RNA–Protein interactions for RNA: ENST00000301732.9

ABCA3-201, Transcript of ATP binding cassette subfamily A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA3, Length 6,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-201ENST00000301732 TDRD10Q5VZ19 366 aaKnown RBP12.62□□□□□ -0.39
ABCA3-201ENST00000301732 SLC26A11Q86WA9 606 aa12.62□□□□□ -0.39
ABCA3-201ENST00000301732 FAM126BQ8IXS8 530 aa12.62□□□□□ -0.39
ABCA3-201ENST00000301732 TRAPPC12Q8WVT3 735 aa12.62□□□□□ -0.39
ABCA3-201ENST00000301732 ELL3Q9HB65 397 aaPredicted RBP12.62□□□□□ -0.39
ABCA3-201ENST00000301732 RBM22Q9NW64 420 aaKnown RBP eCLIP12.62□□□□□ -0.39
ABCA3-201ENST00000301732 CIDEBQ9UHD4 219 aa12.62□□□□□ -0.39
ABCA3-201ENST00000301732 ADGRA3Q8IWK6 1321 aa12.62□□□□□ -0.39
ABCA3-201ENST00000301732 TMEM2Q9UHN6 1383 aa12.62□□□□□ -0.39
ABCA3-201ENST00000301732 EARS2Q5JPH6 523 aaKnown RBP12.62□□□□□ -0.39
ABCA3-201ENST00000301732 SPANXN2Q5MJ10 180 aa12.62□□□□□ -0.39
ABCA3-201ENST00000301732 IL27RAQ6UWB1 636 aa12.62□□□□□ -0.39
ABCA3-201ENST00000301732 TEKT5Q96M29 485 aa12.62□□□□□ -0.39
ABCA3-201ENST00000301732 NUAK2Q9H093 628 aa12.62□□□□□ -0.39
ABCA3-201ENST00000301732 STON1Q9Y6Q2 735 aa12.62□□□□□ -0.39
ABCA3-201ENST00000301732 SH3D21A4FU49 640 aa12.62□□□□□ -0.39
ABCA3-201ENST00000301732 BTN3A1O00481 513 aa12.62□□□□□ -0.39
ABCA3-201ENST00000301732 TPP1O14773 563 aa12.62□□□□□ -0.39
ABCA3-201ENST00000301732 PEX11AO75192 247 aa12.62□□□□□ -0.39
ABCA3-201ENST00000301732 MED26O95402 600 aa12.62□□□□□ -0.39
ABCA3-201ENST00000301732 CKMP06732 381 aa12.62□□□□□ -0.39
ABCA3-201ENST00000301732 PIRTP0C851 137 aa12.62□□□□□ -0.39
ABCA3-201ENST00000301732 RARAP10276 462 aa12.62□□□□□ -0.39
ABCA3-201ENST00000301732 LRPAP1P30533 357 aa12.62□□□□□ -0.39
ABCA3-201ENST00000301732 ULK2Q8IYT8 1036 aa12.62□□□□□ -0.39
ABCA3-201ENST00000301732 ENGASEQ8NFI3 743 aa12.62□□□□□ -0.39
ABCA3-201ENST00000301732 WDR60Q8WVS4 1066 aa12.62□□□□□ -0.39
ABCA3-201ENST00000301732 KRT35Q92764 455 aa12.62□□□□□ -0.39
ABCA3-201ENST00000301732 SLC9A7Q96T83 725 aa12.62□□□□□ -0.39
ABCA3-201ENST00000301732 PDCD10Q9BUL8 212 aa12.62□□□□□ -0.39
ABCA3-201ENST00000301732 ETAA1Q9NY74 926 aa12.62□□□□□ -0.39
ABCA3-201ENST00000301732 CNOT7Q9UIV1 285 aaKnown RBP12.62□□□□□ -0.39
ABCA3-201ENST00000301732 F5H5T6 163 aa12.61□□□□□ -0.39
ABCA3-201ENST00000301732 TRAPPC3O43617 180 aa12.61□□□□□ -0.39
ABCA3-201ENST00000301732 SYNCRIPO60506 623 aaKnown RBP12.61□□□□□ -0.39
ABCA3-201ENST00000301732 MT-ND1P03886 318 aa12.61□□□□□ -0.39
ABCA3-201ENST00000301732 CRATP43155 626 aa12.61□□□□□ -0.39
ABCA3-201ENST00000301732 GALK1P51570 392 aa12.61□□□□□ -0.39
ABCA3-201ENST00000301732 HPS6Q86YV9 775 aa12.61□□□□□ -0.39
ABCA3-201ENST00000301732 ITFG1Q8TB96 612 aa12.61□□□□□ -0.39
ABCA3-201ENST00000301732 TBC1D16Q8TBP0 767 aa12.61□□□□□ -0.39
ABCA3-201ENST00000301732 NFKBIZQ9BYH8 718 aa12.61□□□□□ -0.39
ABCA3-201ENST00000301732 TAS2R14Q9NYV8 317 aa12.61□□□□□ -0.39
ABCA3-201ENST00000301732 KDM6BO15054 1643 aa12.61□□□□□ -0.39
ABCA3-201ENST00000301732 TK2O00142 265 aa12.61□□□□□ -0.39
ABCA3-201ENST00000301732 ANXA9O76027 345 aa12.61□□□□□ -0.39
ABCA3-201ENST00000301732 SEPHS1P49903 392 aa12.61□□□□□ -0.39
ABCA3-201ENST00000301732 PEX6Q13608 980 aa12.61□□□□□ -0.39
ABCA3-201ENST00000301732 SPIDRQ14159 915 aa12.61□□□□□ -0.39
ABCA3-201ENST00000301732 RFX4Q33E94 735 aa12.61□□□□□ -0.39
ABCA3-201ENST00000301732 OLFML2AQ68BL7 652 aa12.61□□□□□ -0.39
ABCA3-201ENST00000301732 KCNMB4Q86W47 210 aa12.61□□□□□ -0.39
ABCA3-201ENST00000301732 PCDH12Q9NPG4 1184 aa12.61□□□□□ -0.39
ABCA3-201ENST00000301732 CCR1P32246 355 aa12.61□□□□□ -0.39
ABCA3-201ENST00000301732 GUCA1AP43080 201 aaPredicted RBP12.61□□□□□ -0.39
ABCA3-201ENST00000301732 PTDSS1P48651 473 aaKnown RBP12.61□□□□□ -0.39
ABCA3-201ENST00000301732 RAPSNQ13702 412 aa12.61□□□□□ -0.39
ABCA3-201ENST00000301732 FBXO48Q5FWF7 155 aa12.61□□□□□ -0.39
ABCA3-201ENST00000301732 LPCAT4Q643R3 524 aa12.61□□□□□ -0.39
ABCA3-201ENST00000301732 KIAA0408Q6ZU52 694 aa12.61□□□□□ -0.39
ABCA3-201ENST00000301732 RUBCNQ92622 972 aa12.61□□□□□ -0.39
ABCA3-201ENST00000301732 FRMD6Q96NE9 622 aa12.61□□□□□ -0.39
ABCA3-201ENST00000301732 C12orf65Q9H3J6 166 aaKnown RBP12.61□□□□□ -0.39
ABCA3-201ENST00000301732 LRRC40Q9H9A6 602 aa12.61□□□□□ -0.39
ABCA3-201ENST00000301732 PCDHB8Q9UN66 801 aa12.61□□□□□ -0.39
ABCA3-201ENST00000301732 WDR62O43379 1518 aa12.61□□□□□ -0.39
ABCA3-201ENST00000301732 USP6P35125 1406 aa12.61□□□□□ -0.39
ABCA3-201ENST00000301732 A0A096LPK6 155 aa12.61□□□□□ -0.39
ABCA3-201ENST00000301732 RPS6KA4O75676 772 aa12.61□□□□□ -0.39
ABCA3-201ENST00000301732 CCDC153Q494R4 210 aa12.61□□□□□ -0.39
ABCA3-201ENST00000301732 GALNT5Q7Z7M9 940 aa12.61□□□□□ -0.39
ABCA3-201ENST00000301732 ZC3H7AQ8IWR0 971 aaKnown RBP12.61□□□□□ -0.39
ABCA3-201ENST00000301732 A1CFQ9NQ94 594 aaKnown RBP12.61□□□□□ -0.39
ABCA3-201ENST00000301732 CISHQ9NSE2 258 aa12.61□□□□□ -0.39
ABCA3-201ENST00000301732 NKIRAS2Q9NYR9 191 aa12.61□□□□□ -0.39
ABCA3-201ENST00000301732 FAM220BPB1ANY3 271 aa12.61□□□□□ -0.39
ABCA3-201ENST00000301732 SPAG6O75602 509 aa12.61□□□□□ -0.39
ABCA3-201ENST00000301732 SKIV2L2P42285 1042 aaKnown RBP12.61□□□□□ -0.39
ABCA3-201ENST00000301732 KCNJ6P48051 423 aa12.61□□□□□ -0.39
ABCA3-201ENST00000301732 GEMP55040 296 aa12.61□□□□□ -0.39
ABCA3-201ENST00000301732 DEFB128Q7Z7B8 93 aa12.61□□□□□ -0.39
ABCA3-201ENST00000301732 OOSP2Q86WS3 158 aa12.61□□□□□ -0.39
ABCA3-201ENST00000301732 ADGRF2Q8IZF7 708 aa12.61□□□□□ -0.39
ABCA3-201ENST00000301732 TNS4Q8IZW8 715 aa12.61□□□□□ -0.39
ABCA3-201ENST00000301732 OSBPL6Q9BZF3 934 aa12.61□□□□□ -0.39
ABCA3-201ENST00000301732 TPK1Q9H3S4 243 aa12.61□□□□□ -0.39
ABCA3-201ENST00000301732 INVSQ9Y283 1065 aa12.61□□□□□ -0.39
ABCA3-201ENST00000301732 PCDHGA4Q9Y5G9 962 aa12.61□□□□□ -0.39
ABCA3-201ENST00000301732 FAM205AQ6ZU69 1335 aa12.6□□□□□ -0.39
ABCA3-201ENST00000301732 PSMG1O95456 288 aa12.6□□□□□ -0.39
ABCA3-201ENST00000301732 LDLRP01130 860 aa12.6□□□□□ -0.39
ABCA3-201ENST00000301732 VAV1P15498 845 aa12.6□□□□□ -0.39
ABCA3-201ENST00000301732 NFKB1P19838 968 aa12.6□□□□□ -0.39
ABCA3-201ENST00000301732 RHOAP61586 193 aa12.6□□□□□ -0.39
ABCA3-201ENST00000301732 TAF1CQ15572 869 aaPredicted RBP12.6□□□□□ -0.39
ABCA3-201ENST00000301732 ATP13A4Q4VNC1 1196 aa12.6□□□□□ -0.39
ABCA3-201ENST00000301732 C16orf62Q7Z3J2 963 aa12.6□□□□□ -0.39
ABCA3-201ENST00000301732 TMC3Q7Z5M5 1100 aa12.6□□□□□ -0.39
ABCA3-201ENST00000301732 GLIS3Q8NEA6 775 aa12.6□□□□□ -0.39
ABCA3-201ENST00000301732 HNRNPLLQ8WVV9 542 aaKnown RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms