RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 UTS2BQ765I0 119 aa13.63□□□□□ -0.23
CASC4-201ENST00000299957 PIGZQ86VD9 579 aa13.63□□□□□ -0.23
CASC4-201ENST00000299957 ADGRF2Q8IZF7 708 aa13.63□□□□□ -0.23
CASC4-201ENST00000299957 NKD2Q969F2 451 aaPredicted RBP13.63□□□□□ -0.23
CASC4-201ENST00000299957 THAP11Q96EK4 314 aa13.63□□□□□ -0.23
CASC4-201ENST00000299957 MFSD3Q96ES6 412 aa13.63□□□□□ -0.23
CASC4-201ENST00000299957 ZNF560Q96MR9 790 aa13.63□□□□□ -0.23
CASC4-201ENST00000299957 EBNA1BP2Q99848 306 aaKnown RBP13.63□□□□□ -0.23
CASC4-201ENST00000299957 SLC5A4Q9NY91 659 aa13.63□□□□□ -0.23
CASC4-201ENST00000299957 ABI2Q9NYB9 513 aaPredicted RBP13.63□□□□□ -0.23
CASC4-201ENST00000299957 PDP2Q9P2J9 529 aa13.63□□□□□ -0.23
CASC4-201ENST00000299957 CRYL1Q9Y2S2 319 aa13.63□□□□□ -0.23
CASC4-201ENST00000299957 SNCAIPQ9Y6H5 919 aa13.63□□□□□ -0.23
CASC4-201ENST00000299957 ANGPT2O15123 496 aa13.63□□□□□ -0.23
CASC4-201ENST00000299957 TRIM13O60858 407 aa13.63□□□□□ -0.23
CASC4-201ENST00000299957 IVDP26440 423 aa13.63□□□□□ -0.23
CASC4-201ENST00000299957 MMP14P50281 582 aa13.63□□□□□ -0.23
CASC4-201ENST00000299957 LRRC38Q5VT99 294 aa13.63□□□□□ -0.23
CASC4-201ENST00000299957 SCIMPQ6UWF3 145 aa13.63□□□□□ -0.23
CASC4-201ENST00000299957 ANGPTL8Q6UXH0 198 aa13.63□□□□□ -0.23
CASC4-201ENST00000299957 KCNMB4Q86W47 210 aa13.63□□□□□ -0.23
CASC4-201ENST00000299957 ZC3H3Q8IXZ2 948 aaKnown RBP13.63□□□□□ -0.23
CASC4-201ENST00000299957 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.63□□□□□ -0.23
CASC4-201ENST00000299957 KCNK4Q9NYG8 393 aa13.63□□□□□ -0.23
CASC4-201ENST00000299957 LYPLA2O95372 231 aa13.63□□□□□ -0.23
CASC4-201ENST00000299957 ITGA2BP08514 1039 aa13.63□□□□□ -0.23
CASC4-201ENST00000299957 KLRC2P26717 231 aa13.63□□□□□ -0.23
CASC4-201ENST00000299957 TAF6P49848 677 aa13.63□□□□□ -0.23
CASC4-201ENST00000299957 HADHBP55084 474 aaKnown RBP13.63□□□□□ -0.23
CASC4-201ENST00000299957 BLMHQ13867 455 aa13.63□□□□□ -0.23
CASC4-201ENST00000299957 OTUD3Q5T2D3 398 aaPredicted RBP13.63□□□□□ -0.23
CASC4-201ENST00000299957 ZNF470Q6ECI4 717 aa13.63□□□□□ -0.23
CASC4-201ENST00000299957 TAS2R42Q7RTR8 314 aa13.63□□□□□ -0.23
CASC4-201ENST00000299957 KCTD4Q8WVF5 259 aa13.63□□□□□ -0.23
CASC4-201ENST00000299957 LGALS13Q9UHV8 139 aa13.63□□□□□ -0.23
CASC4-201ENST00000299957 PLLPQ9Y342 182 aa13.63□□□□□ -0.23
CASC4-201ENST00000299957 MFHAS1Q9Y4C4 1052 aa13.63□□□□□ -0.23
CASC4-201ENST00000299957 AGRPO00253 132 aa13.62□□□□□ -0.23
CASC4-201ENST00000299957 MTA2O94776 668 aa13.62□□□□□ -0.23
CASC4-201ENST00000299957 POMCP01189 267 aa13.62□□□□□ -0.23
CASC4-201ENST00000299957 SP100P23497 879 aaPredicted RBP13.62□□□□□ -0.23
CASC4-201ENST00000299957 ZNF460Q14592 562 aa13.62□□□□□ -0.23
CASC4-201ENST00000299957 KCTD21Q4G0X4 260 aa13.62□□□□□ -0.23
CASC4-201ENST00000299957 WLSQ5T9L3 541 aa13.62□□□□□ -0.23
CASC4-201ENST00000299957 C16orf87Q6PH81 154 aa13.62□□□□□ -0.23
CASC4-201ENST00000299957 ADGRD1Q6QNK2 874 aa13.62□□□□□ -0.23
CASC4-201ENST00000299957 OR6Y1Q8NGX8 325 aa13.62□□□□□ -0.23
CASC4-201ENST00000299957 TUBGCP3Q96CW5 907 aa13.62□□□□□ -0.23
CASC4-201ENST00000299957 RCN3Q96D15 328 aa13.62□□□□□ -0.23
CASC4-201ENST00000299957 SEPHS2Q99611 448 aa13.62□□□□□ -0.23
CASC4-201ENST00000299957 SYT15Q9BQS2 421 aa13.62□□□□□ -0.23
CASC4-201ENST00000299957 ULBP1Q9BZM6 244 aa13.62□□□□□ -0.23
CASC4-201ENST00000299957 DPEP3Q9H4B8 488 aa13.62□□□□□ -0.23
CASC4-201ENST00000299957 NMRAL1Q9HBL8 299 aa13.62□□□□□ -0.23
CASC4-201ENST00000299957 TRPC7Q9HCX4 862 aa13.62□□□□□ -0.23
CASC4-201ENST00000299957 ACOT9Q9Y305 439 aa13.62□□□□□ -0.23
CASC4-201ENST00000299957 NR5A2O00482 541 aa13.62□□□□□ -0.23
CASC4-201ENST00000299957 PRPF4O43172 522 aaKnown RBP eCLIP13.62□□□□□ -0.23
CASC4-201ENST00000299957 FARP2O94887 1054 aaPredicted RBP13.62□□□□□ -0.23
CASC4-201ENST00000299957 PEX2P28328 305 aa13.62□□□□□ -0.23
CASC4-201ENST00000299957 PPM1FP49593 454 aaPredicted RBP13.62□□□□□ -0.23
CASC4-201ENST00000299957 CDH13P55290 713 aa13.62□□□□□ -0.23
CASC4-201ENST00000299957 GSCP56915 257 aaPredicted RBP13.62□□□□□ -0.23
CASC4-201ENST00000299957 PARP6Q2NL67 630 aa13.62□□□□□ -0.23
CASC4-201ENST00000299957 TAS1R3Q7RTX0 852 aa13.62□□□□□ -0.23
CASC4-201ENST00000299957 TMC7Q7Z402 723 aa13.62□□□□□ -0.23
CASC4-201ENST00000299957 ABI1Q8IZP0 508 aa13.62□□□□□ -0.23
CASC4-201ENST00000299957 BANPQ8N9N5 519 aa13.62□□□□□ -0.23
CASC4-201ENST00000299957 KYQ8NBH2 561 aa13.62□□□□□ -0.23
CASC4-201ENST00000299957 BHLHE22Q8NFJ8 381 aaPredicted RBP13.62□□□□□ -0.23
CASC4-201ENST00000299957 TUBGCP4Q9UGJ1 667 aa13.62□□□□□ -0.23
CASC4-201ENST00000299957 CORO1CQ9ULV4 474 aaPredicted RBP13.62□□□□□ -0.23
CASC4-201ENST00000299957 TTC36A6NLP5 189 aa13.62□□□□□ -0.23
CASC4-201ENST00000299957 MAGEB2O15479 319 aa13.62□□□□□ -0.23
CASC4-201ENST00000299957 ITM2AO43736 263 aa13.62□□□□□ -0.23
CASC4-201ENST00000299957 MPSTP25325 297 aa13.62□□□□□ -0.23
CASC4-201ENST00000299957 KPNA2P52292 529 aaKnown RBP13.62□□□□□ -0.23
CASC4-201ENST00000299957 BCAT1P54687 386 aa13.62□□□□□ -0.23
CASC4-201ENST00000299957 TMEM198Q66K66 360 aa13.62□□□□□ -0.23
CASC4-201ENST00000299957 ANO7Q6IWH7 933 aa13.62□□□□□ -0.23
CASC4-201ENST00000299957 SLC4A11Q8NBS3 891 aa13.62□□□□□ -0.23
CASC4-201ENST00000299957 PPHLN1Q8NEY8 458 aaKnown RBP13.62□□□□□ -0.23
CASC4-201ENST00000299957 PCDH19Q8TAB3 1148 aa13.62□□□□□ -0.23
CASC4-201ENST00000299957 P2RY11Q96G91 374 aa13.62□□□□□ -0.23
CASC4-201ENST00000299957 PHF12Q96QT6 1004 aa13.62□□□□□ -0.23
CASC4-201ENST00000299957 DSEQ9UL01 958 aa13.62□□□□□ -0.23
CASC4-201ENST00000299957 NUP98P52948 1817 aa13.61□□□□□ -0.23
CASC4-201ENST00000299957 THRAP10827 490 aa13.61□□□□□ -0.23
CASC4-201ENST00000299957 EEF1DP29692 281 aaKnown RBP13.61□□□□□ -0.23
CASC4-201ENST00000299957 SLC41A1Q8IVJ1 513 aa13.61□□□□□ -0.23
CASC4-201ENST00000299957 DNAJC1Q96KC8 554 aaKnown RBP13.61□□□□□ -0.23
CASC4-201ENST00000299957 AGAP2Q99490 1192 aa13.61□□□□□ -0.23
CASC4-201ENST00000299957 NXF3Q9H4D5 531 aaKnown RBP13.61□□□□□ -0.23
CASC4-201ENST00000299957 DHX33Q9H6R0 707 aaKnown RBP13.61□□□□□ -0.23
CASC4-201ENST00000299957 SPC25Q9HBM1 224 aa13.61□□□□□ -0.23
CASC4-201ENST00000299957 RBM22Q9NW64 420 aaKnown RBP eCLIP13.61□□□□□ -0.23
CASC4-201ENST00000299957 TMEM216Q9P0N5 145 aa13.61□□□□□ -0.23
CASC4-201ENST00000299957 PPM1HQ9ULR3 514 aa13.61□□□□□ -0.23
CASC4-201ENST00000299957 DCAF8L1A6NGE4 600 aa13.61□□□□□ -0.23
CASC4-201ENST00000299957 ASB14A6NK59 587 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms