1Q7Z2X4 250 aa12.79□□□□□ -0.36
RNF4-201ENST00000314289 ZNF570Q96NI8 536 aa12.79□□□□□ -0.36
RNF4-201ENST00000314289 APOL2Q9BQE5 337 aa12.79□□□□□ -0.36
RNF4-201ENST00000314289 TTLL3Q9Y4R7 772 aa12.79□□□□□ -0.36
RNF4-201ENST00000314289 TET1Q8NFU7 2136 aa12.78□□□□□ -0.36
RNF4-201ENST00000314289 TYROBPO43914 113 aa12.78□□□□□ -0.36
RNF4-201ENST00000314289 GCATO75600 419 aa12.78□□□□□ -0.36
RNF4-201ENST00000314289 SOAT2O75908 522 aa12.78□□□□□ -0.36
RNF4-201ENST00000314289 SUN1O94901 812 aa12.78□□□□□ -0.36
RNF4-201ENST00000314289 TOP3BO95985 862 aaKnown RBP12.78□□□□□ -0.36
RNF4-201ENST00000314289 PYGBP11216 843 aa12.78□□□□□ -0.36
RNF4-201ENST00000314289 NR2C2P49116 596 aa12.78□□□□□ -0.36
RNF4-201ENST00000314289 ARPP19P56211 112 aa12.78□□□□□ -0.36
RNF4-201ENST00000314289 IL9RQ01113 521 aa12.78□□□□□ -0.36
RNF4-201ENST00000314289 RAB41Q5JT25 222 aa12.78□□□□□ -0.36
RNF4-201ENST00000314289 CLLU1OSQ5K130 101 aa12.78□□□□□ -0.36
RNF4-201ENST00000314289 HHATQ5VTY9 493 aa12.78□□□□□ -0.36
RNF4-201ENST00000314289 ZNF567Q8N184 647 aa12.78□□□□□ -0.36
RNF4-201ENST00000314289 DENND1AQ8TEH3 1009 aa12.78□□□□□ -0.36
RNF4-201ENST00000314289 LINC01599Q8WXQ3 324 aa12.78□□□□□ -0.36
RNF4-201ENST00000314289 PITPNM3Q9BZ71 974 aa12.78□□□□□ -0.36
RNF4-201ENST00000314289 OR12D3Q9UGF7 316 aa12.78□□□□□ -0.36
RNF4-201ENST00000314289 SRRDQ9UH36 339 aa12.78□□□□□ -0.36
RNF4-201ENST00000314289 CCDC78A2IDD5 438 aa12.78□□□□□ -0.36
RNF4-201ENST00000314289 NDC80O14777 642 aa12.78□□□□□ -0.36
RNF4-201ENST00000314289 MOCS2O96007 188 aaPredicted RBP12.78□□□□□ -0.36
RNF4-201ENST00000314289 CCNHP51946 323 aaPredicted RBP12.78□□□□□ -0.36
RNF4-201ENST00000314289 GRIK3Q13003 919 aa12.78□□□□□ -0.36
RNF4-201ENST00000314289 RIPK1Q13546 671 aa12.78□□□□□ -0.36
RNF4-201ENST00000314289 DDR2Q16832 855 aa12.78□□□□□ -0.36
RNF4-201ENST00000314289 USP33Q8TEY7 942 aa12.78□□□□□ -0.36
RNF4-201ENST00000314289 MZB1Q8WU39 189 aa12.78□□□□□ -0.36
RNF4-201ENST00000314289 ACBD6Q9BR61 282 aa12.78□□□□□ -0.36
RNF4-201ENST00000314289 FAM167BQ9BTA0 163 aa12.78□□□□□ -0.36
RNF4-201ENST00000314289 FBXW11Q9UKB1 542 aa12.78□□□□□ -0.36
RNF4-201ENST00000314289 A0A0A0MRY4 1105 aa12.77□□□□□ -0.36
RNF4-201ENST00000314289 MT-ND3P03897 115 aa12.77□□□□□ -0.36
RNF4-201ENST00000314289 CSH1P0DML2 217 aa12.77□□□□□ -0.36
RNF4-201ENST00000314289 CSH2P0DML3 217 aa12.77□□□□□ -0.36
RNF4-201ENST00000314289 GRK4P32298 578 aa12.77□□□□□ -0.36
RNF4-201ENST00000314289 YWHAHQ04917 246 aaPredicted RBP12.77□□□□□ -0.36
RNF4-201ENST00000314289 WASHC5Q12768 1159 aa12.77□□□□□ -0.36
RNF4-201ENST00000314289 NOGQ13253 232 aa12.77□□□□□ -0.36
RNF4-201ENST00000314289 DPYSQ14117 519 aa12.77□□□□□ -0.36
RNF4-201ENST00000314289 SEPT7Q16181 437 aaKnown RBP12.77□□□□□ -0.36
RNF4-201ENST00000314289 BNIPLQ7Z465 357 aa12.77□□□□□ -0.36
RNF4-201ENST00000314289 TTC9BQ8N6N2 239 aa12.77□□□□□ -0.36
RNF4-201ENST00000314289 PGBD4Q96DM1 585 aa12.77□□□□□ -0.36
RNF4-201ENST00000314289 SIGLEC10Q96LC7 697 aa12.77□□□□□ -0.36
RNF4-201ENST00000314289 RMDN2Q96LZ7 410 aa12.77□□□□□ -0.36
RNF4-201ENST00000314289 MAGEB18Q96M61 343 aa12.77□□□□□ -0.36
RNF4-201ENST00000314289 SPATA13Q96N96 652 aa12.77□□□□□ -0.36
RNF4-201ENST00000314289 SLC13A1Q9BZW2 595 aa12.77□□□□□ -0.36
RNF4-201ENST00000314289 KLHL8Q9P2G9 620 aaPredicted RBP12.77□□□□□ -0.36
RNF4-201ENST00000314289 ACTL7BQ9Y614 415 aa12.77□□□□□ -0.36
RNF4-201ENST00000314289 TRIM49D1C9J1S8 452 aa12.77□□□□□ -0.37
RNF4-201ENST00000314289 KIF3CO14782 793 aa12.77□□□□□ -0.37
RNF4-201ENST00000314289 LRIG2O94898 1065 aa12.77□□□□□ -0.37
RNF4-201ENST00000314289 FBXO21O94952 628 aa12.77□□□□□ -0.37
RNF4-201ENST00000314289 ALDH1A1P00352 501 aa12.77□□□□□ -0.37
RNF4-201ENST00000314289 MGAT1P26572 445 aa12.77□□□□□ -0.37
RNF4-201ENST00000314289 RAB27AP51159 221 aa12.77□□□□□ -0.37
RNF4-201ENST00000314289 MROH9Q5TGP6 573 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms