RNA–Protein interactions for RNA: ENST00000293780.4

CHRNE-201, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNE, Length 2,455 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-201ENST00000293780 ZNF638Q14966 1978 aaKnown RBP17.32■□□□□ 0.36
CHRNE-201ENST00000293780 SYNJ2BP-COX16A0A087WUM0 186 aa17.32■□□□□ 0.36
CHRNE-201ENST00000293780 ARHGAP42A6NI28 874 aa17.32■□□□□ 0.36
CHRNE-201ENST00000293780 FESP07332 822 aa17.32■□□□□ 0.36
CHRNE-201ENST00000293780 ITGA2BP08514 1039 aa17.32■□□□□ 0.36
CHRNE-201ENST00000293780 CNTFP26441 200 aa17.32■□□□□ 0.36
CHRNE-201ENST00000293780 CACNA2D1P54289 1103 aa17.32■□□□□ 0.36
CHRNE-201ENST00000293780 PITX1P78337 314 aaPredicted RBP17.32■□□□□ 0.36
CHRNE-201ENST00000293780 ZNF618Q5T7W0 954 aa17.32■□□□□ 0.36
CHRNE-201ENST00000293780 FOXB2Q5VYV0 432 aa17.32■□□□□ 0.36
CHRNE-201ENST00000293780 LRRC8BQ6P9F7 803 aa17.32■□□□□ 0.36
CHRNE-201ENST00000293780 CYS1Q717R9 158 aa17.32■□□□□ 0.36
CHRNE-201ENST00000293780 SLC26A9Q7LBE3 791 aa17.32■□□□□ 0.36
CHRNE-201ENST00000293780 AFG1LQ8WV93 481 aa17.32■□□□□ 0.36
CHRNE-201ENST00000293780 C1orf21Q9H246 121 aa17.32■□□□□ 0.36
CHRNE-201ENST00000293780 VCXQ9H320 206 aa17.32■□□□□ 0.36
CHRNE-201ENST00000293780 COX16Q9P0S2 106 aa17.32■□□□□ 0.36
CHRNE-201ENST00000293780 MORF4L1Q9UBU8 362 aa17.32■□□□□ 0.36
CHRNE-201ENST00000293780 ASB3Q9Y575 518 aa17.32■□□□□ 0.36
CHRNE-201ENST00000293780 AHCYL1O43865 530 aa17.31■□□□□ 0.36
CHRNE-201ENST00000293780 SIN3BO75182 1162 aa17.31■□□□□ 0.36
CHRNE-201ENST00000293780 GLRA3O75311 464 aa17.31■□□□□ 0.36
CHRNE-201ENST00000293780 PSMB4P28070 264 aa17.31■□□□□ 0.36
CHRNE-201ENST00000293780 GRM5P41594 1212 aa17.31■□□□□ 0.36
CHRNE-201ENST00000293780 AP2B1P63010 937 aa17.31■□□□□ 0.36
CHRNE-201ENST00000293780 PEX6Q13608 980 aa17.31■□□□□ 0.36
CHRNE-201ENST00000293780 TBCCQ15814 346 aa17.31■□□□□ 0.36
CHRNE-201ENST00000293780 KYAT1Q16773 422 aa17.31■□□□□ 0.36
CHRNE-201ENST00000293780 ZDHHC17Q8IUH5 632 aa17.31■□□□□ 0.36
CHRNE-201ENST00000293780 PPP1R13LQ8WUF5 828 aa17.31■□□□□ 0.36
CHRNE-201ENST00000293780 P2RY11Q96G91 374 aa17.31■□□□□ 0.36
CHRNE-201ENST00000293780 EIF2AQ9BY44 585 aaKnown RBP17.31■□□□□ 0.36
CHRNE-201ENST00000293780 NDE1Q9NXR1 346 aa17.31■□□□□ 0.36
CHRNE-201ENST00000293780 APOBEC2Q9Y235 224 aaKnown RBP17.31■□□□□ 0.36
CHRNE-201ENST00000293780 RNF103O00237 685 aa17.31■□□□□ 0.36
CHRNE-201ENST00000293780 FDFT1P37268 417 aa17.31■□□□□ 0.36
CHRNE-201ENST00000293780 IDH3AP50213 366 aa17.31■□□□□ 0.36
CHRNE-201ENST00000293780 GTF2A2P52657 109 aa17.31■□□□□ 0.36
CHRNE-201ENST00000293780 KIZQ2M2Z5 673 aa17.31■□□□□ 0.36
CHRNE-201ENST00000293780 ARMCX2Q7L311 632 aa17.31■□□□□ 0.36
CHRNE-201ENST00000293780 CMC1Q7Z7K0 106 aa17.31■□□□□ 0.36
CHRNE-201ENST00000293780 NT5DC4Q86YG4 428 aa17.31■□□□□ 0.36
CHRNE-201ENST00000293780 EGFL6Q8IUX8 553 aa17.31■□□□□ 0.36
CHRNE-201ENST00000293780 EFCAB3Q8N7B9 438 aa17.31■□□□□ 0.36
CHRNE-201ENST00000293780 PYDC1Q8WXC3 89 aa17.31■□□□□ 0.36
CHRNE-201ENST00000293780 TSC22D3Q99576 134 aa17.31■□□□□ 0.36
CHRNE-201ENST00000293780 PROCP04070 461 aa17.3■□□□□ 0.36
CHRNE-201ENST00000293780 RBBP5Q15291 538 aaKnown RBP17.3■□□□□ 0.36
CHRNE-201ENST00000293780 STXBP5Q5T5C0 1151 aa17.3■□□□□ 0.36
CHRNE-201ENST00000293780 ARHGAP17Q68EM7 881 aa17.3■□□□□ 0.36
CHRNE-201ENST00000293780 ACMSDQ8TDX5 336 aa17.3■□□□□ 0.36
CHRNE-201ENST00000293780 CDKL2Q92772 493 aa17.3■□□□□ 0.36
CHRNE-201ENST00000293780 IFT43Q96FT9 208 aa17.3■□□□□ 0.36
CHRNE-201ENST00000293780 ATXN7L3BQ96GX2 97 aa17.3■□□□□ 0.36
CHRNE-201ENST00000293780 OXCT2Q9BYC2 517 aaPredicted RBP17.3■□□□□ 0.36
CHRNE-201ENST00000293780 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.3■□□□□ 0.36
CHRNE-201ENST00000293780 GTF2IRD1Q9UHL9 959 aa17.3■□□□□ 0.36
CHRNE-201ENST00000293780 FZD10Q9ULW2 581 aa17.3■□□□□ 0.36
CHRNE-201ENST00000293780 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.3■□□□□ 0.36
CHRNE-201ENST00000293780 MAGEA13PA6NCF6 341 aa17.3■□□□□ 0.36
CHRNE-201ENST00000293780 PDE5AO76074 875 aa17.3■□□□□ 0.36
CHRNE-201ENST00000293780 SNUPNO95149 360 aaKnown RBP17.3■□□□□ 0.36
CHRNE-201ENST00000293780 SERPINE1P05121 402 aa17.3■□□□□ 0.36
CHRNE-201ENST00000293780 ZCCHC18P0CG32 403 aa17.3■□□□□ 0.36
CHRNE-201ENST00000293780 MLNP12872 115 aa17.3■□□□□ 0.36
CHRNE-201ENST00000293780 YBX3P16989 372 aaKnown RBP eCLIP17.3■□□□□ 0.36
CHRNE-201ENST00000293780 HOXA11P31270 313 aaPredicted RBP17.3■□□□□ 0.36
CHRNE-201ENST00000293780 BST2Q10589 180 aaKnown RBP17.3■□□□□ 0.36
CHRNE-201ENST00000293780 HIC1Q14526 733 aa17.3■□□□□ 0.36
CHRNE-201ENST00000293780 TAPT1Q6NXT6 567 aa17.3■□□□□ 0.36
CHRNE-201ENST00000293780 SLC30A9Q6PML9 568 aa17.3■□□□□ 0.36
CHRNE-201ENST00000293780 MAMDC4Q6UXC1 1216 aa17.3■□□□□ 0.36
CHRNE-201ENST00000293780 RNF111Q6ZNA4 994 aa17.3■□□□□ 0.36
CHRNE-201ENST00000293780 RAPH1Q70E73 1250 aa17.3■□□□□ 0.36
CHRNE-201ENST00000293780 DEFB106AQ8N104 65 aa17.3■□□□□ 0.36
CHRNE-201ENST00000293780 ANKRD52Q8NB46 1076 aa17.3■□□□□ 0.36
CHRNE-201ENST00000293780 CCNYQ8ND76 341 aa17.3■□□□□ 0.36
CHRNE-201ENST00000293780 PGBD4Q96DM1 585 aa17.3■□□□□ 0.36
CHRNE-201ENST00000293780 ECSITQ9BQ95 431 aa17.3■□□□□ 0.36
CHRNE-201ENST00000293780 FAM124BQ9H5Z6 455 aaPredicted RBP17.3■□□□□ 0.36
CHRNE-201ENST00000293780 DCDC2Q9UHG0 476 aa17.3■□□□□ 0.36
CHRNE-201ENST00000293780 LOC100653049A0A140TA62 436 aa17.29■□□□□ 0.36
CHRNE-201ENST00000293780 ZNF195O14628 629 aa17.29■□□□□ 0.36
CHRNE-201ENST00000293780 AP1G2O75843 785 aa17.29■□□□□ 0.36
CHRNE-201ENST00000293780 KRT34O76011 436 aa17.29■□□□□ 0.36
CHRNE-201ENST00000293780 ATP5BP06576 529 aaKnown RBP17.29■□□□□ 0.36
CHRNE-201ENST00000293780 GNAT1P11488 350 aa17.29■□□□□ 0.36
CHRNE-201ENST00000293780 PGAM1P18669 254 aa17.29■□□□□ 0.36
CHRNE-201ENST00000293780 TYK2P29597 1187 aa17.29■□□□□ 0.36
CHRNE-201ENST00000293780 ARL4AP40617 200 aa17.29■□□□□ 0.36
CHRNE-201ENST00000293780 EPHB1P54762 984 aa17.29■□□□□ 0.36
CHRNE-201ENST00000293780 ITGA9Q13797 1035 aa17.29■□□□□ 0.36
CHRNE-201ENST00000293780 MARCH8Q5T0T0 291 aa17.29■□□□□ 0.36
CHRNE-201ENST00000293780 RASSF3Q86WH2 238 aa17.29■□□□□ 0.36
CHRNE-201ENST00000293780 CCNJLQ8IV13 435 aa17.29■□□□□ 0.36
CHRNE-201ENST00000293780 TNS4Q8IZW8 715 aa17.29■□□□□ 0.36
CHRNE-201ENST00000293780 SLC2A14Q8TDB8 520 aa17.29■□□□□ 0.36
CHRNE-201ENST00000293780 KBTBD7Q8WVZ9 684 aa17.29■□□□□ 0.36
CHRNE-201ENST00000293780 ATP2A3Q93084 1043 aa17.29■□□□□ 0.36
CHRNE-201ENST00000293780 AZIN2Q96A70 460 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms