RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 NSUN2Q08J23 767 aaKnown RBP eCLIP14.42□□□□□ -0.1
SDC2-201ENST00000302190 CCNJLQ8IV13 435 aa14.42□□□□□ -0.1
SDC2-201ENST00000302190 PDZD8Q8NEN9 1154 aa14.42□□□□□ -0.1
SDC2-201ENST00000302190 RNF139Q8WU17 664 aa14.42□□□□□ -0.1
SDC2-201ENST00000302190 ELMO2Q96JJ3 720 aa14.42□□□□□ -0.1
SDC2-201ENST00000302190 TNIP3Q96KP6 325 aa14.42□□□□□ -0.1
SDC2-201ENST00000302190 ZNF184Q99676 751 aaPredicted RBP14.42□□□□□ -0.1
SDC2-201ENST00000302190 MRPL45Q9BRJ2 306 aaKnown RBP14.42□□□□□ -0.1
SDC2-201ENST00000302190 HAPLN2Q9GZV7 340 aa14.42□□□□□ -0.1
SDC2-201ENST00000302190 TXNRD2Q9NNW7 524 aa14.42□□□□□ -0.1
SDC2-201ENST00000302190 DICER1Q9UPY3 1922 aaKnown RBP14.42□□□□□ -0.1
SDC2-201ENST00000302190 ANKRD12Q6UB98 2062 aa14.42□□□□□ -0.1
SDC2-201ENST00000302190 RNF103-CHMP3A0A140T963 221 aa14.42□□□□□ -0.1
SDC2-201ENST00000302190 KLHL2O95198 593 aa14.42□□□□□ -0.1
SDC2-201ENST00000302190 ALADP13716 330 aa14.42□□□□□ -0.1
SDC2-201ENST00000302190 NELFEP18615 380 aaKnown RBP14.42□□□□□ -0.1
SDC2-201ENST00000302190 TSPAN8P19075 237 aa14.42□□□□□ -0.1
SDC2-201ENST00000302190 MRPS22P82650 360 aaKnown RBP14.42□□□□□ -0.1
SDC2-201ENST00000302190 KLF1Q13351 362 aaPredicted RBP14.42□□□□□ -0.1
SDC2-201ENST00000302190 PDK2Q15119 407 aa14.42□□□□□ -0.1
SDC2-201ENST00000302190 OLFML2BQ68BL8 750 aa14.42□□□□□ -0.1
SDC2-201ENST00000302190 RNF168Q8IYW5 571 aaPredicted RBP14.42□□□□□ -0.1
SDC2-201ENST00000302190 MOCOSQ96EN8 888 aa14.42□□□□□ -0.1
SDC2-201ENST00000302190 L3MBTL3Q96JM7 780 aaPredicted RBP14.42□□□□□ -0.1
SDC2-201ENST00000302190 CCDC68Q9H2F9 335 aa14.42□□□□□ -0.1
SDC2-201ENST00000302190 PRDM12Q9H4Q4 367 aa14.42□□□□□ -0.1
SDC2-201ENST00000302190 WDR55Q9H6Y2 383 aaPredicted RBP14.42□□□□□ -0.1
SDC2-201ENST00000302190 NRDE2Q9H7Z3 1164 aa14.42□□□□□ -0.1
SDC2-201ENST00000302190 RMI1Q9H9A7 625 aa14.42□□□□□ -0.1
SDC2-201ENST00000302190 SAR1AQ9NR31 198 aa14.42□□□□□ -0.1
SDC2-201ENST00000302190 GREB1LQ9C091 1923 aaPredicted RBP14.42□□□□□ -0.1
SDC2-201ENST00000302190 A0A096LPK6 155 aa14.42□□□□□ -0.1
SDC2-201ENST00000302190 UBA6A0AVT1 1052 aaPredicted RBP14.42□□□□□ -0.1
SDC2-201ENST00000302190 PRPF4O43172 522 aaKnown RBP eCLIP14.42□□□□□ -0.19e-6■□□□□ 10.5
SDC2-201ENST00000302190 PEX11AO75192 247 aa14.42□□□□□ -0.1
SDC2-201ENST00000302190 TBX10O75333 385 aa14.42□□□□□ -0.1
SDC2-201ENST00000302190 PMLP29590 882 aa14.42□□□□□ -0.1
SDC2-201ENST00000302190 PGGT1BP53609 377 aa14.42□□□□□ -0.1
SDC2-201ENST00000302190 NAGLUP54802 743 aa14.42□□□□□ -0.1
SDC2-201ENST00000302190 YWHAZP63104 245 aaKnown RBP14.42□□□□□ -0.1
SDC2-201ENST00000302190 PDK1Q15118 436 aa14.42□□□□□ -0.1
SDC2-201ENST00000302190 DDIASQ8IXT1 998 aa14.42□□□□□ -0.1
SDC2-201ENST00000302190 ANKRD13AQ8IZ07 590 aa14.42□□□□□ -0.1
SDC2-201ENST00000302190 NUP93Q8N1F7 819 aa14.42□□□□□ -0.1
SDC2-201ENST00000302190 PHF21BQ96EK2 531 aa14.42□□□□□ -0.1
SDC2-201ENST00000302190 APBA2Q99767 749 aa14.42□□□□□ -0.1
SDC2-201ENST00000302190 MMADHCQ9H3L0 296 aaPredicted RBP14.42□□□□□ -0.1
SDC2-201ENST00000302190 ZNF112Q9UJU3 913 aa14.42□□□□□ -0.1
SDC2-201ENST00000302190 BNIP3LO60238 219 aa14.41□□□□□ -0.1
SDC2-201ENST00000302190 GLRA3O75311 464 aa14.41□□□□□ -0.1
SDC2-201ENST00000302190 CSH1P0DML2 217 aa14.41□□□□□ -0.1
SDC2-201ENST00000302190 CSH2P0DML3 217 aa14.41□□□□□ -0.1
SDC2-201ENST00000302190 ACADSP16219 412 aa14.41□□□□□ -0.1
SDC2-201ENST00000302190 ETFBP38117 255 aa14.41□□□□□ -0.1
SDC2-201ENST00000302190 RALGPS1Q5JS13 557 aa14.41□□□□□ -0.1
SDC2-201ENST00000302190 ADGRD1Q6QNK2 874 aa14.41□□□□□ -0.1
SDC2-201ENST00000302190 C10orf107Q8IVU9 208 aa14.41□□□□□ -0.1
SDC2-201ENST00000302190 PIWIL2Q8TC59 973 aaKnown RBP14.41□□□□□ -0.1
SDC2-201ENST00000302190 PCDH18Q9HCL0 1135 aa14.41□□□□□ -0.1
SDC2-201ENST00000302190 TMPRSS4Q9NRS4 437 aa14.41□□□□□ -0.1
SDC2-201ENST00000302190 CACNG4Q9UBN1 327 aa14.41□□□□□ -0.1
SDC2-201ENST00000302190 RUVBL2Q9Y230 463 aaKnown RBP14.41□□□□□ -0.1
SDC2-201ENST00000302190 MAGEA13PA6NCF6 341 aa14.41□□□□□ -0.1
SDC2-201ENST00000302190 C3orf70A6NLC5 250 aaPredicted RBP14.41□□□□□ -0.1
SDC2-201ENST00000302190 RAG1P15918 1043 aa14.41□□□□□ -0.1
SDC2-201ENST00000302190 EPHA3P29320 983 aa14.41□□□□□ -0.1
SDC2-201ENST00000302190 SLC6A3Q01959 620 aa14.41□□□□□ -0.1
SDC2-201ENST00000302190 ULK2Q8IYT8 1036 aa14.41□□□□□ -0.1
SDC2-201ENST00000302190 SLC4A11Q8NBS3 891 aa14.41□□□□□ -0.1
SDC2-201ENST00000302190 SLC35B2Q8TB61 432 aa14.41□□□□□ -0.1
SDC2-201ENST00000302190 DIS3LQ8TF46 1054 aaKnown RBP14.41□□□□□ -0.1
SDC2-201ENST00000302190 SLC44A1Q8WWI5 657 aa14.41□□□□□ -0.1
SDC2-201ENST00000302190 PHACTR1Q9C0D0 580 aa14.41□□□□□ -0.1
SDC2-201ENST00000302190 THAP1Q9NVV9 213 aa14.41□□□□□ -0.1
SDC2-201ENST00000302190 METTL18O95568 372 aa14.41□□□□□ -0.1
SDC2-201ENST00000302190 ARL2P36404 184 aa14.41□□□□□ -0.1
SDC2-201ENST00000302190 HTRA3P83110 453 aa14.41□□□□□ -0.1
SDC2-201ENST00000302190 CDHR3Q6ZTQ4 885 aa14.41□□□□□ -0.1
SDC2-201ENST00000302190 SNX32Q86XE0 403 aa14.41□□□□□ -0.1
SDC2-201ENST00000302190 DDX18Q9NVP1 670 aaKnown RBP14.41□□□□□ -0.1
SDC2-201ENST00000302190 SYNPO2Q9UMS6 1093 aa14.41□□□□□ -0.1
SDC2-201ENST00000302190 NENFQ9UMX5 172 aa14.41□□□□□ -0.1
SDC2-201ENST00000302190 ARHGAP26Q9UNA1 814 aa14.41□□□□□ -0.1
SDC2-201ENST00000302190 SSX2IPQ9Y2D8 614 aa14.41□□□□□ -0.1
SDC2-201ENST00000302190 SOCS7O14512 581 aa14.4□□□□□ -0.1
SDC2-201ENST00000302190 ATP6V1C1P21283 382 aa14.4□□□□□ -0.1
SDC2-201ENST00000302190 ABL2P42684 1182 aa14.4□□□□□ -0.1
SDC2-201ENST00000302190 OASLQ15646 514 aaKnown RBP14.4□□□□□ -0.1
SDC2-201ENST00000302190 DLG2Q15700 870 aa14.4□□□□□ -0.1
SDC2-201ENST00000302190 SPDYAQ5MJ70 313 aa14.4□□□□□ -0.1
SDC2-201ENST00000302190 DNERQ8NFT8 737 aa14.4□□□□□ -0.1
SDC2-201ENST00000302190 ATP6V1E2Q96A05 226 aa14.4□□□□□ -0.1
SDC2-201ENST00000302190 PIF1Q9H611 641 aa14.4□□□□□ -0.1
SDC2-201ENST00000302190 XPNPEP3Q9NQH7 507 aa14.4□□□□□ -0.1
SDC2-201ENST00000302190 CNTNAP2Q9UHC6 1331 aa14.4□□□□□ -0.1
SDC2-201ENST00000302190 GMNNO75496 209 aa14.4□□□□□ -0.1
SDC2-201ENST00000302190 FGFR3P22607 806 aa14.4□□□□□ -0.1
SDC2-201ENST00000302190 MAGEA8P43361 318 aa14.4□□□□□ -0.1
SDC2-201ENST00000302190 MPP3Q13368 585 aa14.4□□□□□ -0.1
SDC2-201ENST00000302190 RARS2Q5T160 578 aaKnown RBP14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms