RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 ATXN2Q99700 1313 aaKnown RBP21.93■■□□□ 1.1
SMCO4-201ENST00000298966 GTPBP2Q9BX10 602 aaKnown RBP21.93■■□□□ 1.1
SMCO4-201ENST00000298966 MRPL47Q9HD33 250 aaKnown RBP21.93■■□□□ 1.1
SMCO4-201ENST00000298966 WDR35Q9P2L0 1181 aa21.93■■□□□ 1.1
SMCO4-201ENST00000298966 CDH9Q9ULB4 789 aa21.93■■□□□ 1.1
SMCO4-201ENST00000298966 SLC6A14Q9UN76 642 aa21.93■■□□□ 1.1
SMCO4-201ENST00000298966 SCINQ9Y6U3 715 aa21.93■■□□□ 1.1
SMCO4-201ENST00000298966 MYO18AQ92614 2054 aaKnown RBP21.92■■□□□ 1.1
SMCO4-201ENST00000298966 APODP05090 189 aa21.92■■□□□ 1.1
SMCO4-201ENST00000298966 PFKLP17858 780 aa21.92■■□□□ 1.1
SMCO4-201ENST00000298966 ABCB4P21439 1286 aa21.92■■□□□ 1.1
SMCO4-201ENST00000298966 MMP8P22894 467 aa21.92■■□□□ 1.1
SMCO4-201ENST00000298966 HOXD12P35452 270 aa21.92■■□□□ 1.1
SMCO4-201ENST00000298966 TIE1P35590 1138 aa21.92■■□□□ 1.1
SMCO4-201ENST00000298966 GAB4Q2WGN9 574 aa21.92■■□□□ 1.1
SMCO4-201ENST00000298966 MON1BQ7L1V2 547 aa21.92■■□□□ 1.1
SMCO4-201ENST00000298966 PGBD3Q8N328 593 aa21.92■■□□□ 1.1
SMCO4-201ENST00000298966 CHCHD4Q8N4Q1 142 aa21.92■■□□□ 1.1
SMCO4-201ENST00000298966 CEP76Q8TAP6 659 aa21.92■■□□□ 1.1
SMCO4-201ENST00000298966 STK32AQ8WU08 396 aa21.92■■□□□ 1.1
SMCO4-201ENST00000298966 FUBP3Q96I24 572 aaKnown RBP eCLIP21.92■■□□□ 1.1
SMCO4-201ENST00000298966 PNKPQ96T60 521 aa21.92■■□□□ 1.1
SMCO4-201ENST00000298966 PKMYT1Q99640 499 aa21.92■■□□□ 1.1
SMCO4-201ENST00000298966 ZSWIM1Q9BR11 485 aa21.92■■□□□ 1.1
SMCO4-201ENST00000298966 THAP2Q9H0W7 228 aa21.92■■□□□ 1.1
SMCO4-201ENST00000298966 CYLDQ9NQC7 956 aa21.92■■□□□ 1.1
SMCO4-201ENST00000298966 ADAM22Q9P0K1 906 aa21.92■■□□□ 1.1
SMCO4-201ENST00000298966 MBD1Q9UIS9 605 aaPredicted RBP21.92■■□□□ 1.1
SMCO4-201ENST00000298966 PILRBQ9UKJ0 227 aa21.92■■□□□ 1.1
SMCO4-201ENST00000298966 JRKLQ9Y4A0 524 aa21.92■■□□□ 1.1
SMCO4-201ENST00000298966 FAM221BA6H8Z2 402 aa21.91■■□□□ 1.1
SMCO4-201ENST00000298966 SGK1O00141 431 aa21.91■■□□□ 1.1
SMCO4-201ENST00000298966 LEFTY2O00292 366 aa21.91■■□□□ 1.1
SMCO4-201ENST00000298966 OPHN1O60890 802 aa21.91■■□□□ 1.1
SMCO4-201ENST00000298966 CYP17A1P05093 508 aa21.91■■□□□ 1.1
SMCO4-201ENST00000298966 NOP2P46087 812 aaKnown RBP21.91■■□□□ 1.1
SMCO4-201ENST00000298966 GSCP56915 257 aaPredicted RBP21.91■■□□□ 1.1
SMCO4-201ENST00000298966 MAPRE1Q15691 268 aaKnown RBP21.91■■□□□ 1.1
SMCO4-201ENST00000298966 DUOXA1Q1HG43 343 aa21.91■■□□□ 1.1
SMCO4-201ENST00000298966 ZNF423Q2M1K9 1284 aa21.91■■□□□ 1.1
SMCO4-201ENST00000298966 MAP7D1Q3KQU3 841 aa21.91■■□□□ 1.1
SMCO4-201ENST00000298966 PEAR1Q5VY43 1037 aaPredicted RBP21.91■■□□□ 1.1
SMCO4-201ENST00000298966 ACOT1Q86TX2 421 aa21.91■■□□□ 1.1
SMCO4-201ENST00000298966 PROSER1Q86XN7 944 aa21.91■■□□□ 1.1
SMCO4-201ENST00000298966 FRMD1Q8N878 549 aa21.91■■□□□ 1.1
SMCO4-201ENST00000298966 IL17RCQ8NAC3 791 aa21.91■■□□□ 1.1
SMCO4-201ENST00000298966 B3GALNT2Q8NCR0 500 aa21.91■■□□□ 1.1
SMCO4-201ENST00000298966 HMGB4Q8WW32 186 aa21.91■■□□□ 1.1
SMCO4-201ENST00000298966 TRPM5Q9NZQ8 1165 aa21.91■■□□□ 1.1
SMCO4-201ENST00000298966 SALL4Q9UJQ4 1053 aa21.91■■□□□ 1.1
SMCO4-201ENST00000298966 TSPAN16Q9UKR8 245 aa21.91■■□□□ 1.1
SMCO4-201ENST00000298966 MYOFQ9NZM1 2061 aa21.91■■□□□ 1.1
SMCO4-201ENST00000298966 M0QYV0 167 aa21.9■■□□□ 1.1
SMCO4-201ENST00000298966 SLC9A3R1O14745 358 aaPredicted RBP21.9■■□□□ 1.1
SMCO4-201ENST00000298966 MOCS3O95396 460 aa21.9■■□□□ 1.1
SMCO4-201ENST00000298966 ITPKAP23677 461 aa21.9■■□□□ 1.1
SMCO4-201ENST00000298966 EIF2DP41214 584 aaKnown RBP21.9■■□□□ 1.1
SMCO4-201ENST00000298966 MAGEA11P43364 429 aa21.9■■□□□ 1.1
SMCO4-201ENST00000298966 BCAT1P54687 386 aa21.9■■□□□ 1.1
SMCO4-201ENST00000298966 SLC8A3P57103 927 aa21.9■■□□□ 1.1
SMCO4-201ENST00000298966 HNRNPDQ14103 355 aaKnown RBP21.9■■□□□ 1.1
SMCO4-201ENST00000298966 DHCR24Q15392 516 aa21.9■■□□□ 1.1
SMCO4-201ENST00000298966 ERICH1Q86X53 443 aa21.9■■□□□ 1.1
SMCO4-201ENST00000298966 SLC35G2Q8TBE7 412 aa21.9■■□□□ 1.1
SMCO4-201ENST00000298966 IPO4Q8TEX9 1081 aaKnown RBP21.9■■□□□ 1.1
SMCO4-201ENST00000298966 CPA5Q8WXQ8 436 aa21.9■■□□□ 1.1
SMCO4-201ENST00000298966 HNRNPABQ99729 332 aaKnown RBP21.9■■□□□ 1.1
SMCO4-201ENST00000298966 CTTNBP2NLQ9P2B4 639 aa21.9■■□□□ 1.1
SMCO4-201ENST00000298966 CNOT8Q9UFF9 292 aaKnown RBP21.9■■□□□ 1.1
SMCO4-201ENST00000298966 CAPN6Q9Y6Q1 641 aa21.9■■□□□ 1.1
SMCO4-201ENST00000298966 KAT7O95251 611 aa21.89■■□□□ 1.09
SMCO4-201ENST00000298966 SLC6A11P48066 632 aa21.89■■□□□ 1.09
SMCO4-201ENST00000298966 CCDC142Q17RM4 750 aa21.89■■□□□ 1.09
SMCO4-201ENST00000298966 C4orf50Q6ZRC1 276 aa21.89■■□□□ 1.09
SMCO4-201ENST00000298966 RABEPKQ7Z6M1 372 aa21.89■■□□□ 1.09
SMCO4-201ENST00000298966 OSTM1Q86WC4 334 aa21.89■■□□□ 1.09
SMCO4-201ENST00000298966 PASD1Q8IV76 773 aa21.89■■□□□ 1.09
SMCO4-201ENST00000298966 ADGRG2Q8IZP9 1017 aa21.89■■□□□ 1.09
SMCO4-201ENST00000298966 KIAA1958Q8N8K9 716 aa21.89■■□□□ 1.09
SMCO4-201ENST00000298966 ANKRD52Q8NB46 1076 aa21.89■■□□□ 1.09
SMCO4-201ENST00000298966 C1orf131Q8NDD1 294 aaKnown RBP21.89■■□□□ 1.09
SMCO4-201ENST00000298966 TPCN2Q8NHX9 752 aa21.89■■□□□ 1.09
SMCO4-201ENST00000298966 SYT15Q9BQS2 421 aa21.89■■□□□ 1.09
SMCO4-201ENST00000298966 FSCN3Q9NQT6 498 aa21.89■■□□□ 1.09
SMCO4-201ENST00000298966 ARHGEF4Q9NR80 690 aa21.89■■□□□ 1.09
SMCO4-201ENST00000298966 TCRBV21S2A2A0A5A6 115 aa21.88■■□□□ 1.09
SMCO4-201ENST00000298966 RIOK3O14730 519 aaKnown RBP21.88■■□□□ 1.09
SMCO4-201ENST00000298966 URI1O94763 535 aaPredicted RBP21.88■■□□□ 1.09
SMCO4-201ENST00000298966 CALCAP01258 141 aa21.88■■□□□ 1.09
SMCO4-201ENST00000298966 SERPINF2P08697 491 aa21.88■■□□□ 1.09
SMCO4-201ENST00000298966 PTPN1P18031 435 aaKnown RBP21.88■■□□□ 1.09
SMCO4-201ENST00000298966 GPD2P43304 727 aa21.88■■□□□ 1.09
SMCO4-201ENST00000298966 ZXDBP98169 803 aa21.88■■□□□ 1.09
SMCO4-201ENST00000298966 GOLGA7BQ2TAP0 167 aa21.88■■□□□ 1.09
SMCO4-201ENST00000298966 PKDCCQ504Y2 493 aa21.88■■□□□ 1.09
SMCO4-201ENST00000298966 PAPD7Q5XG87 772 aaKnown RBP21.88■■□□□ 1.09
SMCO4-201ENST00000298966 C11orf63Q6NUN7 778 aa21.88■■□□□ 1.09
SMCO4-201ENST00000298966 DENND1BQ6P3S1 775 aa21.88■■□□□ 1.09
SMCO4-201ENST00000298966 SLC36A4Q6YBV0 504 aa21.88■■□□□ 1.09
SMCO4-201ENST00000298966 RAB44Q7Z6P3 723 aaPredicted RBP21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms