RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 SMNDC1O75940 238 aaKnown RBP eCLIP13.45□□□□□ -0.26
SNED1-201ENST00000310397 ADGRF2Q8IZF7 708 aa13.45□□□□□ -0.26
SNED1-201ENST00000310397 BHLHE22Q8NFJ8 381 aaPredicted RBP13.45□□□□□ -0.26
SNED1-201ENST00000310397 UBXN6Q9BZV1 441 aa13.45□□□□□ -0.26
SNED1-201ENST00000310397 UTP6Q9NYH9 597 aaKnown RBP13.45□□□□□ -0.26
SNED1-201ENST00000310397 MYBL2P10244 700 aa13.45□□□□□ -0.26
SNED1-201ENST00000310397 RENBPP51606 427 aa13.45□□□□□ -0.26
SNED1-201ENST00000310397 POLD3Q15054 466 aaPredicted RBP13.45□□□□□ -0.26
SNED1-201ENST00000310397 ADHFE1Q8IWW8 467 aa13.45□□□□□ -0.26
SNED1-201ENST00000310397 LINC00116Q8NCU8 138 aa13.45□□□□□ -0.26
SNED1-201ENST00000310397 CENPXA8MT69 81 aa13.45□□□□□ -0.26
SNED1-201ENST00000310397 DPYSL4O14531 572 aa13.45□□□□□ -0.26
SNED1-201ENST00000310397 POU6F1Q14863 301 aa13.45□□□□□ -0.26
SNED1-201ENST00000310397 SLC9A9Q8IVB4 645 aa13.45□□□□□ -0.26
SNED1-201ENST00000310397 PHF21BQ96EK2 531 aa13.45□□□□□ -0.26
SNED1-201ENST00000310397 A0A0B4J269 797 aa13.44□□□□□ -0.26
SNED1-201ENST00000310397 SIGLEC16A6NMB1 481 aa13.44□□□□□ -0.26
SNED1-201ENST00000310397 MRASO14807 208 aa13.44□□□□□ -0.26
SNED1-201ENST00000310397 ENTPD5O75356 428 aa13.44□□□□□ -0.26
SNED1-201ENST00000310397 WBP4O75554 376 aaKnown RBP13.44□□□□□ -0.26
SNED1-201ENST00000310397 ACO1P21399 889 aaKnown RBP13.44□□□□□ -0.26
SNED1-201ENST00000310397 RPL14P50914 215 aaKnown RBP13.44□□□□□ -0.26
SNED1-201ENST00000310397 CASP7P55210 303 aa13.44□□□□□ -0.26
SNED1-201ENST00000310397 TSNQ15631 228 aaKnown RBP13.44□□□□□ -0.26
SNED1-201ENST00000310397 ALLCQ8N6M5 410 aa13.44□□□□□ -0.26
SNED1-201ENST00000310397 KLRC4O43908 158 aa13.44□□□□□ -0.26
SNED1-201ENST00000310397 TRIQKQ629K1 86 aa13.44□□□□□ -0.26
SNED1-201ENST00000310397 FAM81AQ8TBF8 368 aa13.44□□□□□ -0.26
SNED1-201ENST00000310397 PTCD3Q96EY7 689 aaKnown RBP13.44□□□□□ -0.26
SNED1-201ENST00000310397 OSBPL11Q9BXB4 747 aa13.44□□□□□ -0.26
SNED1-201ENST00000310397 FBXO28Q9NVF7 368 aa13.44□□□□□ -0.26
SNED1-201ENST00000310397 MGAT4DA6NG13 374 aa13.44□□□□□ -0.26
SNED1-201ENST00000310397 CAP2P40123 477 aa13.44□□□□□ -0.26
SNED1-201ENST00000310397 PBX1P40424 430 aa13.44□□□□□ -0.26
SNED1-201ENST00000310397 MMP14P50281 582 aa13.44□□□□□ -0.26
SNED1-201ENST00000310397 ST8SIA6P61647 398 aa13.44□□□□□ -0.26
SNED1-201ENST00000310397 TOP3AQ13472 1001 aaPredicted RBP13.44□□□□□ -0.26
SNED1-201ENST00000310397 ADGRA1Q86SQ6 560 aa13.44□□□□□ -0.26
SNED1-201ENST00000310397 CYLDQ9NQC7 956 aa13.44□□□□□ -0.26
SNED1-201ENST00000310397 RGS18Q9NS28 235 aa13.44□□□□□ -0.26
SNED1-201ENST00000310397 CACNA2D2Q9NY47 1150 aa13.44□□□□□ -0.26
SNED1-201ENST00000310397 PRPF19Q9UMS4 504 aaKnown RBP13.44□□□□□ -0.26
SNED1-201ENST00000310397 A0A0U1RQJ8 604 aa13.44□□□□□ -0.26
SNED1-201ENST00000310397 RBAK-RBAKDNI3L0D1 243 aa13.44□□□□□ -0.26
SNED1-201ENST00000310397 CCDC130P13994 396 aa13.44□□□□□ -0.26
SNED1-201ENST00000310397 MGAT1P26572 445 aa13.44□□□□□ -0.26
SNED1-201ENST00000310397 CHI3L1P36222 383 aaPredicted RBP13.44□□□□□ -0.26
SNED1-201ENST00000310397 IL12RB1P42701 662 aa13.44□□□□□ -0.26
SNED1-201ENST00000310397 TRIM25Q14258 630 aaKnown RBP13.44□□□□□ -0.26
SNED1-201ENST00000310397 TDRD10Q5VZ19 366 aaKnown RBP13.44□□□□□ -0.26
SNED1-201ENST00000310397 STK32CQ86UX6 486 aa13.44□□□□□ -0.26
SNED1-201ENST00000310397 TMEM39BQ9GZU3 492 aa13.44□□□□□ -0.26
SNED1-201ENST00000310397 TSPAN16Q9UKR8 245 aa13.44□□□□□ -0.26
SNED1-201ENST00000310397 ROBO3Q96MS0 1386 aa13.44□□□□□ -0.26
SNED1-201ENST00000310397 SERPIND1P05546 499 aa13.44□□□□□ -0.26
SNED1-201ENST00000310397 KDELR1P24390 212 aa13.44□□□□□ -0.26
SNED1-201ENST00000310397 NAA20P61599 178 aa13.44□□□□□ -0.26
SNED1-201ENST00000310397 TMEM62Q0P6H9 643 aa13.44□□□□□ -0.26
SNED1-201ENST00000310397 LACTB2Q53H82 288 aaPredicted RBP13.44□□□□□ -0.26
SNED1-201ENST00000310397 STYK1Q6J9G0 422 aa13.44□□□□□ -0.26
SNED1-201ENST00000310397 LENG1Q96BZ8 264 aaPredicted RBP13.44□□□□□ -0.26
SNED1-201ENST00000310397 FANCEQ9HB96 536 aa13.44□□□□□ -0.26
SNED1-201ENST00000310397 AK5Q9Y6K8 562 aa13.44□□□□□ -0.26
SNED1-201ENST00000310397 HMBSP08397 361 aa13.44□□□□□ -0.26
SNED1-201ENST00000310397 ETS1P14921 441 aa13.44□□□□□ -0.26
SNED1-201ENST00000310397 MIPP30301 263 aa13.44□□□□□ -0.26
SNED1-201ENST00000310397 NRF1Q16656 503 aa13.44□□□□□ -0.26
SNED1-201ENST00000310397 ABRAXAS1Q6UWZ7 409 aa13.44□□□□□ -0.26
SNED1-201ENST00000310397 FAM126BQ8IXS8 530 aa13.44□□□□□ -0.26
SNED1-201ENST00000310397 LZTR1Q8N653 840 aa13.44□□□□□ -0.26
SNED1-201ENST00000310397 RNF145Q96MT1 663 aa13.44□□□□□ -0.26
SNED1-201ENST00000310397 SPAG4Q9NPE6 437 aa13.44□□□□□ -0.26
SNED1-201ENST00000310397 UBA2Q9UBT2 640 aaPredicted RBP13.44□□□□□ -0.26
SNED1-201ENST00000310397 ADAM28Q9UKQ2 775 aa13.44□□□□□ -0.26
SNED1-201ENST00000310397 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.43□□□□□ -0.26
SNED1-201ENST00000310397 RCCD1A6NED2 376 aa13.43□□□□□ -0.26
SNED1-201ENST00000310397 ATG7O95352 703 aa13.43□□□□□ -0.26
SNED1-201ENST00000310397 ZNF177Q13360 481 aaPredicted RBP13.43□□□□□ -0.26
SNED1-201ENST00000310397 AMHR2Q16671 573 aa13.43□□□□□ -0.26
SNED1-201ENST00000310397 FNDC5Q8NAU1 212 aa13.43□□□□□ -0.26
SNED1-201ENST00000310397 REXO4Q9GZR2 422 aaKnown RBP13.43□□□□□ -0.26
SNED1-201ENST00000310397 C6orf62Q9GZU0 229 aaPredicted RBP13.43□□□□□ -0.26
SNED1-201ENST00000310397 KRT6AP02538 564 aa13.43□□□□□ -0.26
SNED1-201ENST00000310397 KRT6BP04259 564 aa13.43□□□□□ -0.26
SNED1-201ENST00000310397 CYP1A1P04798 512 aaPredicted RBP13.43□□□□□ -0.26
SNED1-201ENST00000310397 KRT6CP48668 564 aa13.43□□□□□ -0.26
SNED1-201ENST00000310397 CPT1AP50416 773 aa13.43□□□□□ -0.26
SNED1-201ENST00000310397 TRAF3Q13114 568 aa13.43□□□□□ -0.26
SNED1-201ENST00000310397 SEZ6Q53EL9 994 aa13.43□□□□□ -0.26
SNED1-201ENST00000310397 ULK2Q8IYT8 1036 aa13.43□□□□□ -0.26
SNED1-201ENST00000310397 GORASP1Q9BQQ3 440 aa13.43□□□□□ -0.26
SNED1-201ENST00000310397 SCUBE2Q9NQ36 999 aa13.43□□□□□ -0.26
SNED1-201ENST00000310397 TAS2R13Q9NYV9 303 aa13.43□□□□□ -0.26
SNED1-201ENST00000310397 RSL24D1Q9UHA3 163 aaKnown RBP13.43□□□□□ -0.26
SNED1-201ENST00000310397 LIASO43766 372 aa13.43□□□□□ -0.26
SNED1-201ENST00000310397 RECQL5O94762 991 aaPredicted RBP13.43□□□□□ -0.26
SNED1-201ENST00000310397 PSMA3P25788 255 aa13.43□□□□□ -0.26
SNED1-201ENST00000310397 ITGA1P56199 1179 aa13.43□□□□□ -0.26
SNED1-201ENST00000310397 BTN2A2Q8WVV5 523 aa13.43□□□□□ -0.26
SNED1-201ENST00000310397 MON2Q7Z3U7 1717 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms