RNA–Protein interactions for RNA: ENST00000263511.8

CROCCP3-201, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CROCCP3, Length 5,368 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-201ENST00000263511 KPNA3O00505 521 aaPredicted RBP17.23■□□□□ 0.35
CROCCP3-201ENST00000263511 KLHL41O60662 606 aa17.23■□□□□ 0.35
CROCCP3-201ENST00000263511 BGNP21810 368 aa17.23■□□□□ 0.35
CROCCP3-201ENST00000263511 MIPP30301 263 aa17.23■□□□□ 0.35
CROCCP3-201ENST00000263511 SCNN1GP51170 649 aa17.23■□□□□ 0.35
CROCCP3-201ENST00000263511 PRKAA1Q13131 559 aa17.23■□□□□ 0.35
CROCCP3-201ENST00000263511 ARMC12Q5T9G4 340 aa17.23■□□□□ 0.35
CROCCP3-201ENST00000263511 NT5DC1Q5TFE4 455 aa17.23■□□□□ 0.35
CROCCP3-201ENST00000263511 MFSD7Q6UXD7 560 aa17.23■□□□□ 0.35
CROCCP3-201ENST00000263511 KLHL28Q9NXS3 571 aa17.23■□□□□ 0.35
CROCCP3-201ENST00000263511 WDR27A2RRH5 827 aa17.22■□□□□ 0.35
CROCCP3-201ENST00000263511 POLR2EP19388 210 aaKnown RBP17.22■□□□□ 0.35
CROCCP3-201ENST00000263511 SKIV2L2P42285 1042 aaKnown RBP17.22■□□□□ 0.35
CROCCP3-201ENST00000263511 SARSP49591 514 aaKnown RBP17.22■□□□□ 0.35
CROCCP3-201ENST00000263511 RPS7P62081 194 aaKnown RBP17.22■□□□□ 0.35
CROCCP3-201ENST00000263511 PCBP1Q15365 356 aaKnown RBP eCLIP17.22■□□□□ 0.351e-12■■■■■ 65.4
CROCCP3-201ENST00000263511 MTMR8Q96EF0 704 aa17.22■□□□□ 0.35
CROCCP3-201ENST00000263511 ZNF558Q96NG5 402 aa17.22■□□□□ 0.35
CROCCP3-201ENST00000263511 CAAP1Q9H8G2 361 aa17.22■□□□□ 0.35
CROCCP3-201ENST00000263511 KCNK1O00180 336 aa17.22■□□□□ 0.35
CROCCP3-201ENST00000263511 H2AFXP16104 143 aaPredicted RBP17.22■□□□□ 0.35
CROCCP3-201ENST00000263511 MGAT1P26572 445 aa17.22■□□□□ 0.35
CROCCP3-201ENST00000263511 ATP5C1P36542 298 aaKnown RBP17.22■□□□□ 0.35
CROCCP3-201ENST00000263511 ZNF470Q6ECI4 717 aa17.22■□□□□ 0.35
CROCCP3-201ENST00000263511 TMEM154Q6P9G4 183 aa17.22■□□□□ 0.35
CROCCP3-201ENST00000263511 DNAAF5Q86Y56 855 aa17.22■□□□□ 0.35
CROCCP3-201ENST00000263511 TRPC4Q9UBN4 977 aa17.22■□□□□ 0.35
CROCCP3-201ENST00000263511 TAGLN3Q9UI15 199 aa17.22■□□□□ 0.35
CROCCP3-201ENST00000263511 IRF6O14896 467 aa17.22■□□□□ 0.35
CROCCP3-201ENST00000263511 ZNF682O95780 498 aa17.22■□□□□ 0.35
CROCCP3-201ENST00000263511 HOXB8P17481 243 aaPredicted RBP17.22■□□□□ 0.35
CROCCP3-201ENST00000263511 PTPN1P18031 435 aaKnown RBP17.22■□□□□ 0.35
CROCCP3-201ENST00000263511 PRKAA2P54646 552 aa17.22■□□□□ 0.35
CROCCP3-201ENST00000263511 MRPS15P82914 257 aaKnown RBP17.22■□□□□ 0.35
CROCCP3-201ENST00000263511 WDR59Q6PJI9 974 aa17.22■□□□□ 0.35
CROCCP3-201ENST00000263511 CPNE1Q99829 537 aa17.22■□□□□ 0.35
CROCCP3-201ENST00000263511 DUSP9Q99956 384 aaKnown RBP17.22■□□□□ 0.35
CROCCP3-201ENST00000263511 PRRG3Q9BZD7 231 aa17.22■□□□□ 0.35
CROCCP3-201ENST00000263511 DPY30Q9C005 99 aa17.22■□□□□ 0.35
CROCCP3-201ENST00000263511 TNFSF13BQ9Y275 285 aa17.22■□□□□ 0.35
CROCCP3-201ENST00000263511 SLC9A3R1O14745 358 aaPredicted RBP17.22■□□□□ 0.35
CROCCP3-201ENST00000263511 BAIAP3O94812 1187 aa17.22■□□□□ 0.35
CROCCP3-201ENST00000263511 CALB2P22676 271 aa17.22■□□□□ 0.35
CROCCP3-201ENST00000263511 SUSD6Q92537 303 aa17.22■□□□□ 0.35
CROCCP3-201ENST00000263511 TMEM120AQ9BXJ8 343 aa17.22■□□□□ 0.35
CROCCP3-201ENST00000263511 IGFLR1Q9H665 355 aa17.22■□□□□ 0.35
CROCCP3-201ENST00000263511 ARMC7Q9H6L4 198 aa17.22■□□□□ 0.35
CROCCP3-201ENST00000263511 DMGDHQ9UI17 866 aaKnown RBP17.22■□□□□ 0.35
CROCCP3-201ENST00000263511 hCG_2014768A0A024R1R8 64 aa17.21■□□□□ 0.35
CROCCP3-201ENST00000263511 VAPBO95292 243 aa17.21■□□□□ 0.35
CROCCP3-201ENST00000263511 TNNI3P19429 210 aa17.21■□□□□ 0.35
CROCCP3-201ENST00000263511 MLH1P40692 756 aa17.21■□□□□ 0.35
CROCCP3-201ENST00000263511 MMP13P45452 471 aa17.21■□□□□ 0.35
CROCCP3-201ENST00000263511 KCNT2Q6UVM3 1135 aa17.21■□□□□ 0.35
CROCCP3-201ENST00000263511 SCUBE1Q8IWY4 988 aa17.21■□□□□ 0.35
CROCCP3-201ENST00000263511 MYCBPAPQ8TBZ2 947 aa17.21■□□□□ 0.35
CROCCP3-201ENST00000263511 VPS33AQ96AX1 596 aa17.21■□□□□ 0.35
CROCCP3-201ENST00000263511 PHF21BQ96EK2 531 aa17.21■□□□□ 0.35
CROCCP3-201ENST00000263511 POLR1EQ9GZS1 481 aaKnown RBP17.21■□□□□ 0.35
CROCCP3-201ENST00000263511 LRRC4BQ9NT99 713 aa17.21■□□□□ 0.35
CROCCP3-201ENST00000263511 SERPINA4P29622 427 aa17.21■□□□□ 0.35
CROCCP3-201ENST00000263511 CYP2C18P33260 490 aa17.21■□□□□ 0.35
CROCCP3-201ENST00000263511 NOS2P35228 1153 aa17.21■□□□□ 0.35
CROCCP3-201ENST00000263511 N4BP2L1Q5TBK1 243 aaPredicted RBP17.21■□□□□ 0.35
CROCCP3-201ENST00000263511 C1orf186Q6ZWK4 172 aa17.21■□□□□ 0.35
CROCCP3-201ENST00000263511 ELMO3Q96BJ8 720 aa17.21■□□□□ 0.35
CROCCP3-201ENST00000263511 MTMR9Q96QG7 549 aa17.21■□□□□ 0.35
CROCCP3-201ENST00000263511 SLC40A1Q9NP59 571 aa17.21■□□□□ 0.35
CROCCP3-201ENST00000263511 HAO1Q9UJM8 370 aa17.21■□□□□ 0.35
CROCCP3-201ENST00000263511 NAALADL1Q9UQQ1 740 aa17.21■□□□□ 0.35
CROCCP3-201ENST00000263511 SNX13Q9Y5W8 968 aa17.21■□□□□ 0.35
CROCCP3-201ENST00000263511 RIMBP3CA6NJZ7 1639 aa17.21■□□□□ 0.35
CROCCP3-201ENST00000263511 RIMBP3BA6NNM3 1639 aa17.21■□□□□ 0.35
CROCCP3-201ENST00000263511 RIMBP3Q9UFD9 1639 aa17.21■□□□□ 0.35
CROCCP3-201ENST00000263511 DDX3XO00571 662 aaKnown RBP eCLIP17.21■□□□□ 0.35
CROCCP3-201ENST00000263511 CES2O00748 559 aa17.21■□□□□ 0.35
CROCCP3-201ENST00000263511 CYP1A1P04798 512 aaPredicted RBP17.21■□□□□ 0.35
CROCCP3-201ENST00000263511 WNT8BQ93098 351 aa17.21■□□□□ 0.35
CROCCP3-201ENST00000263511 DTNBP1Q96EV8 351 aa17.21■□□□□ 0.35
CROCCP3-201ENST00000263511 OSBPL10Q9BXB5 764 aa17.21■□□□□ 0.35
CROCCP3-201ENST00000263511 PREX1Q8TCU6 1659 aa17.21■□□□□ 0.35
CROCCP3-201ENST00000263511 APOC4-APOC2K7ER74 178 aa17.21■□□□□ 0.35
CROCCP3-201ENST00000263511 ADCY6O43306 1168 aa17.21■□□□□ 0.35
CROCCP3-201ENST00000263511 MTA2O94776 668 aa17.21■□□□□ 0.35
CROCCP3-201ENST00000263511 APOC2P02655 101 aa17.21■□□□□ 0.35
CROCCP3-201ENST00000263511 PYGMP11217 842 aa17.21■□□□□ 0.35
CROCCP3-201ENST00000263511 ALDH9A1P49189 494 aa17.21■□□□□ 0.35
CROCCP3-201ENST00000263511 MRPS6P82932 125 aaKnown RBP17.21■□□□□ 0.35
CROCCP3-201ENST00000263511 AGKQ53H12 422 aa17.21■□□□□ 0.35
CROCCP3-201ENST00000263511 TBC1D23Q9NUY8 699 aa17.21■□□□□ 0.35
CROCCP3-201ENST00000263511 FBXL21Q9UKT6 434 aa17.21■□□□□ 0.35
CROCCP3-201ENST00000263511 GSTM1P09488 218 aa17.2■□□□□ 0.34
CROCCP3-201ENST00000263511 ACADSP16219 412 aa17.2■□□□□ 0.34
CROCCP3-201ENST00000263511 IRAK1BP1Q5VVH5 260 aa17.2■□□□□ 0.34
CROCCP3-201ENST00000263511 REPS1Q96D71 796 aa17.2■□□□□ 0.34
CROCCP3-201ENST00000263511 FUT8Q9BYC5 575 aa17.2■□□□□ 0.34
CROCCP3-201ENST00000263511 CAB39Q9Y376 341 aaPredicted RBP17.2■□□□□ 0.34
CROCCP3-201ENST00000263511 FGF10O15520 208 aaPredicted RBP17.2■□□□□ 0.34
CROCCP3-201ENST00000263511 SERPINE1P05121 402 aa17.2■□□□□ 0.34
CROCCP3-201ENST00000263511 RASA2Q15283 850 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms