RNA–Protein interactions for RNA: ENST00000278386.10

CD44-203, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best) BASIC

Gene CD44, Length 484 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-203ENST00000278386 P4HA2O15460 535 aa13.26□□□□□ -0.29
CD44-203ENST00000278386 IRAK2O43187 625 aa13.26□□□□□ -0.29
CD44-203ENST00000278386 MOCS2O96007 188 aaPredicted RBP13.26□□□□□ -0.29
CD44-203ENST00000278386 IGLV3-27P01718 113 aa13.26□□□□□ -0.29
CD44-203ENST00000278386 DLDP09622 509 aaKnown RBP13.26□□□□□ -0.29
CD44-203ENST00000278386 FTH1P19P0C7X4 201 aa13.26□□□□□ -0.29
CD44-203ENST00000278386 SLC6A4P31645 630 aa13.26□□□□□ -0.29
CD44-203ENST00000278386 STX17P56962 302 aa13.26□□□□□ -0.29
CD44-203ENST00000278386 ST8SIA6P61647 398 aa13.26□□□□□ -0.29
CD44-203ENST00000278386 RING1Q06587 406 aa13.26□□□□□ -0.29
CD44-203ENST00000278386 AKAP13Q12802 2813 aa13.26□□□□□ -0.29
CD44-203ENST00000278386 CNGA2Q16280 664 aa13.26□□□□□ -0.29
CD44-203ENST00000278386 PTPRNQ16849 979 aa13.26□□□□□ -0.29
CD44-203ENST00000278386 FAM133BQ5BKY9 247 aaKnown RBP13.26□□□□□ -0.29
CD44-203ENST00000278386 PIK3R6Q5UE93 754 aa13.26□□□□□ -0.29
CD44-203ENST00000278386 ZNF776Q68DI1 518 aaPredicted RBP13.26□□□□□ -0.29
CD44-203ENST00000278386 TTI2Q6NXR4 508 aa13.26□□□□□ -0.29
CD44-203ENST00000278386 IL27RAQ6UWB1 636 aa13.26□□□□□ -0.29
CD44-203ENST00000278386 CCDC117Q8IWD4 279 aaPredicted RBP13.26□□□□□ -0.29
CD44-203ENST00000278386 KDF1Q8NAX2 398 aaPredicted RBP13.26□□□□□ -0.29
CD44-203ENST00000278386 HSFY1Q96LI6 401 aa13.26□□□□□ -0.29
CD44-203ENST00000278386 PRICKLE1Q96MT3 831 aaPredicted RBP13.26□□□□□ -0.29
CD44-203ENST00000278386 DDX50Q9BQ39 737 aaKnown RBP13.26□□□□□ -0.29
CD44-203ENST00000278386 ZSWIM1Q9BR11 485 aa13.26□□□□□ -0.29
CD44-203ENST00000278386 TMEM245Q9H330 911 aa13.26□□□□□ -0.29
CD44-203ENST00000278386 C6orf106Q9H6K1 298 aaPredicted RBP13.26□□□□□ -0.29
CD44-203ENST00000278386 IL21RQ9HBE5 538 aa13.26□□□□□ -0.29
CD44-203ENST00000278386 RALYQ9UKM9 306 aaKnown RBP13.26□□□□□ -0.29
CD44-203ENST00000278386 A0A1B0GVT2 93 aa13.25□□□□□ -0.29
CD44-203ENST00000278386 CAPN9O14815 690 aa13.25□□□□□ -0.29
CD44-203ENST00000278386 PMM2O15305 246 aa13.25□□□□□ -0.29
CD44-203ENST00000278386 SART1O43290 800 aaKnown RBP13.25□□□□□ -0.29
CD44-203ENST00000278386 GABBR2O75899 941 aa13.25□□□□□ -0.29
CD44-203ENST00000278386 SEMA4FO95754 770 aa13.25□□□□□ -0.29
CD44-203ENST00000278386 AFPP02771 609 aaKnown RBP13.25□□□□□ -0.29
CD44-203ENST00000278386 ACSL1P33121 698 aa13.25□□□□□ -0.29
CD44-203ENST00000278386 GCNT1Q02742 428 aa13.25□□□□□ -0.29
CD44-203ENST00000278386 KCNH2Q12809 1159 aa13.25□□□□□ -0.29
CD44-203ENST00000278386 PAK1Q13153 545 aa13.25□□□□□ -0.29
CD44-203ENST00000278386 CDH18Q13634 790 aa13.25□□□□□ -0.29
CD44-203ENST00000278386 CARNMT1Q8N4J0 409 aa13.25□□□□□ -0.29
CD44-203ENST00000278386 ADAM32Q8TC27 787 aa13.25□□□□□ -0.29
CD44-203ENST00000278386 DQX1Q8TE96 717 aaKnown RBP13.25□□□□□ -0.29
CD44-203ENST00000278386 GANCQ8TET4 914 aa13.25□□□□□ -0.29
CD44-203ENST00000278386 BTBD1Q9H0C5 482 aa13.25□□□□□ -0.29
CD44-203ENST00000278386 INTS2Q9H0H0 1204 aaKnown RBP13.25□□□□□ -0.29
CD44-203ENST00000278386 PCED1AQ9H1Q7 454 aa13.25□□□□□ -0.29
CD44-203ENST00000278386 TM7SF3Q9NS93 570 aa13.25□□□□□ -0.29
CD44-203ENST00000278386 SUN2Q9UH99 717 aa13.25□□□□□ -0.29
CD44-203ENST00000278386 FNDC3AQ9Y2H6 1198 aaKnown RBP13.25□□□□□ -0.29
CD44-203ENST00000278386 CEP83Q9Y592 693 aa13.25□□□□□ -0.29
CD44-203ENST00000278386 PLXNB3Q9ULL4 1909 aa13.25□□□□□ -0.29
CD44-203ENST00000278386 SPEGQ15772 3267 aa13.24□□□□□ -0.29
CD44-203ENST00000278386 FSBPO95073 299 aa13.24□□□□□ -0.29
CD44-203ENST00000278386 APOEP02649 317 aa13.24□□□□□ -0.29
CD44-203ENST00000278386 ASLP04424 464 aa13.24□□□□□ -0.29
CD44-203ENST00000278386 ACADSBP45954 432 aa13.24□□□□□ -0.29
CD44-203ENST00000278386 CSNK1EP49674 416 aaKnown RBP13.24□□□□□ -0.29
CD44-203ENST00000278386 AFF3P51826 1226 aaKnown RBP13.24□□□□□ -0.29
CD44-203ENST00000278386 RPS14P62263 151 aaKnown RBP13.24□□□□□ -0.29
CD44-203ENST00000278386 ZBTB16Q05516 673 aa13.24□□□□□ -0.29
CD44-203ENST00000278386 TEAD4Q15561 434 aa13.24□□□□□ -0.29
CD44-203ENST00000278386 HLA-BQ31612 363 aa13.24□□□□□ -0.29
CD44-203ENST00000278386 MPP7Q5T2T1 576 aa13.24□□□□□ -0.29
CD44-203ENST00000278386 NADSYN1Q6IA69 706 aa13.24□□□□□ -0.29
CD44-203ENST00000278386 RAB44Q7Z6P3 723 aaPredicted RBP13.24□□□□□ -0.29
CD44-203ENST00000278386 ADAT2Q7Z6V5 191 aaKnown RBP13.24□□□□□ -0.29
CD44-203ENST00000278386 KIAA0907Q7Z7F0 614 aaPredicted RBP13.24□□□□□ -0.29
CD44-203ENST00000278386 TAC4Q86UU9 113 aa13.24□□□□□ -0.29
CD44-203ENST00000278386 CHSY1Q86X52 802 aa13.24□□□□□ -0.29
CD44-203ENST00000278386 PNPLA1Q8N8W4 532 aa13.24□□□□□ -0.29
CD44-203ENST00000278386 EHBP1Q8NDI1 1231 aa13.24□□□□□ -0.29
CD44-203ENST00000278386 LMO3Q8TAP4 145 aa13.24□□□□□ -0.29
CD44-203ENST00000278386 FCRL2Q96LA5 508 aaPredicted RBP13.24□□□□□ -0.29
CD44-203ENST00000278386 IRX2Q9BZI1 471 aaPredicted RBP13.24□□□□□ -0.29
CD44-203ENST00000278386 NUCKS1Q9H1E3 243 aaKnown RBP13.24□□□□□ -0.29
CD44-203ENST00000278386 MTG2Q9H4K7 406 aa13.24□□□□□ -0.29
CD44-203ENST00000278386 PRSS16Q9NQE7 514 aa13.24□□□□□ -0.29
CD44-203ENST00000278386 PCOLCE2Q9UKZ9 415 aa13.24□□□□□ -0.29
CD44-203ENST00000278386 NAALADL1Q9UQQ1 740 aa13.24□□□□□ -0.29
CD44-203ENST00000278386 APOBEC2Q9Y235 224 aaKnown RBP13.24□□□□□ -0.29
CD44-203ENST00000278386 TLR6Q9Y2C9 796 aa13.24□□□□□ -0.29
CD44-203ENST00000278386 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.24□□□□□ -0.29
CD44-203ENST00000278386 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.24□□□□□ -0.29
CD44-203ENST00000278386 FAM208BQ5VWN6 2430 aa13.23□□□□□ -0.29
CD44-203ENST00000278386 FAM47DPA6NHR8 397 aa13.23□□□□□ -0.29
CD44-203ENST00000278386 SRRM3A6NNA2 597 aaPredicted RBP13.23□□□□□ -0.29
CD44-203ENST00000278386 PPP1R3GB7ZBB8 358 aa13.23□□□□□ -0.29
CD44-203ENST00000278386 THAP12O43422 761 aa13.23□□□□□ -0.29
CD44-203ENST00000278386 MED7O43513 233 aa13.23□□□□□ -0.29
CD44-203ENST00000278386 RNASEH1O60930 286 aaKnown RBP13.23□□□□□ -0.29
CD44-203ENST00000278386 LETM1O95202 739 aaPredicted RBP13.23□□□□□ -0.29
CD44-203ENST00000278386 MOCS3O95396 460 aa13.23□□□□□ -0.29
CD44-203ENST00000278386 GNA14O95837 355 aa13.23□□□□□ -0.29
CD44-203ENST00000278386 ZNF883P0CG24 379 aa13.23□□□□□ -0.29
CD44-203ENST00000278386 CSKP41240 450 aa13.23□□□□□ -0.29
CD44-203ENST00000278386 RPS24P62847 133 aaKnown RBP13.23□□□□□ -0.29
CD44-203ENST00000278386 BNC1Q01954 994 aa13.23□□□□□ -0.29
CD44-203ENST00000278386 NNTQ13423 1086 aa13.23□□□□□ -0.29
CD44-203ENST00000278386 RNF219Q5W0B1 726 aaPredicted RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms