RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 COL16A1Q07092 1604 aaPredicted RBP13.75□□□□□ -0.21
SCAF4-201ENST00000286835 SLC15A5A6NIM6 579 aa13.75□□□□□ -0.21
SCAF4-201ENST00000286835 MXD4Q14582 209 aaPredicted RBP13.75□□□□□ -0.21
SCAF4-201ENST00000286835 USP10Q14694 798 aaKnown RBP13.75□□□□□ -0.21
SCAF4-201ENST00000286835 BNC2Q6ZN30 1099 aaPredicted RBP13.75□□□□□ -0.21
SCAF4-201ENST00000286835 FAM43BQ6ZT52 329 aaPredicted RBP13.75□□□□□ -0.21
SCAF4-201ENST00000286835 PHTF2Q8N3S3 785 aa13.75□□□□□ -0.21
SCAF4-201ENST00000286835 FAM156AQ8NDB6 213 aa13.75□□□□□ -0.21
SCAF4-201ENST00000286835 FAM81AQ8TBF8 368 aa13.75□□□□□ -0.21
SCAF4-201ENST00000286835 PEBP4Q96S96 227 aa13.75□□□□□ -0.21
SCAF4-201ENST00000286835 WDR83Q9BRX9 315 aaKnown RBP13.75□□□□□ -0.21
SCAF4-201ENST00000286835 FRMD8Q9BZ67 464 aaPredicted RBP13.75□□□□□ -0.21
SCAF4-201ENST00000286835 AURKCQ9UQB9 309 aa13.75□□□□□ -0.21
SCAF4-201ENST00000286835 SLC25A27O95847 323 aa13.75□□□□□ -0.21
SCAF4-201ENST00000286835 ETV4P43268 484 aa13.75□□□□□ -0.21
SCAF4-201ENST00000286835 ABCE1P61221 599 aaKnown RBP13.75□□□□□ -0.21
SCAF4-201ENST00000286835 SP2Q02086 613 aa13.75□□□□□ -0.21
SCAF4-201ENST00000286835 PRPSAP1Q14558 356 aa13.75□□□□□ -0.21
SCAF4-201ENST00000286835 IER5Q5VY09 327 aa13.75□□□□□ -0.21
SCAF4-201ENST00000286835 ZBTB46Q86UZ6 589 aa13.75□□□□□ -0.21
SCAF4-201ENST00000286835 NAT14Q8WUY8 206 aa13.75□□□□□ -0.21
SCAF4-201ENST00000286835 JADE3Q92613 823 aa13.75□□□□□ -0.21
SCAF4-201ENST00000286835 UBE2OQ9C0C9 1292 aaKnown RBP13.75□□□□□ -0.21
SCAF4-201ENST00000286835 ELOVL4Q9GZR5 314 aa13.75□□□□□ -0.21
SCAF4-201ENST00000286835 ILKAPQ9H0C8 392 aaPredicted RBP13.75□□□□□ -0.21
SCAF4-201ENST00000286835 TMEM216Q9P0N5 145 aa13.75□□□□□ -0.21
SCAF4-201ENST00000286835 LZTS1Q9Y250 596 aa13.75□□□□□ -0.21
SCAF4-201ENST00000286835 SNX13Q9Y5W8 968 aa13.75□□□□□ -0.21
SCAF4-201ENST00000286835 ARFGEF1Q9Y6D6 1849 aa13.74□□□□□ -0.21
SCAF4-201ENST00000286835 VDRP11473 427 aa13.74□□□□□ -0.21
SCAF4-201ENST00000286835 SPRP35270 261 aaPredicted RBP13.74□□□□□ -0.21
SCAF4-201ENST00000286835 CASP2P42575 452 aa13.74□□□□□ -0.21
SCAF4-201ENST00000286835 RAP1GDS1P52306 607 aa13.74□□□□□ -0.21
SCAF4-201ENST00000286835 PDK2Q15119 407 aa13.74□□□□□ -0.21
SCAF4-201ENST00000286835 LRRC8EQ6NSJ5 796 aa13.74□□□□□ -0.21
SCAF4-201ENST00000286835 CYP2R1Q6VVX0 501 aa13.74□□□□□ -0.21
SCAF4-201ENST00000286835 KYAT3Q6YP21 454 aaKnown RBP13.74□□□□□ -0.21
SCAF4-201ENST00000286835 RYBPQ8N488 228 aaPredicted RBP13.74□□□□□ -0.21
SCAF4-201ENST00000286835 BHLHE22Q8NFJ8 381 aaPredicted RBP13.74□□□□□ -0.21
SCAF4-201ENST00000286835 FAM136AQ96C01 138 aa13.74□□□□□ -0.21
SCAF4-201ENST00000286835 C20orf27Q9GZN8 174 aa13.74□□□□□ -0.21
SCAF4-201ENST00000286835 C2orf40Q9H1Z8 148 aa13.74□□□□□ -0.21
SCAF4-201ENST00000286835 COG4Q9H9E3 785 aa13.74□□□□□ -0.21
SCAF4-201ENST00000286835 POPDC2Q9HBU9 364 aa13.74□□□□□ -0.21
SCAF4-201ENST00000286835 GALNT8Q9NY28 637 aa13.74□□□□□ -0.21
SCAF4-201ENST00000286835 ITGA2BP08514 1039 aa13.74□□□□□ -0.21
SCAF4-201ENST00000286835 TGM2P21980 687 aa13.74□□□□□ -0.21
SCAF4-201ENST00000286835 USP46P62068 366 aa13.74□□□□□ -0.21
SCAF4-201ENST00000286835 MRPS5P82675 430 aaKnown RBP13.74□□□□□ -0.21
SCAF4-201ENST00000286835 XRRA1Q6P2D8 792 aa13.74□□□□□ -0.21
SCAF4-201ENST00000286835 ARFGAP1Q8N6T3 406 aa13.74□□□□□ -0.21
SCAF4-201ENST00000286835 PCDH20Q8N6Y1 951 aaKnown RBP13.74□□□□□ -0.21
SCAF4-201ENST00000286835 PARK7Q99497 189 aaKnown RBP13.74□□□□□ -0.21
SCAF4-201ENST00000286835 PCDH18Q9HCL0 1135 aa13.74□□□□□ -0.21
SCAF4-201ENST00000286835 SYNPO2Q9UMS6 1093 aa13.74□□□□□ -0.21
SCAF4-201ENST00000286835 A0A096LPK6 155 aa13.74□□□□□ -0.21
SCAF4-201ENST00000286835 RFPL1O75677 317 aa13.74□□□□□ -0.21
SCAF4-201ENST00000286835 GRK2P25098 689 aa13.74□□□□□ -0.21
SCAF4-201ENST00000286835 CRHR1P34998 444 aa13.74□□□□□ -0.21
SCAF4-201ENST00000286835 C6orf52Q5T4I8 152 aa13.74□□□□□ -0.21
SCAF4-201ENST00000286835 FRMD7Q6ZUT3 714 aa13.74□□□□□ -0.21
SCAF4-201ENST00000286835 SPATA6LQ8N4H0 392 aa13.74□□□□□ -0.21
SCAF4-201ENST00000286835 DIS3LQ8TF46 1054 aaKnown RBP13.74□□□□□ -0.21
SCAF4-201ENST00000286835 GATA6Q92908 595 aa13.74□□□□□ -0.21
SCAF4-201ENST00000286835 LENG8Q96PV6 779 aaPredicted RBP13.74□□□□□ -0.21
SCAF4-201ENST00000286835 ACO2Q99798 780 aaKnown RBP13.74□□□□□ -0.21
SCAF4-201ENST00000286835 MAGEB5Q9BZ81 275 aa13.74□□□□□ -0.21
SCAF4-201ENST00000286835 SNX25Q9H3E2 840 aa13.74□□□□□ -0.21
SCAF4-201ENST00000286835 LRRC4Q9HBW1 653 aa13.74□□□□□ -0.21
SCAF4-201ENST00000286835 ADAMTS6Q9UKP5 1117 aa13.74□□□□□ -0.21
SCAF4-201ENST00000286835 COMMD3-BMI1R4GMX3 469 aa13.74□□□□□ -0.21
SCAF4-201ENST00000286835 PHGDHO43175 533 aaKnown RBP13.73□□□□□ -0.21
SCAF4-201ENST00000286835 PSMB4P28070 264 aa13.73□□□□□ -0.21
SCAF4-201ENST00000286835 NUMBP49757 651 aa13.73□□□□□ -0.21
SCAF4-201ENST00000286835 SULT1E1P49888 294 aa13.73□□□□□ -0.21
SCAF4-201ENST00000286835 CYLC2Q14093 348 aaPredicted RBP13.73□□□□□ -0.21
SCAF4-201ENST00000286835 C16orf89Q6UX73 402 aa13.73□□□□□ -0.21
SCAF4-201ENST00000286835 PACS1Q6VY07 963 aa13.73□□□□□ -0.21
SCAF4-201ENST00000286835 ZPBP2Q6X784 338 aa13.73□□□□□ -0.21
SCAF4-201ENST00000286835 KYQ8NBH2 561 aa13.73□□□□□ -0.21
SCAF4-201ENST00000286835 OR6J1Q8NGC5 347 aa13.73□□□□□ -0.21
SCAF4-201ENST00000286835 PCDH19Q8TAB3 1148 aa13.73□□□□□ -0.21
SCAF4-201ENST00000286835 HTR3CQ8WXA8 447 aa13.73□□□□□ -0.21
SCAF4-201ENST00000286835 AMHP03971 560 aa13.73□□□□□ -0.21
SCAF4-201ENST00000286835 UBA1P22314 1058 aaKnown RBP13.73□□□□□ -0.21
SCAF4-201ENST00000286835 OLIG2Q13516 323 aa13.73□□□□□ -0.21
SCAF4-201ENST00000286835 KCNJ11Q14654 390 aa13.73□□□□□ -0.21
SCAF4-201ENST00000286835 RPS6KA2Q15349 733 aa13.73□□□□□ -0.21
SCAF4-201ENST00000286835 DLG2Q15700 870 aa13.73□□□□□ -0.21
SCAF4-201ENST00000286835 KLRG1Q96E93 195 aa13.73□□□□□ -0.21
SCAF4-201ENST00000286835 CYP4F12Q9HCS2 524 aa13.73□□□□□ -0.21
SCAF4-201ENST00000286835 IARS2Q9NSE4 1012 aaKnown RBP13.73□□□□□ -0.21
SCAF4-201ENST00000286835 FETUBQ9UGM5 382 aa13.73□□□□□ -0.21
SCAF4-201ENST00000286835 EFR3BQ9Y2G0 817 aa13.73□□□□□ -0.21
SCAF4-201ENST00000286835 AP4B1Q9Y6B7 739 aa13.73□□□□□ -0.21
SCAF4-201ENST00000286835 RNF103O00237 685 aa13.73□□□□□ -0.21
SCAF4-201ENST00000286835 VTNP04004 478 aa13.73□□□□□ -0.21
SCAF4-201ENST00000286835 EDN1P05305 212 aa13.73□□□□□ -0.21
SCAF4-201ENST00000286835 THRAP10827 490 aa13.73□□□□□ -0.21
SCAF4-201ENST00000286835 SCNN1BP51168 640 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms