RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 CRABP2P29373 138 aa8.91□□□□□ -0.98
NIPBL-201ENST00000282516 MAPK9P45984 424 aa8.91□□□□□ -0.98
NIPBL-201ENST00000282516 NR1D2Q14995 579 aa8.91□□□□□ -0.98
NIPBL-201ENST00000282516 VPS72Q15906 364 aa8.91□□□□□ -0.98
NIPBL-201ENST00000282516 MSANTD1Q6ZTZ1 278 aa8.91□□□□□ -0.98
NIPBL-201ENST00000282516 CCDC80Q76M96 950 aa8.91□□□□□ -0.98
NIPBL-201ENST00000282516 AHCYL2Q96HN2 611 aaKnown RBP8.91□□□□□ -0.98
NIPBL-201ENST00000282516 COX4I2Q96KJ9 171 aa8.91□□□□□ -0.98
NIPBL-201ENST00000282516 FAM210AQ96ND0 272 aa8.91□□□□□ -0.98
NIPBL-201ENST00000282516 BTBD9Q96Q07 612 aa8.91□□□□□ -0.98
NIPBL-201ENST00000282516 MCM8Q9UJA3 840 aa8.91□□□□□ -0.98
NIPBL-201ENST00000282516 NDUFAF1Q9Y375 327 aa8.91□□□□□ -0.98
NIPBL-201ENST00000282516 N6AMT1Q9Y5N5 214 aa8.91□□□□□ -0.98
NIPBL-201ENST00000282516 NPTXRO95502 500 aa8.91□□□□□ -0.98
NIPBL-201ENST00000282516 LSM8O95777 96 aaKnown RBP8.91□□□□□ -0.98
NIPBL-201ENST00000282516 NEK3P51956 506 aa8.91□□□□□ -0.98
NIPBL-201ENST00000282516 BCAT1P54687 386 aa8.91□□□□□ -0.98
NIPBL-201ENST00000282516 NECTIN1Q15223 517 aa8.91□□□□□ -0.98
NIPBL-201ENST00000282516 B3GNT6Q6ZMB0 384 aa8.91□□□□□ -0.98
NIPBL-201ENST00000282516 MB21D2Q8IYB1 491 aaPredicted RBP8.91□□□□□ -0.98
NIPBL-201ENST00000282516 CDH9Q9ULB4 789 aa8.91□□□□□ -0.98
NIPBL-201ENST00000282516 ERI2A8K979 691 aaKnown RBP8.91□□□□□ -0.98
NIPBL-201ENST00000282516 AP1G2O75843 785 aa8.91□□□□□ -0.98
NIPBL-201ENST00000282516 SERPINE1P05121 402 aa8.91□□□□□ -0.98
NIPBL-201ENST00000282516 CKBP12277 381 aa8.91□□□□□ -0.98
NIPBL-201ENST00000282516 MGAT5Q09328 741 aa8.91□□□□□ -0.98
NIPBL-201ENST00000282516 CUL2Q13617 745 aa8.91□□□□□ -0.98
NIPBL-201ENST00000282516 BICRALQ6AI39 1079 aa8.91□□□□□ -0.98
NIPBL-201ENST00000282516 LDHDQ86WU2 507 aa8.91□□□□□ -0.98
NIPBL-201ENST00000282516 DGCR14Q96DF8 476 aaKnown RBP8.91□□□□□ -0.98
NIPBL-201ENST00000282516 RNF145Q96MT1 663 aa8.91□□□□□ -0.98
NIPBL-201ENST00000282516 SLC25A23Q9BV35 468 aa8.91□□□□□ -0.98
NIPBL-201ENST00000282516 FICDQ9BVA6 458 aa8.91□□□□□ -0.98
NIPBL-201ENST00000282516 SASH1O94885 1247 aa8.91□□□□□ -0.98
NIPBL-201ENST00000282516 LARGE1O95461 756 aa8.91□□□□□ -0.98
NIPBL-201ENST00000282516 MMP10P09238 476 aa8.91□□□□□ -0.98
NIPBL-201ENST00000282516 CHN2P52757 468 aa8.91□□□□□ -0.98
NIPBL-201ENST00000282516 PRR5LQ6MZQ0 368 aa8.91□□□□□ -0.98
NIPBL-201ENST00000282516 BHLHB9Q6PI77 547 aa8.91□□□□□ -0.98
NIPBL-201ENST00000282516 SLFN11Q7Z7L1 901 aa8.91□□□□□ -0.98
NIPBL-201ENST00000282516 METTL16Q86W50 562 aaKnown RBP8.91□□□□□ -0.98
NIPBL-201ENST00000282516 CD302Q8IX05 232 aa8.91□□□□□ -0.98
NIPBL-201ENST00000282516 DAW1Q8N136 415 aa8.91□□□□□ -0.98
NIPBL-201ENST00000282516 MARCH10Q8NA82 808 aaPredicted RBP8.91□□□□□ -0.98
NIPBL-201ENST00000282516 RASSF5Q8WWW0 418 aa8.91□□□□□ -0.98
NIPBL-201ENST00000282516 OXNAD1Q96HP4 312 aaPredicted RBP8.91□□□□□ -0.98
NIPBL-201ENST00000282516 ITCHQ96J02 903 aa8.91□□□□□ -0.98
NIPBL-201ENST00000282516 PIF1Q9H611 641 aa8.91□□□□□ -0.98
NIPBL-201ENST00000282516 A1CFQ9NQ94 594 aaKnown RBP8.91□□□□□ -0.98
NIPBL-201ENST00000282516 IQCMA0A1B0GVH7 501 aa8.91□□□□□ -0.98
NIPBL-201ENST00000282516 LIN7AO14910 233 aaPredicted RBP8.91□□□□□ -0.98
NIPBL-201ENST00000282516 MTF1Q14872 753 aa8.91□□□□□ -0.98
NIPBL-201ENST00000282516 ZMYND11Q15326 602 aa8.91□□□□□ -0.98
NIPBL-201ENST00000282516 FAM187BQ17R55 369 aa8.91□□□□□ -0.98
NIPBL-201ENST00000282516 ITIH5Q86UX2 942 aa8.91□□□□□ -0.98
NIPBL-201ENST00000282516 FBXO39Q8N4B4 442 aa8.91□□□□□ -0.98
NIPBL-201ENST00000282516 SLC39A8Q9C0K1 460 aa8.91□□□□□ -0.98
NIPBL-201ENST00000282516 AREL1O15033 823 aa8.91□□□□□ -0.98
NIPBL-201ENST00000282516 TCEA3O75764 348 aa8.91□□□□□ -0.98
NIPBL-201ENST00000282516 LDOC1O95751 146 aaPredicted RBP8.91□□□□□ -0.98
NIPBL-201ENST00000282516 CPA3P15088 417 aa8.91□□□□□ -0.98
NIPBL-201ENST00000282516 OMPP47874 163 aa8.91□□□□□ -0.98
NIPBL-201ENST00000282516 DLG1Q12959 904 aa8.91□□□□□ -0.98
NIPBL-201ENST00000282516 MARK2Q7KZI7 788 aaKnown RBP8.91□□□□□ -0.98
NIPBL-201ENST00000282516 EIF3MQ7L2H7 374 aaKnown RBP8.91□□□□□ -0.98
NIPBL-201ENST00000282516 TPCN2Q8NHX9 752 aa8.91□□□□□ -0.98
NIPBL-201ENST00000282516 ZSCAN18Q8TBC5 510 aaPredicted RBP8.91□□□□□ -0.98
NIPBL-201ENST00000282516 SKA1Q96BD8 255 aa8.91□□□□□ -0.98
NIPBL-201ENST00000282516 MARK1Q9P0L2 795 aa8.91□□□□□ -0.98
NIPBL-201ENST00000282516 MYH3P11055 1940 aa8.9□□□□□ -0.98
NIPBL-201ENST00000282516 IRGMA1A4Y4 181 aa8.9□□□□□ -0.98
NIPBL-201ENST00000282516 RHOAP61586 193 aa8.9□□□□□ -0.98
NIPBL-201ENST00000282516 SGCGQ13326 291 aa8.9□□□□□ -0.98
NIPBL-201ENST00000282516 PAGE2BQ5JRK9 111 aa8.9□□□□□ -0.98
NIPBL-201ENST00000282516 DSG4Q86SJ6 1040 aa8.9□□□□□ -0.98
NIPBL-201ENST00000282516 DEPDC4Q8N2C3 294 aa8.9□□□□□ -0.98
NIPBL-201ENST00000282516 HNRNPLLQ8WVV9 542 aaKnown RBP8.9□□□□□ -0.98
NIPBL-201ENST00000282516 TEKT5Q96M29 485 aa8.9□□□□□ -0.98
NIPBL-201ENST00000282516 CPNE1Q99829 537 aa8.9□□□□□ -0.98
NIPBL-201ENST00000282516 SPATA5L1Q9BVQ7 753 aa8.9□□□□□ -0.98
NIPBL-201ENST00000282516 CELF4Q9BZC1 486 aaKnown RBP8.9□□□□□ -0.98
NIPBL-201ENST00000282516 NT5MQ9NPB1 228 aa8.9□□□□□ -0.98
NIPBL-201ENST00000282516 ERGIC3Q9Y282 383 aa8.9□□□□□ -0.98
NIPBL-201ENST00000282516 ABCA8O94911 1581 aa8.9□□□□□ -0.98
NIPBL-201ENST00000282516 SWI5Q1ZZU3 235 aa8.9□□□□□ -0.98
NIPBL-201ENST00000282516 DHRSXQ8N5I4 330 aa8.9□□□□□ -0.98
NIPBL-201ENST00000282516 BHMTQ93088 406 aa8.9□□□□□ -0.98
NIPBL-201ENST00000282516 ASB2Q96Q27 587 aa8.9□□□□□ -0.98
NIPBL-201ENST00000282516 PFDN2Q9UHV9 154 aa8.9□□□□□ -0.98
NIPBL-201ENST00000282516 NUDT5Q9UKK9 219 aa8.9□□□□□ -0.98
NIPBL-201ENST00000282516 EPHB3P54753 998 aa8.9□□□□□ -0.98
NIPBL-201ENST00000282516 RPL10AP62906 217 aaKnown RBP8.9□□□□□ -0.98
NIPBL-201ENST00000282516 HPS6Q86YV9 775 aa8.9□□□□□ -0.98
NIPBL-201ENST00000282516 GSDMCQ9BYG8 508 aa8.9□□□□□ -0.98
NIPBL-201ENST00000282516 DPP3Q9NY33 737 aa8.9□□□□□ -0.98
NIPBL-201ENST00000282516 CROTQ9UKG9 612 aa8.9□□□□□ -0.98
NIPBL-201ENST00000282516 CKMP06732 381 aa8.9□□□□□ -0.98
NIPBL-201ENST00000282516 CLUP10909 449 aa8.9□□□□□ -0.98
NIPBL-201ENST00000282516 ETS1P14921 441 aa8.9□□□□□ -0.98
NIPBL-201ENST00000282516 SLC1A6P48664 564 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms