RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 FNDC5Q8NAU1 212 aa15.82■□□□□ 0.12
HCFC1-201ENST00000310441 MFHAS1Q9Y4C4 1052 aa15.82■□□□□ 0.12
HCFC1-201ENST00000310441 RPS6KA4O75676 772 aa15.81■□□□□ 0.12
HCFC1-201ENST00000310441 PPIDQ08752 370 aaKnown RBP15.81■□□□□ 0.12
HCFC1-201ENST00000310441 PKN1Q16512 942 aa15.81■□□□□ 0.12
HCFC1-201ENST00000310441 CYP20A1Q6UW02 462 aa15.81■□□□□ 0.12
HCFC1-201ENST00000310441 BRINP3Q76B58 766 aa15.81■□□□□ 0.12
HCFC1-201ENST00000310441 ZNF513Q8N8E2 541 aaPredicted RBP15.81■□□□□ 0.12
HCFC1-201ENST00000310441 MCOLN3Q8TDD5 553 aa15.81■□□□□ 0.12
HCFC1-201ENST00000310441 ZNF512BQ96KM6 892 aaPredicted RBP15.81■□□□□ 0.12
HCFC1-201ENST00000310441 TRIM66O15016 1216 aa15.81■□□□□ 0.12
HCFC1-201ENST00000310441 NAMPTP43490 491 aa15.81■□□□□ 0.12
HCFC1-201ENST00000310441 GDPD5Q8WTR4 605 aa15.81■□□□□ 0.12
HCFC1-201ENST00000310441 KCNB2Q92953 911 aa15.81■□□□□ 0.12
HCFC1-201ENST00000310441 CYP3A43Q9HB55 503 aa15.81■□□□□ 0.12
HCFC1-201ENST00000310441 PCDH9Q9HC56 1237 aa15.81■□□□□ 0.12
HCFC1-201ENST00000310441 THG1LQ9NWX6 298 aaKnown RBP15.81■□□□□ 0.12
HCFC1-201ENST00000310441 MYH7BA7E2Y1 1941 aa15.81■□□□□ 0.12
HCFC1-201ENST00000310441 PTSQ03393 145 aa15.81■□□□□ 0.12
HCFC1-201ENST00000310441 MGAT5Q09328 741 aa15.81■□□□□ 0.12
HCFC1-201ENST00000310441 AGMOQ6ZNB7 445 aa15.81■□□□□ 0.12
HCFC1-201ENST00000310441 TMC2Q8TDI7 906 aa15.81■□□□□ 0.12
HCFC1-201ENST00000310441 ATXN2LQ8WWM7 1075 aaKnown RBP15.81■□□□□ 0.12
HCFC1-201ENST00000310441 ABI2Q9NYB9 513 aaPredicted RBP15.81■□□□□ 0.12
HCFC1-201ENST00000310441 NCF1BA6NI72 391 aaPredicted RBP15.81■□□□□ 0.12
HCFC1-201ENST00000310441 TTLL13PA6NNM8 815 aa15.81■□□□□ 0.12
HCFC1-201ENST00000310441 NCF1CA8MVU1 366 aaPredicted RBP15.81■□□□□ 0.12
HCFC1-201ENST00000310441 OR6A2O95222 327 aa15.81■□□□□ 0.12
HCFC1-201ENST00000310441 KCNH1O95259 989 aa15.81■□□□□ 0.12
HCFC1-201ENST00000310441 NCF1P14598 390 aaPredicted RBP15.81■□□□□ 0.12
HCFC1-201ENST00000310441 FASTKQ14296 549 aaKnown RBP15.81■□□□□ 0.12
HCFC1-201ENST00000310441 INSCQ1MX18 579 aa15.81■□□□□ 0.12
HCFC1-201ENST00000310441 CBWD2Q8IUF1 395 aa15.81■□□□□ 0.12
HCFC1-201ENST00000310441 BBS4Q96RK4 519 aa15.81■□□□□ 0.12
HCFC1-201ENST00000310441 PRDX5P30044 214 aa15.81■□□□□ 0.12
HCFC1-201ENST00000310441 CXXC5Q7LFL8 322 aaKnown RBP15.81■□□□□ 0.12
HCFC1-201ENST00000310441 POLR1BQ9H9Y6 1135 aa15.81■□□□□ 0.12
HCFC1-201ENST00000310441 TLR8Q9NR97 1041 aaKnown RBP15.81■□□□□ 0.12
HCFC1-201ENST00000310441 FAM92AA1XBS5 289 aa15.81■□□□□ 0.12
HCFC1-201ENST00000310441 AP1G2O75843 785 aa15.81■□□□□ 0.12
HCFC1-201ENST00000310441 CYP1A1P04798 512 aaPredicted RBP15.81■□□□□ 0.12
HCFC1-201ENST00000310441 OGNP20774 298 aaKnown RBP15.81■□□□□ 0.12
HCFC1-201ENST00000310441 ITFG1Q8TB96 612 aa15.81■□□□□ 0.12
HCFC1-201ENST00000310441 SPATA31E1Q6ZUB1 1445 aa15.81■□□□□ 0.12
HCFC1-201ENST00000310441 FCHO2Q0JRZ9 810 aa15.81■□□□□ 0.12
HCFC1-201ENST00000310441 FAM126BQ8IXS8 530 aa15.81■□□□□ 0.12
HCFC1-201ENST00000310441 SLC25A23Q9BV35 468 aa15.81■□□□□ 0.12
HCFC1-201ENST00000310441 WDR12Q9GZL7 423 aaKnown RBP15.81■□□□□ 0.12
HCFC1-201ENST00000310441 ZFYVE28Q9HCC9 887 aa15.81■□□□□ 0.12
HCFC1-201ENST00000310441 AREL1O15033 823 aa15.8■□□□□ 0.12
HCFC1-201ENST00000310441 SERPINF2P08697 491 aa15.8■□□□□ 0.12
HCFC1-201ENST00000310441 PEX6Q13608 980 aa15.8■□□□□ 0.12
HCFC1-201ENST00000310441 SUSD4Q5VX71 490 aa15.8■□□□□ 0.12
HCFC1-201ENST00000310441 LMBRD2Q68DH5 695 aaPredicted RBP15.8■□□□□ 0.12
HCFC1-201ENST00000310441 ANAPC2Q9UJX6 822 aa15.8■□□□□ 0.12
HCFC1-201ENST00000310441 CROTQ9UKG9 612 aa15.8■□□□□ 0.12
HCFC1-201ENST00000310441 USP32Q8NFA0 1604 aa15.8■□□□□ 0.12
HCFC1-201ENST00000310441 C21orf2O43822 256 aa15.8■□□□□ 0.12
HCFC1-201ENST00000310441 MTA2O94776 668 aa15.8■□□□□ 0.12
HCFC1-201ENST00000310441 SPPL2AQ8TCT8 520 aa15.8■□□□□ 0.12
HCFC1-201ENST00000310441 CHCHD6Q9BRQ6 235 aa15.8■□□□□ 0.12
HCFC1-201ENST00000310441 CELF4Q9BZC1 486 aaKnown RBP15.8■□□□□ 0.12
HCFC1-201ENST00000310441 TDRD3Q9H7E2 651 aaKnown RBP15.8■□□□□ 0.12
HCFC1-201ENST00000310441 TMBIM4Q9HC24 238 aa15.8■□□□□ 0.12
HCFC1-201ENST00000310441 URB1O60287 2271 aaKnown RBP15.8■□□□□ 0.12
HCFC1-201ENST00000310441 KPNA5O15131 536 aa15.8■□□□□ 0.12
HCFC1-201ENST00000310441 CLOCKO15516 846 aa15.8■□□□□ 0.12
HCFC1-201ENST00000310441 ADCY6O43306 1168 aa15.8■□□□□ 0.12
HCFC1-201ENST00000310441 TPP2P29144 1249 aaPredicted RBP15.8■□□□□ 0.12
HCFC1-201ENST00000310441 CACNA2D1P54289 1103 aa15.8■□□□□ 0.12
HCFC1-201ENST00000310441 CDH17Q12864 832 aa15.8■□□□□ 0.12
HCFC1-201ENST00000310441 SBK1Q52WX2 424 aa15.8■□□□□ 0.12
HCFC1-201ENST00000310441 C8orf59Q8N0T1 100 aaPredicted RBP15.8■□□□□ 0.12
HCFC1-201ENST00000310441 A1CFQ9NQ94 594 aaKnown RBP15.8■□□□□ 0.12
HCFC1-201ENST00000310441 SLC26A2P50443 739 aa15.8■□□□□ 0.12
HCFC1-201ENST00000310441 EPHB3P54753 998 aa15.8■□□□□ 0.12
HCFC1-201ENST00000310441 CCDC80Q76M96 950 aa15.8■□□□□ 0.12
HCFC1-201ENST00000310441 SRBD1Q8N5C6 995 aaKnown RBP15.8■□□□□ 0.12
HCFC1-201ENST00000310441 EEF1AKMT1Q8WVE0 214 aa15.8■□□□□ 0.12
HCFC1-201ENST00000310441 CRELD1Q96HD1 420 aa15.8■□□□□ 0.12
HCFC1-201ENST00000310441 PNKPQ96T60 521 aa15.8■□□□□ 0.12
HCFC1-201ENST00000310441 TRHDEQ9UKU6 1024 aa15.8■□□□□ 0.12
HCFC1-201ENST00000310441 PLAGL2Q9UPG8 496 aa15.8■□□□□ 0.12
HCFC1-201ENST00000310441 C17orf102A2RUQ5 167 aa15.8■□□□□ 0.12
HCFC1-201ENST00000310441 CBFA2T3O75081 653 aa15.8■□□□□ 0.12
HCFC1-201ENST00000310441 MYCP01106 439 aaPredicted RBP15.8■□□□□ 0.12
HCFC1-201ENST00000310441 FBXO39Q8N4B4 442 aa15.8■□□□□ 0.12
HCFC1-201ENST00000310441 CCDC59Q9P031 241 aaKnown RBP15.8■□□□□ 0.12
HCFC1-201ENST00000310441 E2F8A0AVK6 867 aa15.8■□□□□ 0.12
HCFC1-201ENST00000310441 GSG1L2A8MUP6 293 aa15.8■□□□□ 0.12
HCFC1-201ENST00000310441 KHDRBS3O75525 346 aaKnown RBP15.8■□□□□ 0.12
HCFC1-201ENST00000310441 CPSF4O95639 269 aaKnown RBP15.8■□□□□ 0.12
HCFC1-201ENST00000310441 NEK3P51956 506 aa15.8■□□□□ 0.12
HCFC1-201ENST00000310441 NFE2Q16621 373 aaPredicted RBP15.8■□□□□ 0.12
HCFC1-201ENST00000310441 NECAB2Q7Z6G3 386 aa15.8■□□□□ 0.12
HCFC1-201ENST00000310441 NPHP3-ACAD11A0A0J9YXS1 232 aa15.8■□□□□ 0.12
HCFC1-201ENST00000310441 CYP2A6P11509 494 aaPredicted RBP15.8■□□□□ 0.12
HCFC1-201ENST00000310441 ZNF7P17097 686 aaPredicted RBP15.8■□□□□ 0.12
HCFC1-201ENST00000310441 CDC42P60953 191 aa15.8■□□□□ 0.12
HCFC1-201ENST00000310441 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms