RNA–Protein interactions for RNA: ENST00000297977.9

HDX-201, Transcript of highly divergent homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDX, Length 6,200 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDX-201ENST00000297977 THOC5Q13769 683 aaKnown RBP3.2□□□□□ -1.9
HDX-201ENST00000297977 NR1I3Q14994 352 aa3.2□□□□□ -1.9
HDX-201ENST00000297977 UBXN2BQ14CS0 331 aa3.2□□□□□ -1.9
HDX-201ENST00000297977 IL17AQ16552 155 aa3.2□□□□□ -1.9
HDX-201ENST00000297977 ECM1Q16610 540 aa3.2□□□□□ -1.9
HDX-201ENST00000297977 DDR2Q16832 855 aa3.2□□□□□ -1.9
HDX-201ENST00000297977 ZNF284Q2VY69 593 aa3.2□□□□□ -1.9
HDX-201ENST00000297977 PRSS55Q6UWB4 352 aaPredicted RBP3.2□□□□□ -1.9
HDX-201ENST00000297977 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.2□□□□□ -1.9
HDX-201ENST00000297977 SLC26A9Q7LBE3 791 aa3.2□□□□□ -1.9
HDX-201ENST00000297977 EFL1Q7Z2Z2 1120 aaKnown RBP3.2□□□□□ -1.9
HDX-201ENST00000297977 SDCCAG8Q86SQ7 713 aaPredicted RBP3.2□□□□□ -1.9
HDX-201ENST00000297977 COLGALT2Q8IYK4 626 aa3.2□□□□□ -1.9
HDX-201ENST00000297977 FAM71AQ8IYT1 594 aa3.2□□□□□ -1.9
HDX-201ENST00000297977 RGL4Q8IZJ4 473 aa3.2□□□□□ -1.9
HDX-201ENST00000297977 CARNMT1Q8N4J0 409 aa3.2□□□□□ -1.9
HDX-201ENST00000297977 RIN3Q8TB24 985 aa3.2□□□□□ -1.9
HDX-201ENST00000297977 CCT6BQ92526 530 aa3.2□□□□□ -1.9
HDX-201ENST00000297977 SMARCD2Q92925 531 aa3.2□□□□□ -1.9
HDX-201ENST00000297977 CENPTQ96BT3 561 aa3.2□□□□□ -1.9
HDX-201ENST00000297977 TSSK1BQ9BXA7 367 aa3.2□□□□□ -1.9
HDX-201ENST00000297977 CDH7Q9ULB5 785 aa3.2□□□□□ -1.9
HDX-201ENST00000297977 SATB2Q9UPW6 733 aa3.2□□□□□ -1.9
HDX-201ENST00000297977 PPP2R2CQ9Y2T4 447 aa3.2□□□□□ -1.9
HDX-201ENST00000297977 HEY1Q9Y5J3 304 aa3.2□□□□□ -1.9
HDX-201ENST00000297977 AP1M2Q9Y6Q5 423 aa3.2□□□□□ -1.9
HDX-201ENST00000297977 COL4A5P29400 1685 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 LRRC72A6NJI9 287 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 RBAK-RBAKDNI3L0D1 243 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 SGK1O00141 431 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 PER2O15055 1255 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 CCL16O15467 120 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 BAG2O95816 211 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 DNTTP04053 509 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 PSMC3P17980 439 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 HOXA11P31270 313 aaPredicted RBP3.19□□□□□ -1.9
HDX-201ENST00000297977 CHRNA3P32297 505 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 TTKP33981 857 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 COPS2P61201 443 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 ADCY2Q08462 1091 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 COL9A3Q14050 684 aaPredicted RBP3.19□□□□□ -1.9
HDX-201ENST00000297977 DMC1Q14565 340 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 MARCH8Q5T0T0 291 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 GKAP1Q5VSY0 366 aaPredicted RBP3.19□□□□□ -1.9
HDX-201ENST00000297977 SPOPLQ6IQ16 392 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 NAPEPLDQ6IQ20 393 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 PTCRAQ6ISU1 281 aaPredicted RBP3.19□□□□□ -1.9
HDX-201ENST00000297977 STRADAQ7RTN6 431 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 LGI2Q8N0V4 545 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 FAM172AQ8WUF8 416 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 CPA5Q8WXQ8 436 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 ZBTB10Q96DT7 871 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 PGM2Q96G03 612 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 MCEEQ96PE7 176 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 KLHL5Q96PQ7 755 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 PPP1R10Q96QC0 940 aaKnown RBP3.19□□□□□ -1.9
HDX-201ENST00000297977 TRIM54Q9BYV2 358 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 SLC7A5P2Q9GIP4 190 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 DUS2Q9NX74 493 aaKnown RBP3.19□□□□□ -1.9
HDX-201ENST00000297977 ERVW-1Q9UQF0 538 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 MAD1L1Q9Y6D9 718 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 FAM186AA6NE01 2351 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 COL11A2P13942 1736 aaPredicted RBP3.19□□□□□ -1.9
HDX-201ENST00000297977 CCDC163A0A0D9SF12 145 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 E2F8A0AVK6 867 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 MTMR11A4FU01 709 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 SLC38A8A6NNN8 435 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 ZNF487B1APH4 448 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 PIRO00625 290 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 AREL1O15033 823 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 TEX33O43247 280 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 MTA2O94776 668 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 STAMBPO95630 424 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 C4BPAP04003 597 aaKnown RBP3.19□□□□□ -1.9
HDX-201ENST00000297977 EIF2S1P05198 315 aaKnown RBP3.19□□□□□ -1.9
HDX-201ENST00000297977 RRM1P23921 792 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 SERPINA4P29622 427 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 OR1E1P30953 314 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 MAGEA8P43361 318 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 THOP1P52888 689 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 PRAMEP78395 509 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 ADAM17P78536 824 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 USP4Q13107 963 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 RIPK1Q13546 671 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 CBX2Q14781 532 aaPredicted RBP3.19□□□□□ -1.9
HDX-201ENST00000297977 ZCWPW2Q504Y3 356 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 FNDC3BQ53EP0 1204 aaKnown RBP3.19□□□□□ -1.9
HDX-201ENST00000297977 MARC1Q5VT66 337 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 LINC00299Q6ZSB3 139 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 FAM131BQ86XD5 332 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 MAB21L3Q8N8X9 362 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 RNF217Q8TC41 542 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 DYDC1Q8WWB3 177 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 CFAP36Q96G28 342 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 PRRX2Q99811 253 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 ADGRE3Q9BY15 652 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 TRIM8Q9BZR9 551 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 YIPF3Q9GZM5 350 aa3.19□□□□□ -1.9
HDX-201ENST00000297977 CACYBPQ9HB71 228 aaKnown RBP3.19□□□□□ -1.9
HDX-201ENST00000297977 CDHR5Q9HBB8 845 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms