RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 HHLA1C9JL84 531 aa12.12□□□□□ -0.47
RHO-201ENST00000296271 GOLGA8TH3BQL2 631 aa12.12□□□□□ -0.47
RHO-201ENST00000296271 SMAPO00193 183 aa12.12□□□□□ -0.47
RHO-201ENST00000296271 TM9SF1O15321 606 aa12.12□□□□□ -0.47
RHO-201ENST00000296271 B4GALT3O60512 393 aa12.12□□□□□ -0.47
RHO-201ENST00000296271 CCNB1P14635 433 aa12.12□□□□□ -0.47
RHO-201ENST00000296271 DESP17661 470 aa12.12□□□□□ -0.47
RHO-201ENST00000296271 EPHB2P29323 1055 aa12.12□□□□□ -0.47
RHO-201ENST00000296271 SERPINB3P29508 390 aa12.12□□□□□ -0.47
RHO-201ENST00000296271 THPOP40225 353 aa12.12□□□□□ -0.47
RHO-201ENST00000296271 RGS2P41220 211 aa12.12□□□□□ -0.47
RHO-201ENST00000296271 NR2C2P49116 596 aa12.12□□□□□ -0.47
RHO-201ENST00000296271 SNX16P57768 344 aa12.12□□□□□ -0.47
RHO-201ENST00000296271 PRKD1Q15139 912 aaPredicted RBP12.12□□□□□ -0.47
RHO-201ENST00000296271 STAMBPL1Q96FJ0 436 aa12.12□□□□□ -0.47
RHO-201ENST00000296271 VPS11Q9H270 941 aa12.12□□□□□ -0.47
RHO-201ENST00000296271 PPCSQ9HAB8 311 aa12.12□□□□□ -0.47
RHO-201ENST00000296271 ACSS2Q9NR19 701 aa12.12□□□□□ -0.47
RHO-201ENST00000296271 PCDHA11Q9Y5I1 949 aa12.12□□□□□ -0.47
RHO-201ENST00000296271 DCLK1O15075 740 aa12.12□□□□□ -0.47
RHO-201ENST00000296271 B3GAT3O94766 335 aa12.12□□□□□ -0.47
RHO-201ENST00000296271 OR4Q2P0C623 313 aa12.12□□□□□ -0.47
RHO-201ENST00000296271 TPH1P17752 444 aa12.12□□□□□ -0.47
RHO-201ENST00000296271 BST1Q10588 318 aa12.12□□□□□ -0.47
RHO-201ENST00000296271 ZBTB17Q13105 803 aa12.12□□□□□ -0.47
RHO-201ENST00000296271 ARHGAP36Q6ZRI8 547 aa12.12□□□□□ -0.47
RHO-201ENST00000296271 ALYREFQ86V81 257 aaKnown RBP12.12□□□□□ -0.47
RHO-201ENST00000296271 USP33Q8TEY7 942 aa12.12□□□□□ -0.47
RHO-201ENST00000296271 MYLPFQ96A32 169 aa12.12□□□□□ -0.47
RHO-201ENST00000296271 MOCOSQ96EN8 888 aa12.12□□□□□ -0.47
RHO-201ENST00000296271 APBA2Q99767 749 aa12.12□□□□□ -0.47
RHO-201ENST00000296271 TMEM120AQ9BXJ8 343 aa12.12□□□□□ -0.47
RHO-201ENST00000296271 ARL8BQ9NVJ2 186 aa12.12□□□□□ -0.47
RHO-201ENST00000296271 PLLPQ9Y342 182 aa12.12□□□□□ -0.47
RHO-201ENST00000296271 IGHA2P01877 340 aa12.11□□□□□ -0.47
RHO-201ENST00000296271 ALDOAP04075 364 aaKnown RBP12.11□□□□□ -0.47
RHO-201ENST00000296271 ALADP13716 330 aa12.11□□□□□ -0.47
RHO-201ENST00000296271 AKR1A1P14550 325 aa12.11□□□□□ -0.47
RHO-201ENST00000296271 TPSB2P20231 275 aa12.11□□□□□ -0.47
RHO-201ENST00000296271 SLC8A3P57103 927 aa12.11□□□□□ -0.47
RHO-201ENST00000296271 TPSAB1Q15661 275 aa12.11□□□□□ -0.47
RHO-201ENST00000296271 CHI3L2Q15782 390 aa12.11□□□□□ -0.47
RHO-201ENST00000296271 CTC1Q2NKJ3 1217 aa12.11□□□□□ -0.47
RHO-201ENST00000296271 CD300LGQ6UXG3 332 aa12.11□□□□□ -0.47
RHO-201ENST00000296271 ARCQ7LC44 396 aa12.11□□□□□ -0.47
RHO-201ENST00000296271 OR10T2Q8NGX3 314 aa12.11□□□□□ -0.47
RHO-201ENST00000296271 SENP6Q9GZR1 1112 aaPredicted RBP12.11□□□□□ -0.47
RHO-201ENST00000296271 MOCS1Q9NZB8 636 aa12.11□□□□□ -0.47
RHO-201ENST00000296271 PADI3Q9ULW8 664 aa12.11□□□□□ -0.47
RHO-201ENST00000296271 TRPV2Q9Y5S1 764 aa12.11□□□□□ -0.47
RHO-201ENST00000296271 H3BRJ5 948 aa12.11□□□□□ -0.47
RHO-201ENST00000296271 CHUKO15111 745 aa12.11□□□□□ -0.47
RHO-201ENST00000296271 ZBTB24O43167 697 aaPredicted RBP12.11□□□□□ -0.47
RHO-201ENST00000296271 LYPLA1O75608 230 aaPredicted RBP12.11□□□□□ -0.47
RHO-201ENST00000296271 KRT37O76014 449 aa12.11□□□□□ -0.47
RHO-201ENST00000296271 DLDP09622 509 aaKnown RBP12.11□□□□□ -0.47
RHO-201ENST00000296271 SRGAP2BP0DMP2 458 aa12.11□□□□□ -0.47
RHO-201ENST00000296271 MYL2P10916 166 aa12.11□□□□□ -0.47
RHO-201ENST00000296271 TSHRP16473 764 aa12.11□□□□□ -0.47
RHO-201ENST00000296271 ZFXP17010 805 aaPredicted RBP12.11□□□□□ -0.47
RHO-201ENST00000296271 GM2AP17900 193 aa12.11□□□□□ -0.47
RHO-201ENST00000296271 CD68P34810 354 aaPredicted RBP12.11□□□□□ -0.47
RHO-201ENST00000296271 SETDB1Q15047 1291 aa12.11□□□□□ -0.47
RHO-201ENST00000296271 PCBP1Q15365 356 aaKnown RBP eCLIP12.11□□□□□ -0.47
RHO-201ENST00000296271 UPP1Q16831 310 aa12.11□□□□□ -0.47
RHO-201ENST00000296271 SDHAF4Q5VUM1 108 aa12.11□□□□□ -0.47
RHO-201ENST00000296271 CLNKQ7Z7G1 428 aa12.11□□□□□ -0.47
RHO-201ENST00000296271 ACVR1CQ8NER5 493 aa12.11□□□□□ -0.47
RHO-201ENST00000296271 KCTD13Q8WZ19 329 aa12.11□□□□□ -0.47
RHO-201ENST00000296271 ATP2A3Q93084 1043 aa12.11□□□□□ -0.47
RHO-201ENST00000296271 ZNF419Q96HQ0 510 aaPredicted RBP12.11□□□□□ -0.47
RHO-201ENST00000296271 AGAP2Q99490 1192 aa12.11□□□□□ -0.47
RHO-201ENST00000296271 SIK2Q9H0K1 926 aa12.11□□□□□ -0.47
RHO-201ENST00000296271 TRMT13Q9NUP7 481 aaKnown RBP12.11□□□□□ -0.47
RHO-201ENST00000296271 ZFP69BQ9UJL9 534 aa12.11□□□□□ -0.47
RHO-201ENST00000296271 SCN10AQ9Y5Y9 1956 aa12.1□□□□□ -0.47
RHO-201ENST00000296271 MSI1O43347 362 aaKnown RBP12.1□□□□□ -0.47
RHO-201ENST00000296271 LTFP02788 710 aa12.1□□□□□ -0.47
RHO-201ENST00000296271 PTPN3P26045 913 aa12.1□□□□□ -0.47
RHO-201ENST00000296271 SCNN1AP37088 669 aa12.1□□□□□ -0.47
RHO-201ENST00000296271 CPA2P48052 419 aa12.1□□□□□ -0.47
RHO-201ENST00000296271 GTF2A1P52655 376 aaPredicted RBP12.1□□□□□ -0.47
RHO-201ENST00000296271 CRYMQ14894 314 aa12.1□□□□□ -0.47
RHO-201ENST00000296271 CERCAMQ5T4B2 595 aa12.1□□□□□ -0.47
RHO-201ENST00000296271 CMC1Q7Z7K0 106 aa12.1□□□□□ -0.47
RHO-201ENST00000296271 GBP7Q8N8V2 638 aaPredicted RBP12.1□□□□□ -0.47
RHO-201ENST00000296271 ALKBH8Q96BT7 664 aaKnown RBP12.1□□□□□ -0.47
RHO-201ENST00000296271 ZNF778Q96MU6 729 aa12.1□□□□□ -0.47
RHO-201ENST00000296271 MIPEPQ99797 713 aa12.1□□□□□ -0.47
RHO-201ENST00000296271 KATNAL1Q9BW62 490 aa12.1□□□□□ -0.47
RHO-201ENST00000296271 IQCGQ9H095 443 aaKnown RBP12.1□□□□□ -0.47
RHO-201ENST00000296271 TKTL2Q9H0I9 626 aa12.1□□□□□ -0.47
RHO-201ENST00000296271 KLHL8Q9P2G9 620 aaPredicted RBP12.1□□□□□ -0.47
RHO-201ENST00000296271 STAP1Q9ULZ2 295 aa12.1□□□□□ -0.47
RHO-201ENST00000296271 ZNF236Q9UL36 1845 aa12.1□□□□□ -0.47
RHO-201ENST00000296271 CFAP73A6NFT4 308 aa12.1□□□□□ -0.47
RHO-201ENST00000296271 M0QZ92 97 aa12.1□□□□□ -0.47
RHO-201ENST00000296271 C2CD2LO14523 706 aa12.1□□□□□ -0.47
RHO-201ENST00000296271 TPP1O14773 563 aa12.1□□□□□ -0.47
RHO-201ENST00000296271 ITM2AO43736 263 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms