RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 DLG4P78352 724 aa13.86□□□□□ -0.19
CHRFAM7A-201ENST00000299847 MGAT5Q09328 741 aa13.86□□□□□ -0.19
CHRFAM7A-201ENST00000299847 CCNG2Q16589 344 aa13.86□□□□□ -0.19
CHRFAM7A-201ENST00000299847 PRR23CQ6ZRP0 262 aa13.86□□□□□ -0.19
CHRFAM7A-201ENST00000299847 SH3BP5LQ7L8J4 393 aa13.86□□□□□ -0.19
CHRFAM7A-201ENST00000299847 KRT77Q7Z794 578 aa13.86□□□□□ -0.19
CHRFAM7A-201ENST00000299847 RNF145Q96MT1 663 aa13.86□□□□□ -0.19
CHRFAM7A-201ENST00000299847 A0A087X0B3 334 aa13.86□□□□□ -0.19
CHRFAM7A-201ENST00000299847 A0A0A6YYK5 440 aaPredicted RBP13.86□□□□□ -0.19
CHRFAM7A-201ENST00000299847 H3BRB1 525 aa13.86□□□□□ -0.19
CHRFAM7A-201ENST00000299847 TBC1D12O60347 775 aa13.86□□□□□ -0.19
CHRFAM7A-201ENST00000299847 F9P00740 461 aa13.86□□□□□ -0.19
CHRFAM7A-201ENST00000299847 PAPD7Q5XG87 772 aaKnown RBP13.86□□□□□ -0.19
CHRFAM7A-201ENST00000299847 MARK2Q7KZI7 788 aaKnown RBP13.86□□□□□ -0.19
CHRFAM7A-201ENST00000299847 FBXO39Q8N4B4 442 aa13.86□□□□□ -0.19
CHRFAM7A-201ENST00000299847 TUT1Q9H6E5 874 aaKnown RBP13.86□□□□□ -0.19
CHRFAM7A-201ENST00000299847 BPIFA1Q9NP55 256 aa13.86□□□□□ -0.19
CHRFAM7A-201ENST00000299847 ACP6Q9NPH0 428 aa13.86□□□□□ -0.19
CHRFAM7A-201ENST00000299847 SEMA4BQ9NPR2 832 aaPredicted RBP13.86□□□□□ -0.19
CHRFAM7A-201ENST00000299847 NINJ2Q9NZG7 142 aa13.86□□□□□ -0.19
CHRFAM7A-201ENST00000299847 DAPK2Q9UIK4 370 aa13.86□□□□□ -0.19
CHRFAM7A-201ENST00000299847 PACSIN3Q9UKS6 424 aa13.86□□□□□ -0.19
CHRFAM7A-201ENST00000299847 ANKRD63C9JTQ0 380 aa13.86□□□□□ -0.19
CHRFAM7A-201ENST00000299847 PSMD12O00232 456 aaPredicted RBP13.86□□□□□ -0.19
CHRFAM7A-201ENST00000299847 FNDC3BQ53EP0 1204 aaKnown RBP13.86□□□□□ -0.19
CHRFAM7A-201ENST00000299847 ARMCX4Q5H9R4 360 aa13.86□□□□□ -0.19
CHRFAM7A-201ENST00000299847 SNX30Q5VWJ9 437 aa13.86□□□□□ -0.19
CHRFAM7A-201ENST00000299847 SPATA20Q8TB22 786 aa13.86□□□□□ -0.19
CHRFAM7A-201ENST00000299847 PURBQ96QR8 312 aaKnown RBP13.86□□□□□ -0.19
CHRFAM7A-201ENST00000299847 SPATA2Q9UM82 520 aa13.86□□□□□ -0.19
CHRFAM7A-201ENST00000299847 AP4S1Q9Y587 144 aa13.86□□□□□ -0.19
CHRFAM7A-201ENST00000299847 C1orf232A0A0U1RR37 186 aa13.86□□□□□ -0.19
CHRFAM7A-201ENST00000299847 H3BN98 237 aa13.86□□□□□ -0.19
CHRFAM7A-201ENST00000299847 PHGDHO43175 533 aaKnown RBP13.86□□□□□ -0.19
CHRFAM7A-201ENST00000299847 PIAS1O75925 651 aa13.86□□□□□ -0.19
CHRFAM7A-201ENST00000299847 GTF2E2P29084 291 aaKnown RBP13.86□□□□□ -0.19
CHRFAM7A-201ENST00000299847 GRK4P32298 578 aa13.86□□□□□ -0.19
CHRFAM7A-201ENST00000299847 ANXA11P50995 505 aaKnown RBP13.86□□□□□ -0.19
CHRFAM7A-201ENST00000299847 ZSWIM7Q19AV6 140 aa13.86□□□□□ -0.19
CHRFAM7A-201ENST00000299847 SLC44A4Q53GD3 710 aa13.86□□□□□ -0.19
CHRFAM7A-201ENST00000299847 DEFB106AQ8N104 65 aa13.86□□□□□ -0.19
CHRFAM7A-201ENST00000299847 ZDHHC15Q96MV8 337 aa13.86□□□□□ -0.19
CHRFAM7A-201ENST00000299847 TRIM8Q9BZR9 551 aa13.86□□□□□ -0.19
CHRFAM7A-201ENST00000299847 MROH8Q9H579 483 aa13.86□□□□□ -0.19
CHRFAM7A-201ENST00000299847 BARX2Q9UMQ3 279 aaPredicted RBP13.86□□□□□ -0.19
CHRFAM7A-201ENST00000299847 CES2O00748 559 aa13.86□□□□□ -0.19
CHRFAM7A-201ENST00000299847 RAMP2O60895 175 aa13.86□□□□□ -0.19
CHRFAM7A-201ENST00000299847 CNOT3O75175 753 aaKnown RBP13.86□□□□□ -0.19
CHRFAM7A-201ENST00000299847 ZMPSTE24O75844 475 aa13.86□□□□□ -0.19
CHRFAM7A-201ENST00000299847 FBXO21O94952 628 aa13.86□□□□□ -0.19
CHRFAM7A-201ENST00000299847 ENO2P09104 434 aaPredicted RBP13.86□□□□□ -0.19
CHRFAM7A-201ENST00000299847 RARAP10276 462 aa13.86□□□□□ -0.19
CHRFAM7A-201ENST00000299847 UMPSP11172 480 aa13.86□□□□□ -0.19
CHRFAM7A-201ENST00000299847 PECAM1P16284 738 aaPredicted RBP13.86□□□□□ -0.19
CHRFAM7A-201ENST00000299847 KRT20P35900 424 aa13.86□□□□□ -0.19
CHRFAM7A-201ENST00000299847 KPNB1Q14974 876 aaKnown RBP13.86□□□□□ -0.19
CHRFAM7A-201ENST00000299847 DDR2Q16832 855 aa13.86□□□□□ -0.19
CHRFAM7A-201ENST00000299847 MACC1Q6ZN28 852 aa13.86□□□□□ -0.19
CHRFAM7A-201ENST00000299847 C3orf20Q8ND61 904 aa13.86□□□□□ -0.19
CHRFAM7A-201ENST00000299847 FRMD8Q9BZ67 464 aaPredicted RBP13.86□□□□□ -0.19
CHRFAM7A-201ENST00000299847 CDHR5Q9HBB8 845 aa13.86□□□□□ -0.19
CHRFAM7A-201ENST00000299847 IL17RBQ9NRM6 502 aa13.86□□□□□ -0.19
CHRFAM7A-201ENST00000299847 ITGA11Q9UKX5 1188 aa13.86□□□□□ -0.19
CHRFAM7A-201ENST00000299847 DYRK3O43781 588 aa13.85□□□□□ -0.19
CHRFAM7A-201ENST00000299847 DDNO94850 711 aaPredicted RBP13.85□□□□□ -0.19
CHRFAM7A-201ENST00000299847 SLC15A2Q16348 729 aa13.85□□□□□ -0.19
CHRFAM7A-201ENST00000299847 GRTP1Q5TC63 336 aa13.85□□□□□ -0.19
CHRFAM7A-201ENST00000299847 ZNF57Q68EA5 555 aaPredicted RBP13.85□□□□□ -0.19
CHRFAM7A-201ENST00000299847 LPCAT2Q7L5N7 544 aa13.85□□□□□ -0.19
CHRFAM7A-201ENST00000299847 PARP8Q8N3A8 854 aa13.85□□□□□ -0.19
CHRFAM7A-201ENST00000299847 GRIN3AQ8TCU5 1115 aa13.85□□□□□ -0.19
CHRFAM7A-201ENST00000299847 HNRNPLLQ8WVV9 542 aaKnown RBP13.85□□□□□ -0.19
CHRFAM7A-201ENST00000299847 HTR3CQ8WXA8 447 aa13.85□□□□□ -0.19
CHRFAM7A-201ENST00000299847 TKTL2Q9H0I9 626 aa13.85□□□□□ -0.19
CHRFAM7A-201ENST00000299847 FAM50BQ9Y247 325 aa13.85□□□□□ -0.19
CHRFAM7A-201ENST00000299847 CHKBQ9Y259 395 aa13.85□□□□□ -0.19
CHRFAM7A-201ENST00000299847 TM9SF1O15321 606 aa13.85□□□□□ -0.19
CHRFAM7A-201ENST00000299847 YBX3P16989 372 aaKnown RBP eCLIP13.85□□□□□ -0.19
CHRFAM7A-201ENST00000299847 TSPAN8P19075 237 aa13.85□□□□□ -0.19
CHRFAM7A-201ENST00000299847 PTPN4P29074 926 aa13.85□□□□□ -0.19
CHRFAM7A-201ENST00000299847 NPY2RP49146 381 aa13.85□□□□□ -0.19
CHRFAM7A-201ENST00000299847 PPP4CP60510 307 aa13.85□□□□□ -0.19
CHRFAM7A-201ENST00000299847 MFSD10Q14728 455 aa13.85□□□□□ -0.19
CHRFAM7A-201ENST00000299847 MFSD7Q6UXD7 560 aa13.85□□□□□ -0.19
CHRFAM7A-201ENST00000299847 GMCL1P1Q8NEA9 526 aa13.85□□□□□ -0.19
CHRFAM7A-201ENST00000299847 ZNF606Q8WXB4 792 aa13.85□□□□□ -0.19
CHRFAM7A-201ENST00000299847 OXNAD1Q96HP4 312 aaPredicted RBP13.85□□□□□ -0.19
CHRFAM7A-201ENST00000299847 RXFP1Q9HBX9 757 aa13.85□□□□□ -0.19
CHRFAM7A-201ENST00000299847 PRKAG3Q9UGI9 489 aa13.85□□□□□ -0.19
CHRFAM7A-201ENST00000299847 DSEQ9UL01 958 aa13.85□□□□□ -0.19
CHRFAM7A-201ENST00000299847 FAM47E-STBD1D6RA91 191 aa13.85□□□□□ -0.19
CHRFAM7A-201ENST00000299847 TRIM13O60858 407 aa13.85□□□□□ -0.19
CHRFAM7A-201ENST00000299847 CCR4P51679 360 aa13.85□□□□□ -0.19
CHRFAM7A-201ENST00000299847 A1CFQ9NQ94 594 aaKnown RBP13.85□□□□□ -0.19
CHRFAM7A-201ENST00000299847 AVENQ9NQS1 362 aaPredicted RBP13.85□□□□□ -0.19
CHRFAM7A-201ENST00000299847 IL1RAPL1Q9NZN1 696 aa13.85□□□□□ -0.19
CHRFAM7A-201ENST00000299847 TPP1O14773 563 aa13.85□□□□□ -0.19
CHRFAM7A-201ENST00000299847 TYMPP19971 482 aa13.85□□□□□ -0.19
CHRFAM7A-201ENST00000299847 CYP2A7P20853 494 aa13.85□□□□□ -0.19
CHRFAM7A-201ENST00000299847 CNTN2Q02246 1040 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms