RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 WDR41Q9HAD4 459 aa15.67■□□□□ 0.1
SHROOM4-201ENST00000289292 VTA1Q9NP79 307 aa15.67■□□□□ 0.1
SHROOM4-201ENST00000289292 RASSF9O75901 435 aa15.67■□□□□ 0.1
SHROOM4-201ENST00000289292 ZNF470Q6ECI4 717 aa15.67■□□□□ 0.1
SHROOM4-201ENST00000289292 TRIM69Q86WT6 500 aa15.67■□□□□ 0.1
SHROOM4-201ENST00000289292 FAM120BQ96EK7 910 aaKnown RBP15.67■□□□□ 0.1
SHROOM4-201ENST00000289292 E5RJQ4 531 aa15.67■□□□□ 0.1
SHROOM4-201ENST00000289292 CD151P48509 253 aa15.67■□□□□ 0.1
SHROOM4-201ENST00000289292 SNX17Q15036 470 aa15.67■□□□□ 0.1
SHROOM4-201ENST00000289292 ARMCX4Q5H9R4 360 aa15.67■□□□□ 0.1
SHROOM4-201ENST00000289292 TIGD7Q6NT04 549 aaPredicted RBP15.67■□□□□ 0.1
SHROOM4-201ENST00000289292 ZCCHC7Q8N3Z6 543 aaKnown RBP15.67■□□□□ 0.1
SHROOM4-201ENST00000289292 CARNMT1Q8N4J0 409 aa15.67■□□□□ 0.1
SHROOM4-201ENST00000289292 ALLCQ8N6M5 410 aa15.67■□□□□ 0.1
SHROOM4-201ENST00000289292 VPS37AQ8NEZ2 397 aa15.67■□□□□ 0.1
SHROOM4-201ENST00000289292 ZDHHC15Q96MV8 337 aa15.67■□□□□ 0.1
SHROOM4-201ENST00000289292 LIMD1Q9UGP4 676 aa15.67■□□□□ 0.1
SHROOM4-201ENST00000289292 CNTNAP2Q9UHC6 1331 aa15.67■□□□□ 0.1
SHROOM4-201ENST00000289292 EPB42P16452 691 aa15.66■□□□□ 0.1
SHROOM4-201ENST00000289292 CCNG1P51959 295 aa15.66■□□□□ 0.1
SHROOM4-201ENST00000289292 CDC42EP1Q00587 391 aa15.66■□□□□ 0.1
SHROOM4-201ENST00000289292 TLK2Q86UE8 772 aa15.66■□□□□ 0.1
SHROOM4-201ENST00000289292 SPATA6LQ8N4H0 392 aa15.66■□□□□ 0.1
SHROOM4-201ENST00000289292 NMRAL1Q9HBL8 299 aa15.66■□□□□ 0.1
SHROOM4-201ENST00000289292 RBM22Q9NW64 420 aaKnown RBP eCLIP15.66■□□□□ 0.1
SHROOM4-201ENST00000289292 LSM7Q9UK45 103 aaKnown RBP15.66■□□□□ 0.1
SHROOM4-201ENST00000289292 ALOX12P18054 663 aa15.66■□□□□ 0.1
SHROOM4-201ENST00000289292 DCP1BQ8IZD4 617 aaKnown RBP15.66■□□□□ 0.1
SHROOM4-201ENST00000289292 CAPSLQ8WWF8 208 aa15.66■□□□□ 0.1
SHROOM4-201ENST00000289292 TBCDQ9BTW9 1192 aa15.66■□□□□ 0.1
SHROOM4-201ENST00000289292 FGFBP2Q9BYJ0 223 aa15.66■□□□□ 0.1
SHROOM4-201ENST00000289292 FHDC1Q9C0D6 1143 aaPredicted RBP15.66■□□□□ 0.1
SHROOM4-201ENST00000289292 SELENONQ9NZV5 590 aa15.66■□□□□ 0.1
SHROOM4-201ENST00000289292 PCDHA11Q9Y5I1 949 aa15.66■□□□□ 0.1
SHROOM4-201ENST00000289292 COPG1Q9Y678 874 aaKnown RBP15.66■□□□□ 0.1
SHROOM4-201ENST00000289292 RIMS1Q86UR5 1692 aaKnown RBP15.66■□□□□ 0.1
SHROOM4-201ENST00000289292 LACTBL1A8MY62 500 aa15.66■□□□□ 0.1
SHROOM4-201ENST00000289292 TRIM24O15164 1050 aa15.66■□□□□ 0.1
SHROOM4-201ENST00000289292 LRPAP1P30533 357 aa15.66■□□□□ 0.1
SHROOM4-201ENST00000289292 PBX1P40424 430 aa15.66■□□□□ 0.1
SHROOM4-201ENST00000289292 FAM98BQ52LJ0 330 aaKnown RBP15.66■□□□□ 0.1
SHROOM4-201ENST00000289292 TDRD10Q5VZ19 366 aaKnown RBP15.66■□□□□ 0.1
SHROOM4-201ENST00000289292 FAM228AQ86W67 206 aa15.66■□□□□ 0.1
SHROOM4-201ENST00000289292 RAB42Q8N4Z0 105 aa15.66■□□□□ 0.1
SHROOM4-201ENST00000289292 RBM46Q8TBY0 533 aaKnown RBP15.66■□□□□ 0.1
SHROOM4-201ENST00000289292 MMADHCQ9H3L0 296 aaPredicted RBP15.66■□□□□ 0.1
SHROOM4-201ENST00000289292 CDHR5Q9HBB8 845 aa15.66■□□□□ 0.1
SHROOM4-201ENST00000289292 TMX2Q9Y320 296 aa15.66■□□□□ 0.1
SHROOM4-201ENST00000289292 TSPAN8P19075 237 aa15.66■□□□□ 0.1
SHROOM4-201ENST00000289292 MAGED4Q96JG8 741 aa15.66■□□□□ 0.1
SHROOM4-201ENST00000289292 SLC17A7Q9P2U7 560 aa15.66■□□□□ 0.1
SHROOM4-201ENST00000289292 GLRA2P23416 452 aa15.66■□□□□ 0.1
SHROOM4-201ENST00000289292 ZIK1Q3SY52 487 aaPredicted RBP15.66■□□□□ 0.1
SHROOM4-201ENST00000289292 MYO1HQ8N1T3 1032 aa15.66■□□□□ 0.1
SHROOM4-201ENST00000289292 DNAJC19Q96DA6 116 aa15.66■□□□□ 0.1
SHROOM4-201ENST00000289292 BARX2Q9UMQ3 279 aaPredicted RBP15.66■□□□□ 0.1
SHROOM4-201ENST00000289292 SH3BP1Q9Y3L3 701 aa15.66■□□□□ 0.1
SHROOM4-201ENST00000289292 CNTNAP4Q9C0A0 1308 aa15.66■□□□□ 0.1
SHROOM4-201ENST00000289292 FCGR1AP12314 374 aa15.65■□□□□ 0.1
SHROOM4-201ENST00000289292 PSMB4P28070 264 aa15.65■□□□□ 0.1
SHROOM4-201ENST00000289292 RFX3P48380 749 aa15.65■□□□□ 0.1
SHROOM4-201ENST00000289292 OLFML1Q6UWY5 402 aa15.65■□□□□ 0.1
SHROOM4-201ENST00000289292 TTC7BQ86TV6 843 aa15.65■□□□□ 0.1
SHROOM4-201ENST00000289292 SLC22A9Q8IVM8 553 aa15.65■□□□□ 0.1
SHROOM4-201ENST00000289292 ARL10Q8N8L6 244 aa15.65■□□□□ 0.1
SHROOM4-201ENST00000289292 TRPC4APQ8TEL6 797 aa15.65■□□□□ 0.1
SHROOM4-201ENST00000289292 NSMCE2Q96MF7 247 aa15.65■□□□□ 0.1
SHROOM4-201ENST00000289292 KATNAL1Q9BW62 490 aa15.65■□□□□ 0.1
SHROOM4-201ENST00000289292 PDGFCQ9NRA1 345 aa15.65■□□□□ 0.1
SHROOM4-201ENST00000289292 CRYL1Q9Y2S2 319 aa15.65■□□□□ 0.1
SHROOM4-201ENST00000289292 B3GAT3O94766 335 aa15.65■□□□□ 0.1
SHROOM4-201ENST00000289292 DDHD2O94830 711 aa15.65■□□□□ 0.1
SHROOM4-201ENST00000289292 TPBGLP0DKB5 382 aa15.65■□□□□ 0.1
SHROOM4-201ENST00000289292 GCNT1Q02742 428 aa15.65■□□□□ 0.1
SHROOM4-201ENST00000289292 DCTN2Q13561 401 aaKnown RBP15.65■□□□□ 0.1
SHROOM4-201ENST00000289292 GRIK5Q16478 980 aa15.65■□□□□ 0.1
SHROOM4-201ENST00000289292 TBL1YQ9BQ87 522 aa15.65■□□□□ 0.1
SHROOM4-201ENST00000289292 NAT9Q9BTE0 207 aa15.65■□□□□ 0.1
SHROOM4-201ENST00000289292 VTI1BQ9UEU0 232 aa15.65■□□□□ 0.1
SHROOM4-201ENST00000289292 MYOM1P52179 1685 aa15.65■□□□□ 0.1
SHROOM4-201ENST00000289292 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.65■□□□□ 0.1
SHROOM4-201ENST00000289292 TULP2O00295 520 aa15.65■□□□□ 0.1
SHROOM4-201ENST00000289292 SLURP2P0DP57 97 aa15.65■□□□□ 0.1
SHROOM4-201ENST00000289292 MSX2P35548 267 aaPredicted RBP15.65■□□□□ 0.1
SHROOM4-201ENST00000289292 CCNHP51946 323 aaPredicted RBP15.65■□□□□ 0.1
SHROOM4-201ENST00000289292 WASHC5Q12768 1159 aa15.65■□□□□ 0.1
SHROOM4-201ENST00000289292 ZNF177Q13360 481 aaPredicted RBP15.65■□□□□ 0.1
SHROOM4-201ENST00000289292 CDH18Q13634 790 aa15.65■□□□□ 0.1
SHROOM4-201ENST00000289292 LLGL2Q6P1M3 1020 aa15.65■□□□□ 0.1
SHROOM4-201ENST00000289292 PDCD2LQ9BRP1 358 aa15.65■□□□□ 0.1
SHROOM4-201ENST00000289292 C12orf65Q9H3J6 166 aaKnown RBP15.65■□□□□ 0.1
SHROOM4-201ENST00000289292 NRDE2Q9H7Z3 1164 aa15.65■□□□□ 0.1
SHROOM4-201ENST00000289292 ACSS2Q9NR19 701 aa15.65■□□□□ 0.1
SHROOM4-201ENST00000289292 ARL8BQ9NVJ2 186 aa15.65■□□□□ 0.1
SHROOM4-201ENST00000289292 NMRK1Q9NWW6 199 aa15.65■□□□□ 0.1
SHROOM4-201ENST00000289292 F5H5T6 163 aa15.65■□□□□ 0.1
SHROOM4-201ENST00000289292 MAPTP10636 758 aaKnown RBP15.65■□□□□ 0.1
SHROOM4-201ENST00000289292 COX4I1P13073 169 aa15.65■□□□□ 0.1
SHROOM4-201ENST00000289292 PRKCIP41743 596 aa15.65■□□□□ 0.1
SHROOM4-201ENST00000289292 TAS2R40P59535 323 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms