RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 GRK2P25098 689 aa15.1■□□□□ 0.01
CCNF-201ENST00000293968 ARL4AP40617 200 aa15.1■□□□□ 0.01
CCNF-201ENST00000293968 USP46P62068 366 aa15.1■□□□□ 0.01
CCNF-201ENST00000293968 GHRHRQ02643 423 aa15.1■□□□□ 0.01
CCNF-201ENST00000293968 MAP3K10Q02779 954 aa15.1■□□□□ 0.01
CCNF-201ENST00000293968 PMF1Q6P1K2 205 aa15.1■□□□□ 0.01
CCNF-201ENST00000293968 FAM131BQ86XD5 332 aa15.1■□□□□ 0.01
CCNF-201ENST00000293968 ZSCAN18Q8TBC5 510 aaPredicted RBP15.1■□□□□ 0.01
CCNF-201ENST00000293968 ACTRT2Q8TDY3 377 aa15.1■□□□□ 0.01
CCNF-201ENST00000293968 SEPT1Q8WYJ6 367 aa15.1■□□□□ 0.01
CCNF-201ENST00000293968 TSNARE1Q96NA8 513 aa15.1■□□□□ 0.01
CCNF-201ENST00000293968 PHF12Q96QT6 1004 aa15.1■□□□□ 0.01
CCNF-201ENST00000293968 SERPINI1Q99574 410 aa15.1■□□□□ 0.01
CCNF-201ENST00000293968 APOL2Q9BQE5 337 aa15.1■□□□□ 0.01
CCNF-201ENST00000293968 AS3MTQ9HBK9 375 aa15.1■□□□□ 0.01
CCNF-201ENST00000293968 COPG2Q9UBF2 871 aa15.1■□□□□ 0.01
CCNF-201ENST00000293968 PPP1R1BQ9UD71 204 aaPredicted RBP15.1■□□□□ 0.01
CCNF-201ENST00000293968 EMCNQ9ULC0 261 aa15.1■□□□□ 0.01
CCNF-201ENST00000293968 AP4E1Q9UPM8 1137 aa15.1■□□□□ 0.01
CCNF-201ENST00000293968 SNX9Q9Y5X1 595 aa15.1■□□□□ 0.01
CCNF-201ENST00000293968 BCLAF3A2AJT9 711 aaKnown RBP15.1■□□□□ 0.01
CCNF-201ENST00000293968 CCNT2O60583 730 aaKnown RBP15.1■□□□□ 0.01
CCNF-201ENST00000293968 EPHA3P29320 983 aa15.1■□□□□ 0.01
CCNF-201ENST00000293968 IFRD2Q12894 506 aaPredicted RBP15.1■□□□□ 0.01
CCNF-201ENST00000293968 SLC10A2Q12908 348 aaPredicted RBP15.1■□□□□ 0.01
CCNF-201ENST00000293968 KLF10Q13118 480 aa15.1■□□□□ 0.01
CCNF-201ENST00000293968 MXD4Q14582 209 aaPredicted RBP15.1■□□□□ 0.01
CCNF-201ENST00000293968 DLG2Q15700 870 aa15.1■□□□□ 0.01
CCNF-201ENST00000293968 FAM43BQ6ZT52 329 aaPredicted RBP15.1■□□□□ 0.01
CCNF-201ENST00000293968 PID1Q7Z2X4 250 aa15.1■□□□□ 0.01
CCNF-201ENST00000293968 PYROXD2Q8N2H3 581 aa15.1■□□□□ 0.01
CCNF-201ENST00000293968 OR6B3Q8NGW1 331 aa15.1■□□□□ 0.01
CCNF-201ENST00000293968 PCYT2Q99447 389 aa15.1■□□□□ 0.01
CCNF-201ENST00000293968 FERMT1Q9BQL6 677 aa15.1■□□□□ 0.01
CCNF-201ENST00000293968 NT5C1AQ9BXI3 368 aa15.1■□□□□ 0.01
CCNF-201ENST00000293968 TCF7L2Q9NQB0 619 aa15.1■□□□□ 0.01
CCNF-201ENST00000293968 SYBUQ9NX95 663 aa15.1■□□□□ 0.01
CCNF-201ENST00000293968 C1QAP02745 245 aa15.1■□□□□ 0.01
CCNF-201ENST00000293968 TLR1Q15399 786 aa15.1■□□□□ 0.01
CCNF-201ENST00000293968 C6orf52Q5T4I8 152 aa15.1■□□□□ 0.01
CCNF-201ENST00000293968 STRA8Q7Z7C7 330 aa15.1■□□□□ 0.01
CCNF-201ENST00000293968 PQLC1Q8N2U9 271 aa15.1■□□□□ 0.01
CCNF-201ENST00000293968 HTR3CQ8WXA8 447 aa15.1■□□□□ 0.01
CCNF-201ENST00000293968 APBB2Q92870 758 aa15.1■□□□□ 0.01
CCNF-201ENST00000293968 GMLQ99445 158 aa15.1■□□□□ 0.01
CCNF-201ENST00000293968 PREBQ9HCU5 417 aa15.1■□□□□ 0.01
CCNF-201ENST00000293968 ADA2Q9NZK5 511 aa15.1■□□□□ 0.01
CCNF-201ENST00000293968 CDY2AQ9Y6F7 541 aa15.1■□□□□ 0.01
CCNF-201ENST00000293968 CDY1Q9Y6F8 540 aa15.1■□□□□ 0.01
CCNF-201ENST00000293968 PGGT1BP53609 377 aa15.1■□□□□ 0.01
CCNF-201ENST00000293968 FKBP1CQ5VVH2 108 aa15.1■□□□□ 0.01
CCNF-201ENST00000293968 PAOXQ6QHF9 649 aa15.1■□□□□ 0.01
CCNF-201ENST00000293968 FLAD1Q8NFF5 587 aa15.1■□□□□ 0.01
CCNF-201ENST00000293968 CATSPER2Q96P56 530 aa15.1■□□□□ 0.01
CCNF-201ENST00000293968 NUF2Q9BZD4 464 aa15.1■□□□□ 0.01
CCNF-201ENST00000293968 LTBP1Q14766 1721 aa15.09■□□□□ 0.01
CCNF-201ENST00000293968 LOXHD1Q8IVV2 1947 aa15.09■□□□□ 0.01
CCNF-201ENST00000293968 SF3B1O75533 1304 aaKnown RBP eCLIP15.09■□□□□ 0.012e-10■■■■■ 68.9
CCNF-201ENST00000293968 ZBTB14O43829 449 aa15.09■□□□□ 0.01
CCNF-201ENST00000293968 PDGFRBP09619 1106 aa15.09■□□□□ 0.01
CCNF-201ENST00000293968 EFCAB12Q6NXP0 572 aa15.09■□□□□ 0.01
CCNF-201ENST00000293968 TMC7Q7Z402 723 aa15.09■□□□□ 0.01
CCNF-201ENST00000293968 OR52B2Q96RD2 323 aa15.09■□□□□ 0.01
CCNF-201ENST00000293968 GALNT8Q9NY28 637 aa15.09■□□□□ 0.01
CCNF-201ENST00000293968 ATXN10Q9UBB4 475 aa15.09■□□□□ 0.01
CCNF-201ENST00000293968 AKT3Q9Y243 479 aa15.09■□□□□ 0.01
CCNF-201ENST00000293968 AP4B1Q9Y6B7 739 aa15.09■□□□□ 0.01
CCNF-201ENST00000293968 GPR25O00155 361 aa15.09■□□□□ 0.01
CCNF-201ENST00000293968 KCNK1O00180 336 aa15.09■□□□□ 0.01
CCNF-201ENST00000293968 XPO1O14980 1071 aaKnown RBP15.09■□□□□ 0.01
CCNF-201ENST00000293968 GOT1P17174 413 aa15.09■□□□□ 0.01
CCNF-201ENST00000293968 LSAMPQ13449 338 aa15.09■□□□□ 0.01
CCNF-201ENST00000293968 GK3PQ14409 553 aa15.09■□□□□ 0.01
CCNF-201ENST00000293968 PPP1R26Q5T8A7 1209 aaPredicted RBP15.09■□□□□ 0.01
CCNF-201ENST00000293968 CCNYL1Q8N7R7 359 aa15.09■□□□□ 0.01
CCNF-201ENST00000293968 DRAXINQ8NBI3 349 aaPredicted RBP15.09■□□□□ 0.01
CCNF-201ENST00000293968 FAM156AQ8NDB6 213 aa15.09■□□□□ 0.01
CCNF-201ENST00000293968 CLEC4CQ8WTT0 213 aa15.09■□□□□ 0.01
CCNF-201ENST00000293968 NIFKQ9BYG3 293 aaKnown RBP15.09■□□□□ 0.01
CCNF-201ENST00000293968 FAM96AQ9H5X1 160 aa15.09■□□□□ 0.01
CCNF-201ENST00000293968 KLHL8Q9P2G9 620 aaPredicted RBP15.09■□□□□ 0.01
CCNF-201ENST00000293968 FARP2O94887 1054 aaPredicted RBP15.09■□□□□ 0.01
CCNF-201ENST00000293968 PSMB4P28070 264 aa15.09■□□□□ 0.01
CCNF-201ENST00000293968 CCR10P46092 362 aa15.09■□□□□ 0.01
CCNF-201ENST00000293968 NRF1Q16656 503 aa15.09■□□□□ 0.01
CCNF-201ENST00000293968 ZNF534Q76KX8 674 aa15.09■□□□□ 0.01
CCNF-201ENST00000293968 MCUQ8NE86 351 aa15.09■□□□□ 0.01
CCNF-201ENST00000293968 BHLHE22Q8NFJ8 381 aaPredicted RBP15.09■□□□□ 0.01
CCNF-201ENST00000293968 SNRNP27Q8WVK2 155 aaKnown RBP15.09■□□□□ 0.01
CCNF-201ENST00000293968 MRPL1Q9BYD6 325 aaKnown RBP15.09■□□□□ 0.01
CCNF-201ENST00000293968 C2orf40Q9H1Z8 148 aa15.09■□□□□ 0.01
CCNF-201ENST00000293968 SEMA6AQ9H2E6 1030 aa15.09■□□□□ 0.01
CCNF-201ENST00000293968 MINDY3Q9H8M7 445 aa15.09■□□□□ 0.01
CCNF-201ENST00000293968 SNX15Q9NRS6 342 aa15.09■□□□□ 0.01
CCNF-201ENST00000293968 ACKR2O00590 384 aa15.08■□□□□ 0.01
CCNF-201ENST00000293968 ADCY6O43306 1168 aa15.08■□□□□ 0.01
CCNF-201ENST00000293968 PABPC4LP0CB38 370 aaKnown RBP15.08■□□□□ 0.01
CCNF-201ENST00000293968 CNTFP26441 200 aa15.08■□□□□ 0.01
CCNF-201ENST00000293968 AVPR1AP37288 418 aa15.08■□□□□ 0.01
CCNF-201ENST00000293968 HDAC4P56524 1084 aa15.08■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms