RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 PRKCHP24723 683 aa19.84■□□□□ 0.77
BRAF-201ENST00000288602 SH2D5Q6ZV89 423 aa19.84■□□□□ 0.77
BRAF-201ENST00000288602 ZNF598Q86UK7 904 aaKnown RBP19.84■□□□□ 0.77
BRAF-201ENST00000288602 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.84■□□□□ 0.77
BRAF-201ENST00000288602 ZNF75CPQ92670 426 aaPredicted RBP19.84■□□□□ 0.77
BRAF-201ENST00000288602 NTAN1Q96AB6 310 aa19.84■□□□□ 0.77
BRAF-201ENST00000288602 FAM111AQ96PZ2 611 aa19.84■□□□□ 0.77
BRAF-201ENST00000288602 ACTR5Q9H9F9 607 aaPredicted RBP19.84■□□□□ 0.77
BRAF-201ENST00000288602 DMAP1Q9NPF5 467 aaPredicted RBP19.84■□□□□ 0.77
BRAF-201ENST00000288602 USP12O75317 370 aa19.84■□□□□ 0.77
BRAF-201ENST00000288602 SRGAP2BP0DMP2 458 aa19.84■□□□□ 0.77
BRAF-201ENST00000288602 MGAT1P26572 445 aa19.84■□□□□ 0.77
BRAF-201ENST00000288602 ARL13BQ3SXY8 428 aa19.84■□□□□ 0.77
BRAF-201ENST00000288602 FITM2Q8N6M3 262 aa19.84■□□□□ 0.77
BRAF-201ENST00000288602 GSDMBQ8TAX9 411 aa19.84■□□□□ 0.77
BRAF-201ENST00000288602 CD99L2Q8TCZ2 262 aa19.84■□□□□ 0.77
BRAF-201ENST00000288602 SSU72Q9NP77 194 aaKnown RBP19.84■□□□□ 0.77
BRAF-201ENST00000288602 HAUS2Q9NVX0 235 aa19.84■□□□□ 0.77
BRAF-201ENST00000288602 SHROOM3Q8TF72 1996 aa19.83■□□□□ 0.77
BRAF-201ENST00000288602 STK10O94804 968 aaKnown RBP19.83■□□□□ 0.77
BRAF-201ENST00000288602 RPLP2P05387 115 aaKnown RBP19.83■□□□□ 0.77
BRAF-201ENST00000288602 EPHB2P29323 1055 aa19.83■□□□□ 0.77
BRAF-201ENST00000288602 SCAPQ12770 1279 aa19.83■□□□□ 0.77
BRAF-201ENST00000288602 TTC39BQ5VTQ0 682 aaPredicted RBP19.83■□□□□ 0.77
BRAF-201ENST00000288602 PM20D1Q6GTS8 502 aa19.83■□□□□ 0.77
BRAF-201ENST00000288602 CDHR3Q6ZTQ4 885 aa19.83■□□□□ 0.77
BRAF-201ENST00000288602 ZNF276Q8N554 614 aa19.83■□□□□ 0.77
BRAF-201ENST00000288602 PTPRN2Q92932 1015 aa19.83■□□□□ 0.77
BRAF-201ENST00000288602 LRRC39Q96DD0 335 aa19.83■□□□□ 0.77
BRAF-201ENST00000288602 CELF6Q96J87 481 aaKnown RBP19.83■□□□□ 0.77
BRAF-201ENST00000288602 SIK2Q9H0K1 926 aa19.83■□□□□ 0.77
BRAF-201ENST00000288602 XAB2Q9HCS7 855 aaKnown RBP19.83■□□□□ 0.77
BRAF-201ENST00000288602 KLHL8Q9P2G9 620 aaPredicted RBP19.83■□□□□ 0.77
BRAF-201ENST00000288602 PCDHA11Q9Y5I1 949 aa19.83■□□□□ 0.77
BRAF-201ENST00000288602 THSD7BQ9C0I4 1608 aa19.83■□□□□ 0.76
BRAF-201ENST00000288602 CAPN15O75808 1086 aa19.83■□□□□ 0.76
BRAF-201ENST00000288602 LRIG2O94898 1065 aa19.83■□□□□ 0.76
BRAF-201ENST00000288602 FDFT1P37268 417 aa19.83■□□□□ 0.76
BRAF-201ENST00000288602 GRIK1P39086 918 aa19.83■□□□□ 0.76
BRAF-201ENST00000288602 SDHAF4Q5VUM1 108 aa19.83■□□□□ 0.76
BRAF-201ENST00000288602 DCLRE1AQ6PJP8 1040 aa19.83■□□□□ 0.76
BRAF-201ENST00000288602 CES3Q6UWW8 571 aa19.83■□□□□ 0.76
BRAF-201ENST00000288602 DQX1Q8TE96 717 aaKnown RBP19.83■□□□□ 0.76
BRAF-201ENST00000288602 STAMBPL1Q96FJ0 436 aa19.83■□□□□ 0.76
BRAF-201ENST00000288602 PGAP3Q96FM1 320 aaPredicted RBP19.83■□□□□ 0.76
BRAF-201ENST00000288602 SFMBT1Q9UHJ3 866 aa19.83■□□□□ 0.76
BRAF-201ENST00000288602 MAGED2Q9UNF1 606 aaPredicted RBP19.83■□□□□ 0.76
BRAF-201ENST00000288602 TRDMT1O14717 391 aaKnown RBP19.82■□□□□ 0.76
BRAF-201ENST00000288602 OPHN1O60890 802 aa19.82■□□□□ 0.76
BRAF-201ENST00000288602 CXCR3P49682 368 aa19.82■□□□□ 0.76
BRAF-201ENST00000288602 YWHAHQ04917 246 aaPredicted RBP19.82■□□□□ 0.76
BRAF-201ENST00000288602 CBLBQ13191 982 aa19.82■□□□□ 0.76
BRAF-201ENST00000288602 FAM26DQ5JW98 314 aa19.82■□□□□ 0.76
BRAF-201ENST00000288602 CLLU1OSQ5K130 101 aa19.82■□□□□ 0.76
BRAF-201ENST00000288602 MROH9Q5TGP6 573 aa19.82■□□□□ 0.76
BRAF-201ENST00000288602 THEM5Q8N1Q8 247 aa19.82■□□□□ 0.76
BRAF-201ENST00000288602 LINC01599Q8WXQ3 324 aa19.82■□□□□ 0.76
BRAF-201ENST00000288602 TTC17Q96AE7 1141 aa19.82■□□□□ 0.76
BRAF-201ENST00000288602 OXNAD1Q96HP4 312 aaPredicted RBP19.82■□□□□ 0.76
BRAF-201ENST00000288602 SUSD3Q96L08 255 aa19.82■□□□□ 0.76
BRAF-201ENST00000288602 SLC13A1Q9BZW2 595 aa19.82■□□□□ 0.76
BRAF-201ENST00000288602 KLHL14Q9P2G3 628 aa19.82■□□□□ 0.76
BRAF-201ENST00000288602 PRG3Q9Y2Y8 225 aaPredicted RBP19.82■□□□□ 0.76
BRAF-201ENST00000288602 MSI1O43347 362 aaKnown RBP19.82■□□□□ 0.76
BRAF-201ENST00000288602 EDF1O60869 148 aaKnown RBP19.82■□□□□ 0.76
BRAF-201ENST00000288602 TRPA1O75762 1119 aa19.82■□□□□ 0.76
BRAF-201ENST00000288602 PTPN3P26045 913 aa19.82■□□□□ 0.76
BRAF-201ENST00000288602 SARNPP82979 210 aaKnown RBP19.82■□□□□ 0.76
BRAF-201ENST00000288602 SPATA2LQ8IUW3 424 aaPredicted RBP19.82■□□□□ 0.76
BRAF-201ENST00000288602 GLT1D1Q96MS3 346 aa19.82■□□□□ 0.76
BRAF-201ENST00000288602 GORASP1Q9BQQ3 440 aa19.82■□□□□ 0.76
BRAF-201ENST00000288602 DNAJB4Q9UDY4 337 aa19.82■□□□□ 0.76
BRAF-201ENST00000288602 SLC12A4Q9UP95 1085 aa19.82■□□□□ 0.76
BRAF-201ENST00000288602 TM9SF1O15321 606 aa19.81■□□□□ 0.76
BRAF-201ENST00000288602 SLC5A3P53794 718 aa19.81■□□□□ 0.76
BRAF-201ENST00000288602 TSPY1Q01534 308 aa19.81■□□□□ 0.76
BRAF-201ENST00000288602 OVGP1Q12889 678 aa19.81■□□□□ 0.76
BRAF-201ENST00000288602 SLC39A12Q504Y0 691 aa19.81■□□□□ 0.76
BRAF-201ENST00000288602 RWDD4Q6NW29 188 aaKnown RBP19.81■□□□□ 0.76
BRAF-201ENST00000288602 OTOAQ7RTW8 1153 aa19.81■□□□□ 0.76
BRAF-201ENST00000288602 SCN4BQ8IWT1 228 aa19.81■□□□□ 0.76
BRAF-201ENST00000288602 ARNTL2Q8WYA1 636 aa19.81■□□□□ 0.76
BRAF-201ENST00000288602 APOPT1Q96IL0 206 aa19.81■□□□□ 0.76
BRAF-201ENST00000288602 RGS18Q9NS28 235 aa19.81■□□□□ 0.76
BRAF-201ENST00000288602 SYBUQ9NX95 663 aa19.81■□□□□ 0.76
BRAF-201ENST00000288602 SRRDQ9UH36 339 aa19.81■□□□□ 0.76
BRAF-201ENST00000288602 DSEQ9UL01 958 aa19.81■□□□□ 0.76
BRAF-201ENST00000288602 SF3B1O75533 1304 aaKnown RBP eCLIP19.81■□□□□ 0.764e-6■■■■■ 61.1
BRAF-201ENST00000288602 CASP8AP2Q9UKL3 1982 aa19.81■□□□□ 0.76
BRAF-201ENST00000288602 HMX2A2RU54 273 aa19.81■□□□□ 0.76
BRAF-201ENST00000288602 KRT37O76014 449 aa19.81■□□□□ 0.76
BRAF-201ENST00000288602 TOP3BO95985 862 aaKnown RBP19.81■□□□□ 0.76
BRAF-201ENST00000288602 F9P00740 461 aa19.81■□□□□ 0.76
BRAF-201ENST00000288602 SNRPAP09012 282 aaKnown RBP19.81■□□□□ 0.76
BRAF-201ENST00000288602 OR1G1P47890 313 aa19.81■□□□□ 0.76
BRAF-201ENST00000288602 NEK3P51956 506 aa19.81■□□□□ 0.76
BRAF-201ENST00000288602 AIF1P55008 147 aa19.81■□□□□ 0.76
BRAF-201ENST00000288602 SLC18A2Q05940 514 aa19.81■□□□□ 0.76
BRAF-201ENST00000288602 PARP6Q2NL67 630 aa19.81■□□□□ 0.76
BRAF-201ENST00000288602 LRRC8BQ6P9F7 803 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms