RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 TPMTP51580 245 aa10.11□□□□□ -0.79
VPS41-201ENST00000265745 COPAP53621 1224 aa10.11□□□□□ -0.79
VPS41-201ENST00000265745 TBX4P57082 545 aa10.11□□□□□ -0.79
VPS41-201ENST00000265745 ARID5AQ03989 594 aa10.11□□□□□ -0.79
VPS41-201ENST00000265745 MEA1Q16626 185 aa10.11□□□□□ -0.79
VPS41-201ENST00000265745 PTPRNQ16849 979 aa10.11□□□□□ -0.79
VPS41-201ENST00000265745 SYCP2LQ5T4T6 812 aa10.11□□□□□ -0.79
VPS41-201ENST00000265745 SYPL2Q5VXT5 272 aa10.11□□□□□ -0.79
VPS41-201ENST00000265745 DENND1BQ6P3S1 775 aa10.11□□□□□ -0.79
VPS41-201ENST00000265745 SERPINA13PQ6UXR4 307 aa10.11□□□□□ -0.79
VPS41-201ENST00000265745 CHST9Q7L1S5 443 aa10.11□□□□□ -0.79
VPS41-201ENST00000265745 BEND5Q7L4P6 421 aa10.11□□□□□ -0.79
VPS41-201ENST00000265745 ENOSF1Q7L5Y1 443 aa10.11□□□□□ -0.79
VPS41-201ENST00000265745 RABEPKQ7Z6M1 372 aa10.11□□□□□ -0.79
VPS41-201ENST00000265745 TMEM110Q86TL2 294 aa10.11□□□□□ -0.79
VPS41-201ENST00000265745 IRF2BP1Q8IU81 584 aa10.11□□□□□ -0.79
VPS41-201ENST00000265745 CADM4Q8NFZ8 388 aa10.11□□□□□ -0.79
VPS41-201ENST00000265745 DQX1Q8TE96 717 aaKnown RBP10.11□□□□□ -0.79
VPS41-201ENST00000265745 WFIKKN2Q8TEU8 576 aa10.11□□□□□ -0.79
VPS41-201ENST00000265745 DNASE2BQ8WZ79 361 aa10.11□□□□□ -0.79
VPS41-201ENST00000265745 PRCCQ92733 491 aaPredicted RBP10.11□□□□□ -0.79
VPS41-201ENST00000265745 SLC39A13Q96H72 371 aa10.11□□□□□ -0.79
VPS41-201ENST00000265745 LMLNQ96KR4 655 aa10.11□□□□□ -0.79
VPS41-201ENST00000265745 FCRL2Q96LA5 508 aaPredicted RBP10.11□□□□□ -0.79
VPS41-201ENST00000265745 TMEM245Q9H330 911 aa10.11□□□□□ -0.79
VPS41-201ENST00000265745 ACP6Q9NPH0 428 aa10.11□□□□□ -0.79
VPS41-201ENST00000265745 FSCN3Q9NQT6 498 aa10.11□□□□□ -0.79
VPS41-201ENST00000265745 ST7Q9NRC1 585 aa10.11□□□□□ -0.79
VPS41-201ENST00000265745 ABCB8Q9NUT2 735 aa10.11□□□□□ -0.79
VPS41-201ENST00000265745 GGA2Q9UJY4 613 aa10.11□□□□□ -0.79
VPS41-201ENST00000265745 ANGPTL2Q9UKU9 493 aa10.11□□□□□ -0.79
VPS41-201ENST00000265745 NAALADL1Q9UQQ1 740 aa10.11□□□□□ -0.79
VPS41-201ENST00000265745 TLR6Q9Y2C9 796 aa10.11□□□□□ -0.79
VPS41-201ENST00000265745 NFE2L3Q9Y4A8 694 aa10.11□□□□□ -0.79
VPS41-201ENST00000265745 HELZP42694 1942 aaKnown RBP10.11□□□□□ -0.79
VPS41-201ENST00000265745 CHD8Q9HCK8 2581 aa10.11□□□□□ -0.79
VPS41-201ENST00000265745 BECN2A8MW95 431 aa10.1□□□□□ -0.79
VPS41-201ENST00000265745 UPK3BL1B0FP48 263 aa10.1□□□□□ -0.79
VPS41-201ENST00000265745 UPK3BL2E5RIL1 263 aa10.1□□□□□ -0.79
VPS41-201ENST00000265745 PAPSS1O43252 624 aaPredicted RBP10.1□□□□□ -0.79
VPS41-201ENST00000265745 MED7O43513 233 aa10.1□□□□□ -0.79
VPS41-201ENST00000265745 TBL1XO60907 577 aa10.1□□□□□ -0.79
VPS41-201ENST00000265745 DLDP09622 509 aaKnown RBP10.1□□□□□ -0.79
VPS41-201ENST00000265745 PABPC1P11940 636 aaKnown RBP10.1□□□□□ -0.79
VPS41-201ENST00000265745 HLA-EP13747 358 aa10.1□□□□□ -0.79
VPS41-201ENST00000265745 SLC9A1P19634 815 aa10.1□□□□□ -0.79
VPS41-201ENST00000265745 MAOBP27338 520 aa10.1□□□□□ -0.79
VPS41-201ENST00000265745 OXTRP30559 389 aa10.1□□□□□ -0.79
VPS41-201ENST00000265745 SEMA3BQ13214 749 aa10.1□□□□□ -0.79
VPS41-201ENST00000265745 NNTQ13423 1086 aa10.1□□□□□ -0.79
VPS41-201ENST00000265745 CAMK2GQ13555 558 aaPredicted RBP10.1□□□□□ -0.79
VPS41-201ENST00000265745 WDR45BQ5MNZ6 344 aa10.1□□□□□ -0.79
VPS41-201ENST00000265745 NADSYN1Q6IA69 706 aa10.1□□□□□ -0.79
VPS41-201ENST00000265745 GJB7Q6PEY0 223 aa10.1□□□□□ -0.79
VPS41-201ENST00000265745 TRIM65Q6PJ69 517 aa10.1□□□□□ -0.79
VPS41-201ENST00000265745 PIP4P1Q86T03 277 aa10.1□□□□□ -0.79
VPS41-201ENST00000265745 CREBRFQ8IUR6 639 aa10.1□□□□□ -0.79
VPS41-201ENST00000265745 AHI1Q8N157 1196 aa10.1□□□□□ -0.79
VPS41-201ENST00000265745 MLKLQ8NB16 471 aa10.1□□□□□ -0.79
VPS41-201ENST00000265745 OR2T3Q8NH03 318 aa10.1□□□□□ -0.79
VPS41-201ENST00000265745 FIBINQ8TAL6 211 aa10.1□□□□□ -0.79
VPS41-201ENST00000265745 PRR7Q8TB68 274 aa10.1□□□□□ -0.79
VPS41-201ENST00000265745 ADAM32Q8TC27 787 aa10.1□□□□□ -0.79
VPS41-201ENST00000265745 WFDC5Q8TCV5 224 aa10.1□□□□□ -0.79
VPS41-201ENST00000265745 CYB5D2Q8WUJ1 264 aa10.1□□□□□ -0.79
VPS41-201ENST00000265745 FAM149B1Q96BN6 582 aa10.1□□□□□ -0.79
VPS41-201ENST00000265745 MYEOVQ96EZ4 313 aa10.1□□□□□ -0.79
VPS41-201ENST00000265745 FAM81BQ96LP2 452 aa10.1□□□□□ -0.79
VPS41-201ENST00000265745 SERPINB11Q96P15 392 aa10.1□□□□□ -0.79
VPS41-201ENST00000265745 NUP58Q9BVL2 599 aa10.1□□□□□ -0.79
VPS41-201ENST00000265745 GPR174Q9BXC1 333 aa10.1□□□□□ -0.79
VPS41-201ENST00000265745 ALG2Q9H553 416 aa10.1□□□□□ -0.79
VPS41-201ENST00000265745 CYTH4Q9UIA0 394 aa10.1□□□□□ -0.79
VPS41-201ENST00000265745 SPAG17Q6Q759 2223 aa10.1□□□□□ -0.79
VPS41-201ENST00000265745 GTPBP10A4D1E9 387 aaKnown RBP10.09□□□□□ -0.79
VPS41-201ENST00000265745 METTL12A8MUP2 240 aa10.09□□□□□ -0.79
VPS41-201ENST00000265745 E5RJQ4 531 aa10.09□□□□□ -0.79
VPS41-201ENST00000265745 THAP12O43422 761 aa10.09□□□□□ -0.79
VPS41-201ENST00000265745 ATP5BP06576 529 aaKnown RBP10.09□□□□□ -0.79
VPS41-201ENST00000265745 GNSP15586 552 aa10.09□□□□□ -0.79
VPS41-201ENST00000265745 PON1P27169 355 aa10.09□□□□□ -0.79
VPS41-201ENST00000265745 GNA15P30679 374 aa10.09□□□□□ -0.79
VPS41-201ENST00000265745 CD70P32970 193 aa10.09□□□□□ -0.79
VPS41-201ENST00000265745 ATXN3P54252 364 aaPredicted RBP10.09□□□□□ -0.79
VPS41-201ENST00000265745 RPS24P62847 133 aaKnown RBP10.09□□□□□ -0.79
VPS41-201ENST00000265745 YWHAZP63104 245 aaKnown RBP10.09□□□□□ -0.79
VPS41-201ENST00000265745 APBA1Q02410 837 aa10.09□□□□□ -0.79
VPS41-201ENST00000265745 TAF5Q15542 800 aa10.09□□□□□ -0.79
VPS41-201ENST00000265745 EXOC3L4Q17RC7 722 aa10.09□□□□□ -0.79
VPS41-201ENST00000265745 PLEKHG6Q3KR16 790 aa10.09□□□□□ -0.79
VPS41-201ENST00000265745 FNDC3BQ53EP0 1204 aaKnown RBP10.09□□□□□ -0.79
VPS41-201ENST00000265745 MS4A13Q5J8X5 152 aa10.09□□□□□ -0.79
VPS41-201ENST00000265745 MBLAC2Q68D91 279 aa10.09□□□□□ -0.79
VPS41-201ENST00000265745 GBP6Q6ZN66 633 aa10.09□□□□□ -0.79
VPS41-201ENST00000265745 TAC4Q86UU9 113 aa10.09□□□□□ -0.79
VPS41-201ENST00000265745 RGL4Q8IZJ4 473 aa10.09□□□□□ -0.79
VPS41-201ENST00000265745 WDTC1Q8N5D0 677 aa10.09□□□□□ -0.79
VPS41-201ENST00000265745 MINDY1Q8N5J2 469 aa10.09□□□□□ -0.79
VPS41-201ENST00000265745 ZNF557Q8N988 423 aaPredicted RBP10.09□□□□□ -0.79
VPS41-201ENST00000265745 DEFB124Q8NES8 71 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms