RNA–Protein interactions for RNA: ENST00000313401.3

CDK5R1-201, Transcript of cyclin dependent kinase 5 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5R1, Length 4,325 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5R1-201ENST00000313401 SPATA13Q96N96 652 aa18.86■□□□□ 0.61
CDK5R1-201ENST00000313401 IPO11Q9UI26 975 aaKnown RBP18.86■□□□□ 0.61
CDK5R1-201ENST00000313401 CASQ2O14958 399 aaPredicted RBP18.86■□□□□ 0.61
CDK5R1-201ENST00000313401 VAPBO95292 243 aa18.86■□□□□ 0.61
CDK5R1-201ENST00000313401 ZBTB48P10074 688 aaPredicted RBP18.86■□□□□ 0.61
CDK5R1-201ENST00000313401 DCAF4L1Q3SXM0 396 aa18.86■□□□□ 0.61
CDK5R1-201ENST00000313401 WLSQ5T9L3 541 aa18.86■□□□□ 0.61
CDK5R1-201ENST00000313401 ABTB1Q969K4 478 aaPredicted RBP18.86■□□□□ 0.61
CDK5R1-201ENST00000313401 EME1Q96AY2 570 aa18.86■□□□□ 0.61
CDK5R1-201ENST00000313401 CCDC97Q96F63 343 aaPredicted RBP18.86■□□□□ 0.61
CDK5R1-201ENST00000313401 P2RY11Q96G91 374 aa18.86■□□□□ 0.61
CDK5R1-201ENST00000313401 ZNF184Q99676 751 aaPredicted RBP18.86■□□□□ 0.61
CDK5R1-201ENST00000313401 OMDQ99983 421 aa18.86■□□□□ 0.61
CDK5R1-201ENST00000313401 SIX4Q9UIU6 781 aa18.86■□□□□ 0.61
CDK5R1-201ENST00000313401 MAGEA13PA6NCF6 341 aa18.85■□□□□ 0.61
CDK5R1-201ENST00000313401 TRDMT1O14717 391 aaKnown RBP18.85■□□□□ 0.61
CDK5R1-201ENST00000313401 PEX11AO75192 247 aa18.85■□□□□ 0.61
CDK5R1-201ENST00000313401 PAMP19021 973 aa18.85■□□□□ 0.61
CDK5R1-201ENST00000313401 GMPRP36959 345 aa18.85■□□□□ 0.61
CDK5R1-201ENST00000313401 MBTD1Q05BQ5 628 aa18.85■□□□□ 0.61
CDK5R1-201ENST00000313401 RARS2Q5T160 578 aaKnown RBP18.85■□□□□ 0.61
CDK5R1-201ENST00000313401 CSPG4P5Q96PW8 444 aa18.85■□□□□ 0.61
CDK5R1-201ENST00000313401 MROH8Q9H579 483 aa18.85■□□□□ 0.61
CDK5R1-201ENST00000313401 PDZD7Q9H5P4 517 aa18.85■□□□□ 0.61
CDK5R1-201ENST00000313401 TCF7L2Q9NQB0 619 aa18.85■□□□□ 0.61
CDK5R1-201ENST00000313401 V9GYQ6 96 aa18.85■□□□□ 0.61
CDK5R1-201ENST00000313401 USP2O75604 605 aaPredicted RBP18.85■□□□□ 0.61
CDK5R1-201ENST00000313401 SNX32Q86XE0 403 aa18.85■□□□□ 0.61
CDK5R1-201ENST00000313401 ULK2Q8IYT8 1036 aa18.85■□□□□ 0.61
CDK5R1-201ENST00000313401 MAGEC3Q8TD91 643 aa18.85■□□□□ 0.61
CDK5R1-201ENST00000313401 PHF21BQ96EK2 531 aa18.85■□□□□ 0.61
CDK5R1-201ENST00000313401 ARHGEF38Q9NXL2 777 aa18.85■□□□□ 0.61
CDK5R1-201ENST00000313401 LAMB1P07942 1786 aa18.85■□□□□ 0.61
CDK5R1-201ENST00000313401 ITGA2BP08514 1039 aa18.85■□□□□ 0.61
CDK5R1-201ENST00000313401 TMEM259Q4ZIN3 620 aa18.85■□□□□ 0.61
CDK5R1-201ENST00000313401 SPDYAQ5MJ70 313 aa18.85■□□□□ 0.61
CDK5R1-201ENST00000313401 FNIP1Q8TF40 1166 aa18.85■□□□□ 0.61
CDK5R1-201ENST00000313401 PABPN1LA6NDY0 278 aaKnown RBP18.84■□□□□ 0.61
CDK5R1-201ENST00000313401 LMO2P25791 158 aa18.84■□□□□ 0.61
CDK5R1-201ENST00000313401 LCLAT1Q6UWP7 414 aa18.84■□□□□ 0.61
CDK5R1-201ENST00000313401 PLPPR4Q7Z2D5 763 aa18.84■□□□□ 0.61
CDK5R1-201ENST00000313401 EIF2AQ9BY44 585 aaKnown RBP18.84■□□□□ 0.61
CDK5R1-201ENST00000313401 PAPOLBQ9NRJ5 636 aaKnown RBP18.84■□□□□ 0.61
CDK5R1-201ENST00000313401 BTAF1O14981 1849 aa18.84■□□□□ 0.61
CDK5R1-201ENST00000313401 COL22A1Q8NFW1 1626 aaPredicted RBP18.84■□□□□ 0.61
CDK5R1-201ENST00000313401 BNIP3LO60238 219 aa18.84■□□□□ 0.61
CDK5R1-201ENST00000313401 ATP6V1C1P21283 382 aa18.84■□□□□ 0.61
CDK5R1-201ENST00000313401 SERPINB8P50452 374 aa18.84■□□□□ 0.61
CDK5R1-201ENST00000313401 KPNA2P52292 529 aaKnown RBP18.84■□□□□ 0.61
CDK5R1-201ENST00000313401 BEX3Q00994 111 aa18.84■□□□□ 0.61
CDK5R1-201ENST00000313401 CSHL1Q14406 222 aa18.84■□□□□ 0.61
CDK5R1-201ENST00000313401 CDHR3Q6ZTQ4 885 aa18.84■□□□□ 0.61
CDK5R1-201ENST00000313401 CMASQ8NFW8 434 aaPredicted RBP18.84■□□□□ 0.61
CDK5R1-201ENST00000313401 PGLYRP2Q96PD5 576 aa18.84■□□□□ 0.61
CDK5R1-201ENST00000313401 GCNAQ96QF7 691 aa18.84■□□□□ 0.61
CDK5R1-201ENST00000313401 WDR55Q9H6Y2 383 aaPredicted RBP18.84■□□□□ 0.61
CDK5R1-201ENST00000313401 MFHAS1Q9Y4C4 1052 aa18.84■□□□□ 0.61
CDK5R1-201ENST00000313401 RNF103-CHMP3A0A140T963 221 aa18.84■□□□□ 0.61
CDK5R1-201ENST00000313401 DPPA5A6NC42 116 aa18.84■□□□□ 0.61
CDK5R1-201ENST00000313401 DNAJC6O75061 913 aa18.84■□□□□ 0.61
CDK5R1-201ENST00000313401 RAG1P15918 1043 aa18.84■□□□□ 0.61
CDK5R1-201ENST00000313401 RNF220Q5VTB9 566 aa18.84■□□□□ 0.61
CDK5R1-201ENST00000313401 KCNMB4Q86W47 210 aa18.84■□□□□ 0.61
CDK5R1-201ENST00000313401 ZSCAN18Q8TBC5 510 aaPredicted RBP18.84■□□□□ 0.61
CDK5R1-201ENST00000313401 CDYLQ9Y232 598 aa18.84■□□□□ 0.61
CDK5R1-201ENST00000313401 DTNAQ9Y4J8 743 aa18.84■□□□□ 0.61
CDK5R1-201ENST00000313401 MFSD11O43934 449 aa18.83■□□□□ 0.61
CDK5R1-201ENST00000313401 BPGMP07738 259 aa18.83■□□□□ 0.61
CDK5R1-201ENST00000313401 CCDC15Q0P6D6 951 aa18.83■□□□□ 0.61
CDK5R1-201ENST00000313401 C4orf22Q6V702 233 aa18.83■□□□□ 0.61
CDK5R1-201ENST00000313401 ILDR2Q71H61 639 aa18.83■□□□□ 0.61
CDK5R1-201ENST00000313401 RAB44Q7Z6P3 723 aaPredicted RBP18.83■□□□□ 0.61
CDK5R1-201ENST00000313401 WDR60Q8WVS4 1066 aa18.83■□□□□ 0.61
CDK5R1-201ENST00000313401 SP110Q9HB58 689 aa18.83■□□□□ 0.61
CDK5R1-201ENST00000313401 EFR3BQ9Y2G0 817 aa18.83■□□□□ 0.61
CDK5R1-201ENST00000313401 EPHA3P29320 983 aa18.83■□□□□ 0.61
CDK5R1-201ENST00000313401 YWHAHQ04917 246 aaPredicted RBP18.83■□□□□ 0.61
CDK5R1-201ENST00000313401 SEL1L3Q68CR1 1132 aa18.83■□□□□ 0.61
CDK5R1-201ENST00000313401 CGB2Q6NT52 195 aa18.83■□□□□ 0.61
CDK5R1-201ENST00000313401 PACS1Q6VY07 963 aa18.83■□□□□ 0.61
CDK5R1-201ENST00000313401 PPHLN1Q8NEY8 458 aaKnown RBP18.83■□□□□ 0.61
CDK5R1-201ENST00000313401 UCMAQ8WVF2 138 aa18.83■□□□□ 0.61
CDK5R1-201ENST00000313401 NMD3Q96D46 503 aaKnown RBP18.83■□□□□ 0.61
CDK5R1-201ENST00000313401 PTPRHQ9HD43 1115 aa18.83■□□□□ 0.61
CDK5R1-201ENST00000313401 NOL3O60936 208 aaKnown RBP18.83■□□□□ 0.6
CDK5R1-201ENST00000313401 ERCC2P18074 760 aa18.83■□□□□ 0.6
CDK5R1-201ENST00000313401 PGAM1P18669 254 aa18.83■□□□□ 0.6
CDK5R1-201ENST00000313401 GRK2P25098 689 aa18.83■□□□□ 0.6
CDK5R1-201ENST00000313401 ICAM3P32942 547 aa18.83■□□□□ 0.6
CDK5R1-201ENST00000313401 TSPY1Q01534 308 aa18.83■□□□□ 0.6
CDK5R1-201ENST00000313401 DLG2Q15700 870 aa18.83■□□□□ 0.6
CDK5R1-201ENST00000313401 CERCAMQ5T4B2 595 aa18.83■□□□□ 0.6
CDK5R1-201ENST00000313401 PTAR1Q7Z6K3 402 aaPredicted RBP18.83■□□□□ 0.6
CDK5R1-201ENST00000313401 PDZD8Q8NEN9 1154 aa18.83■□□□□ 0.6
CDK5R1-201ENST00000313401 CERS2Q96G23 380 aa18.83■□□□□ 0.6
CDK5R1-201ENST00000313401 CDRT15Q96T59 188 aa18.83■□□□□ 0.6
CDK5R1-201ENST00000313401 FICDQ9BVA6 458 aa18.83■□□□□ 0.6
CDK5R1-201ENST00000313401 UPF3AQ9H1J1 476 aaKnown RBP18.83■□□□□ 0.6
CDK5R1-201ENST00000313401 APPL1Q9UKG1 709 aa18.83■□□□□ 0.6
CDK5R1-201ENST00000313401 TYROBPO43914 113 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms