RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 STRA8Q7Z7C7 330 aa13.76□□□□□ -0.21
HPS3-201ENST00000296051 RBM23Q86U06 439 aaKnown RBP13.76□□□□□ -0.21
HPS3-201ENST00000296051 ULK2Q8IYT8 1036 aa13.76□□□□□ -0.21
HPS3-201ENST00000296051 RBM15BQ8NDT2 890 aaKnown RBP13.76□□□□□ -0.21
HPS3-201ENST00000296051 TMEM79Q9BSE2 394 aa13.76□□□□□ -0.21
HPS3-201ENST00000296051 RNPEPQ9H4A4 650 aa13.76□□□□□ -0.21
HPS3-201ENST00000296051 AVENQ9NQS1 362 aaPredicted RBP13.76□□□□□ -0.21
HPS3-201ENST00000296051 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.76□□□□□ -0.21
HPS3-201ENST00000296051 IPPQ9Y573 584 aa13.76□□□□□ -0.21
HPS3-201ENST00000296051 IFT172Q9UG01 1749 aa13.76□□□□□ -0.21
HPS3-201ENST00000296051 KCNK1O00180 336 aa13.76□□□□□ -0.21
HPS3-201ENST00000296051 RNASEH1O60930 286 aaKnown RBP13.76□□□□□ -0.21
HPS3-201ENST00000296051 NDUFS3O75489 264 aa13.76□□□□□ -0.21
HPS3-201ENST00000296051 HIST1H2AGP0C0S8 130 aaPredicted RBP13.76□□□□□ -0.21
HPS3-201ENST00000296051 THRAP10827 490 aa13.76□□□□□ -0.21
HPS3-201ENST00000296051 SLC2A3P11169 496 aa13.76□□□□□ -0.21
HPS3-201ENST00000296051 TPH1P17752 444 aa13.76□□□□□ -0.21
HPS3-201ENST00000296051 HIST1H2ADP20671 130 aa13.76□□□□□ -0.21
HPS3-201ENST00000296051 POLD3Q15054 466 aaPredicted RBP13.76□□□□□ -0.21
HPS3-201ENST00000296051 BOLA3Q53S33 107 aa13.76□□□□□ -0.21
HPS3-201ENST00000296051 PPM1LQ5SGD2 360 aa13.76□□□□□ -0.21
HPS3-201ENST00000296051 OTOP2Q7RTS6 562 aa13.76□□□□□ -0.21
HPS3-201ENST00000296051 RAB42Q8N4Z0 105 aa13.76□□□□□ -0.21
HPS3-201ENST00000296051 HIST1H2AHQ96KK5 128 aa13.76□□□□□ -0.21
HPS3-201ENST00000296051 HIST1H2AJQ99878 128 aa13.76□□□□□ -0.21
HPS3-201ENST00000296051 H2AFJQ9BTM1 129 aa13.76□□□□□ -0.21
HPS3-201ENST00000296051 CADM1Q9BY67 442 aaKnown RBP13.76□□□□□ -0.21
HPS3-201ENST00000296051 TCF7L2Q9NQB0 619 aa13.76□□□□□ -0.21
HPS3-201ENST00000296051 PDGFCQ9NRA1 345 aa13.76□□□□□ -0.21
HPS3-201ENST00000296051 DSEQ9UL01 958 aa13.76□□□□□ -0.21
HPS3-201ENST00000296051 ACTL7BQ9Y614 415 aa13.76□□□□□ -0.21
HPS3-201ENST00000296051 WDR27A2RRH5 827 aa13.75□□□□□ -0.21
HPS3-201ENST00000296051 TLL1O43897 1013 aa13.75□□□□□ -0.21
HPS3-201ENST00000296051 HMGCRP04035 888 aa13.75□□□□□ -0.21
HPS3-201ENST00000296051 SKIV2L2P42285 1042 aaKnown RBP13.75□□□□□ -0.21
HPS3-201ENST00000296051 C15orf59Q2T9L4 293 aaPredicted RBP13.75□□□□□ -0.21
HPS3-201ENST00000296051 UNC45BQ8IWX7 931 aa13.75□□□□□ -0.21
HPS3-201ENST00000296051 GIPC2Q8TF65 315 aa13.75□□□□□ -0.21
HPS3-201ENST00000296051 EDEM1Q92611 657 aa13.75□□□□□ -0.21
HPS3-201ENST00000296051 TRIM15Q9C019 465 aa13.75□□□□□ -0.21
HPS3-201ENST00000296051 EFCAB1Q9HAE3 211 aa13.75□□□□□ -0.21
HPS3-201ENST00000296051 THAP1Q9NVV9 213 aa13.75□□□□□ -0.21
HPS3-201ENST00000296051 TMEM59LQ9UK28 342 aa13.75□□□□□ -0.21
HPS3-201ENST00000296051 MROH7Q68CQ1 1323 aa13.75□□□□□ -0.21
HPS3-201ENST00000296051 NRCAMQ92823 1304 aa13.75□□□□□ -0.21
HPS3-201ENST00000296051 CFAP99D6REC4 459 aa13.75□□□□□ -0.21
HPS3-201ENST00000296051 DDHD2O94830 711 aa13.75□□□□□ -0.21
HPS3-201ENST00000296051 MYBPC2Q14324 1141 aa13.75□□□□□ -0.21
HPS3-201ENST00000296051 FUT11Q495W5 492 aa13.75□□□□□ -0.21
HPS3-201ENST00000296051 CELF3Q5SZQ8 465 aaKnown RBP13.75□□□□□ -0.21
HPS3-201ENST00000296051 ZBTB49Q6ZSB9 765 aa13.75□□□□□ -0.21
HPS3-201ENST00000296051 OR6Y1Q8NGX8 325 aa13.75□□□□□ -0.21
HPS3-201ENST00000296051 ECSITQ9BQ95 431 aa13.75□□□□□ -0.21
HPS3-201ENST00000296051 PCDHB5Q9Y5E4 795 aa13.75□□□□□ -0.21
HPS3-201ENST00000296051 CNTNAP2Q9UHC6 1331 aa13.75□□□□□ -0.21
HPS3-201ENST00000296051 ACKR2O00590 384 aa13.75□□□□□ -0.21
HPS3-201ENST00000296051 JAM2P57087 298 aa13.75□□□□□ -0.21
HPS3-201ENST00000296051 FBXW4P57775 412 aa13.75□□□□□ -0.21
HPS3-201ENST00000296051 PPP1R15BQ5SWA1 713 aa13.75□□□□□ -0.21
HPS3-201ENST00000296051 MARK2Q7KZI7 788 aaKnown RBP13.75□□□□□ -0.21
HPS3-201ENST00000296051 FIBCD1Q8N539 461 aa13.75□□□□□ -0.21
HPS3-201ENST00000296051 HIPK3Q9H422 1215 aa13.75□□□□□ -0.21
HPS3-201ENST00000296051 RECQL4O94761 1208 aa13.75□□□□□ -0.21
HPS3-201ENST00000296051 FSTL1Q12841 308 aa13.75□□□□□ -0.21
HPS3-201ENST00000296051 PEX6Q13608 980 aa13.75□□□□□ -0.21
HPS3-201ENST00000296051 ITIH5Q86UX2 942 aa13.75□□□□□ -0.21
HPS3-201ENST00000296051 PCDH20Q8N6Y1 951 aaKnown RBP13.75□□□□□ -0.21
HPS3-201ENST00000296051 IL31RAQ8NI17 732 aa13.75□□□□□ -0.21
HPS3-201ENST00000296051 CYLDQ9NQC7 956 aa13.75□□□□□ -0.21
HPS3-201ENST00000296051 PKD2L2Q9NZM6 624 aa13.75□□□□□ -0.21
HPS3-201ENST00000296051 NDUFA13Q9P0J0 144 aa13.75□□□□□ -0.21
HPS3-201ENST00000296051 MYH6P13533 1939 aa13.74□□□□□ -0.21
HPS3-201ENST00000296051 ZMYM2Q9UBW7 1377 aa13.74□□□□□ -0.21
HPS3-201ENST00000296051 TMEM247A6NEH6 219 aa13.74□□□□□ -0.21
HPS3-201ENST00000296051 SDR42E2A6NKP2 422 aa13.74□□□□□ -0.21
HPS3-201ENST00000296051 SMAPO00193 183 aa13.74□□□□□ -0.21
HPS3-201ENST00000296051 XYLBO75191 536 aa13.74□□□□□ -0.21
HPS3-201ENST00000296051 FAM58BPP0C7Q3 252 aa13.74□□□□□ -0.21
HPS3-201ENST00000296051 ALADP13716 330 aa13.74□□□□□ -0.21
HPS3-201ENST00000296051 MUTP22033 750 aa13.74□□□□□ -0.21
HPS3-201ENST00000296051 ADARP55265 1226 aaKnown RBP13.74□□□□□ -0.21
HPS3-201ENST00000296051 PDK3Q15120 406 aa13.74□□□□□ -0.21
HPS3-201ENST00000296051 ACSBG2Q5FVE4 666 aa13.74□□□□□ -0.21
HPS3-201ENST00000296051 SEL1L3Q68CR1 1132 aa13.74□□□□□ -0.21
HPS3-201ENST00000296051 CLVS1Q8IUQ0 354 aaPredicted RBP13.74□□□□□ -0.21
HPS3-201ENST00000296051 KIAA0319LQ8IZA0 1049 aa13.74□□□□□ -0.21
HPS3-201ENST00000296051 FOPNLQ96NB1 174 aa13.74□□□□□ -0.21
HPS3-201ENST00000296051 GORASP1Q9BQQ3 440 aa13.74□□□□□ -0.21
HPS3-201ENST00000296051 UBR1Q8IWV7 1749 aa13.74□□□□□ -0.21
HPS3-201ENST00000296051 TCRBV9S1A1TA0A576 114 aa13.74□□□□□ -0.21
HPS3-201ENST00000296051 NT5C1B-RDH14C9J2C7 533 aa13.74□□□□□ -0.21
HPS3-201ENST00000296051 TOMM70O94826 608 aa13.74□□□□□ -0.21
HPS3-201ENST00000296051 CD52P31358 61 aa13.74□□□□□ -0.21
HPS3-201ENST00000296051 ALLCQ8N6M5 410 aa13.74□□□□□ -0.21
HPS3-201ENST00000296051 TDRD5Q8NAT2 981 aaKnown RBP13.74□□□□□ -0.21
HPS3-201ENST00000296051 KYQ8NBH2 561 aa13.74□□□□□ -0.21
HPS3-201ENST00000296051 ZNF558Q96NG5 402 aa13.74□□□□□ -0.21
HPS3-201ENST00000296051 TRAPPC9Q96Q05 1148 aa13.74□□□□□ -0.21
HPS3-201ENST00000296051 PORCNQ9H237 461 aa13.74□□□□□ -0.21
HPS3-201ENST00000296051 COG4Q9H9E3 785 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms