RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 URODP06132 367 aa21.63■■□□□ 1.05
YBX3-202ENST00000279550 RPL17P18621 184 aaKnown RBP21.63■■□□□ 1.05
YBX3-202ENST00000279550 SEMA3BQ13214 749 aa21.63■■□□□ 1.05
YBX3-202ENST00000279550 BSPRYQ5W0U4 402 aa21.63■■□□□ 1.05
YBX3-202ENST00000279550 RNF19BQ6ZMZ0 732 aa21.63■■□□□ 1.05
YBX3-202ENST00000279550 TAC4Q86UU9 113 aa21.63■■□□□ 1.05
YBX3-202ENST00000279550 TNS4Q8IZW8 715 aa21.63■■□□□ 1.05
YBX3-202ENST00000279550 SCML4Q8N228 414 aa21.63■■□□□ 1.05
YBX3-202ENST00000279550 FBXO36Q8NEA4 188 aa21.63■■□□□ 1.05
YBX3-202ENST00000279550 TBK1Q9UHD2 729 aa21.63■■□□□ 1.05
YBX3-202ENST00000279550 PRDM4Q9UKN5 801 aa21.63■■□□□ 1.05
YBX3-202ENST00000279550 EXOC1LA0A1B0GW35 172 aa21.62■■□□□ 1.05
YBX3-202ENST00000279550 EEF2KO00418 725 aaKnown RBP21.62■■□□□ 1.05
YBX3-202ENST00000279550 METTL18O95568 372 aa21.62■■□□□ 1.05
YBX3-202ENST00000279550 OR1D2P34982 312 aa21.62■■□□□ 1.05
YBX3-202ENST00000279550 MAGEA11P43364 429 aa21.62■■□□□ 1.05
YBX3-202ENST00000279550 PGFP49763 221 aa21.62■■□□□ 1.05
YBX3-202ENST00000279550 SCAPQ12770 1279 aa21.62■■□□□ 1.05
YBX3-202ENST00000279550 SHHQ15465 462 aa21.62■■□□□ 1.05
YBX3-202ENST00000279550 TP53INP2Q8IXH6 220 aa21.62■■□□□ 1.05
YBX3-202ENST00000279550 AGGF1Q8N302 714 aaeCLIP21.62■■□□□ 1.05
YBX3-202ENST00000279550 KLHL23Q8NBE8 558 aa21.62■■□□□ 1.05
YBX3-202ENST00000279550 SPPL2BQ8TCT7 592 aa21.62■■□□□ 1.05
YBX3-202ENST00000279550 CLSTN3Q9BQT9 956 aa21.62■■□□□ 1.05
YBX3-202ENST00000279550 ETNK1Q9HBU6 452 aa21.62■■□□□ 1.05
YBX3-202ENST00000279550 PPANQ9NQ55 473 aaKnown RBP21.62■■□□□ 1.05
YBX3-202ENST00000279550 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.62■■□□□ 1.05
YBX3-202ENST00000279550 WDR27A2RRH5 827 aa21.61■■□□□ 1.05
YBX3-202ENST00000279550 E7EVH7 732 aa21.61■■□□□ 1.05
YBX3-202ENST00000279550 DCLK1O15075 740 aa21.61■■□□□ 1.05
YBX3-202ENST00000279550 GCATO75600 419 aa21.61■■□□□ 1.05
YBX3-202ENST00000279550 SSTR1P30872 391 aa21.61■■□□□ 1.05
YBX3-202ENST00000279550 MAGEA6P43360 314 aa21.61■■□□□ 1.05
YBX3-202ENST00000279550 CXCR3P49682 368 aa21.61■■□□□ 1.05
YBX3-202ENST00000279550 RFX8Q6ZV50 586 aa21.61■■□□□ 1.05
YBX3-202ENST00000279550 TTC9BQ8N6N2 239 aa21.61■■□□□ 1.05
YBX3-202ENST00000279550 DQX1Q8TE96 717 aaKnown RBP21.61■■□□□ 1.05
YBX3-202ENST00000279550 PYROXD1Q8WU10 500 aa21.61■■□□□ 1.05
YBX3-202ENST00000279550 C2orf15Q8WU43 125 aaKnown RBP21.61■■□□□ 1.05
YBX3-202ENST00000279550 ATXN2LQ8WWM7 1075 aaKnown RBP21.61■■□□□ 1.05
YBX3-202ENST00000279550 MAML1Q92585 1016 aa21.61■■□□□ 1.05
YBX3-202ENST00000279550 XPO6Q96QU8 1125 aaKnown RBP21.61■■□□□ 1.05
YBX3-202ENST00000279550 LGMNQ99538 433 aa21.61■■□□□ 1.05
YBX3-202ENST00000279550 LINC01553A4QN01 128 aa21.6■■□□□ 1.05
YBX3-202ENST00000279550 TNFRSF10BO14763 440 aa21.6■■□□□ 1.05
YBX3-202ENST00000279550 TRIM66O15016 1216 aa21.6■■□□□ 1.05
YBX3-202ENST00000279550 CDH16O75309 829 aa21.6■■□□□ 1.05
YBX3-202ENST00000279550 VNN2O95498 520 aa21.6■■□□□ 1.05
YBX3-202ENST00000279550 BMPR1AP36894 532 aa21.6■■□□□ 1.05
YBX3-202ENST00000279550 EFTUD2Q15029 972 aaKnown RBP eCLIP21.6■■□□□ 1.057e-14■■■□□ 17.9
YBX3-202ENST00000279550 TMED2Q15363 201 aa21.6■■□□□ 1.05
YBX3-202ENST00000279550 FAM109BQ6ICB4 259 aaPredicted RBP21.6■■□□□ 1.05
YBX3-202ENST00000279550 NLRP14Q86W24 1093 aa21.6■■□□□ 1.05
YBX3-202ENST00000279550 SCN4BQ8IWT1 228 aa21.6■■□□□ 1.05
YBX3-202ENST00000279550 PDIK1LQ8N165 341 aa21.6■■□□□ 1.05
YBX3-202ENST00000279550 STKLD1Q8NE28 680 aa21.6■■□□□ 1.05
YBX3-202ENST00000279550 MRPL17Q9NRX2 175 aaKnown RBP21.6■■□□□ 1.05
YBX3-202ENST00000279550 RRN3Q9NYV6 651 aa21.6■■□□□ 1.05
YBX3-202ENST00000279550 RABGEF1Q9UJ41 708 aa21.6■■□□□ 1.05
YBX3-202ENST00000279550 CHMP2BQ9UQN3 213 aa21.6■■□□□ 1.05
YBX3-202ENST00000279550 C5orf60A6NFR6 353 aa21.6■■□□□ 1.05
YBX3-202ENST00000279550 SRRM3A6NNA2 597 aaPredicted RBP21.6■■□□□ 1.05
YBX3-202ENST00000279550 POC1B-GALNT4F8VUJ3 575 aa21.6■■□□□ 1.05
YBX3-202ENST00000279550 AVILO75366 819 aa21.6■■□□□ 1.05
YBX3-202ENST00000279550 DNAJB2P25686 324 aa21.6■■□□□ 1.05
YBX3-202ENST00000279550 CTNNB1P35222 781 aa21.6■■□□□ 1.05
YBX3-202ENST00000279550 ELK3P41970 407 aa21.6■■□□□ 1.05
YBX3-202ENST00000279550 SLC5A3P53794 718 aa21.6■■□□□ 1.05
YBX3-202ENST00000279550 IFRD2Q12894 506 aaPredicted RBP21.6■■□□□ 1.05
YBX3-202ENST00000279550 PAFAH1B3Q15102 231 aaKnown RBP21.6■■□□□ 1.05
YBX3-202ENST00000279550 PRKD1Q15139 912 aaPredicted RBP21.6■■□□□ 1.05
YBX3-202ENST00000279550 GPR65Q8IYL9 337 aa21.6■■□□□ 1.05
YBX3-202ENST00000279550 ATP11CQ8NB49 1132 aa21.6■■□□□ 1.05
YBX3-202ENST00000279550 TFB1MQ8WVM0 346 aaKnown RBP21.6■■□□□ 1.05
YBX3-202ENST00000279550 AUTS2Q8WXX7 1259 aa21.6■■□□□ 1.05
YBX3-202ENST00000279550 CENPTQ96BT3 561 aa21.6■■□□□ 1.05
YBX3-202ENST00000279550 C8orf48Q96LL4 319 aa21.6■■□□□ 1.05
YBX3-202ENST00000279550 ZBP1Q9H171 429 aa21.6■■□□□ 1.05
YBX3-202ENST00000279550 CRISPLD1Q9H336 500 aa21.6■■□□□ 1.05
YBX3-202ENST00000279550 PRDM16Q9HAZ2 1276 aa21.6■■□□□ 1.05
YBX3-202ENST00000279550 GRXCR1A8MXD5 290 aa21.59■■□□□ 1.05
YBX3-202ENST00000279550 HACD1B0YJ81 288 aa21.59■■□□□ 1.05
YBX3-202ENST00000279550 MYOGP15173 224 aa21.59■■□□□ 1.05
YBX3-202ENST00000279550 CCT5P48643 541 aa21.59■■□□□ 1.05
YBX3-202ENST00000279550 AIF1P55008 147 aa21.59■■□□□ 1.05
YBX3-202ENST00000279550 DDR2Q16832 855 aa21.59■■□□□ 1.05
YBX3-202ENST00000279550 TAOK1Q7L7X3 1001 aa21.59■■□□□ 1.05
YBX3-202ENST00000279550 SCD5Q86SK9 330 aa21.59■■□□□ 1.05
YBX3-202ENST00000279550 TDRPQ86YL5 185 aa21.59■■□□□ 1.05
YBX3-202ENST00000279550 KLC2Q9H0B6 622 aa21.59■■□□□ 1.05
YBX3-202ENST00000279550 SLC27A5Q9Y2P5 690 aa21.59■■□□□ 1.05
YBX3-202ENST00000279550 RWDD3Q9Y3V2 267 aa21.59■■□□□ 1.05
YBX3-202ENST00000279550 RANBP2P49792 3224 aaKnown RBP21.59■■□□□ 1.05
YBX3-202ENST00000279550 CTSAP10619 480 aa21.58■■□□□ 1.05
YBX3-202ENST00000279550 ERCC2P18074 760 aa21.58■■□□□ 1.05
YBX3-202ENST00000279550 GPR15P49685 360 aa21.58■■□□□ 1.05
YBX3-202ENST00000279550 DUSP4Q13115 394 aa21.58■■□□□ 1.05
YBX3-202ENST00000279550 MPP2Q14168 576 aa21.58■■□□□ 1.05
YBX3-202ENST00000279550 MGAT5BQ3V5L5 792 aa21.58■■□□□ 1.05
YBX3-202ENST00000279550 SDHAF4Q5VUM1 108 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms