RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 OXNAD1Q96HP4 312 aaPredicted RBP17.85■□□□□ 0.45
NOTCH3-201ENST00000263388 SEMA6BQ9H3T3 888 aa17.85■□□□□ 0.45
NOTCH3-201ENST00000263388 PRR23AA6NEV1 266 aa17.85■□□□□ 0.45
NOTCH3-201ENST00000263388 ZNF157P51786 506 aaPredicted RBP17.85■□□□□ 0.45
NOTCH3-201ENST00000263388 DLG3Q92796 817 aa17.85■□□□□ 0.45
NOTCH3-201ENST00000263388 TMEM106CQ9BVX2 250 aa17.85■□□□□ 0.45
NOTCH3-201ENST00000263388 SENP2Q9HC62 589 aa17.85■□□□□ 0.45
NOTCH3-201ENST00000263388 FAM20BO75063 409 aa17.84■□□□□ 0.45
NOTCH3-201ENST00000263388 PAICSP22234 425 aaKnown RBP17.84■□□□□ 0.45
NOTCH3-201ENST00000263388 CSHL1Q14406 222 aa17.84■□□□□ 0.45
NOTCH3-201ENST00000263388 CDKAL1Q5VV42 579 aa17.84■□□□□ 0.45
NOTCH3-201ENST00000263388 SLC25A24Q6NUK1 477 aa17.84■□□□□ 0.45
NOTCH3-201ENST00000263388 KIAA0408Q6ZU52 694 aa17.84■□□□□ 0.45
NOTCH3-201ENST00000263388 GLT1D1Q96MS3 346 aa17.84■□□□□ 0.45
NOTCH3-201ENST00000263388 PIF1Q9H611 641 aa17.84■□□□□ 0.45
NOTCH3-201ENST00000263388 TAS2R13Q9NYV9 303 aa17.84■□□□□ 0.45
NOTCH3-201ENST00000263388 VPS28Q9UK41 221 aa17.84■□□□□ 0.45
NOTCH3-201ENST00000263388 C1orf232A0A0U1RR37 186 aa17.84■□□□□ 0.45
NOTCH3-201ENST00000263388 GLI1P08151 1106 aa17.84■□□□□ 0.45
NOTCH3-201ENST00000263388 PGAM1P18669 254 aa17.84■□□□□ 0.45
NOTCH3-201ENST00000263388 CACNA2D1P54289 1103 aa17.84■□□□□ 0.45
NOTCH3-201ENST00000263388 ZNF614Q8N883 585 aa17.84■□□□□ 0.45
NOTCH3-201ENST00000263388 TPD52L3Q96J77 140 aa17.84■□□□□ 0.45
NOTCH3-201ENST00000263388 MLPHQ9BV36 600 aaPredicted RBP17.84■□□□□ 0.45
NOTCH3-201ENST00000263388 MROH8Q9H579 483 aa17.84■□□□□ 0.45
NOTCH3-201ENST00000263388 NMRAL1Q9HBL8 299 aa17.84■□□□□ 0.45
NOTCH3-201ENST00000263388 H3BMM5 538 aa17.84■□□□□ 0.45
NOTCH3-201ENST00000263388 LDLRP01130 860 aa17.84■□□□□ 0.45
NOTCH3-201ENST00000263388 CARNMT1Q8N4J0 409 aa17.84■□□□□ 0.45
NOTCH3-201ENST00000263388 RXFP2Q8WXD0 754 aa17.84■□□□□ 0.45
NOTCH3-201ENST00000263388 DEFB129Q9H1M3 183 aa17.84■□□□□ 0.45
NOTCH3-201ENST00000263388 GGA3Q9NZ52 723 aa17.84■□□□□ 0.45
NOTCH3-201ENST00000263388 CCL15-CCL14A0A0B4J2E2 113 aa17.84■□□□□ 0.45
NOTCH3-201ENST00000263388 CKMP06732 381 aa17.84■□□□□ 0.45
NOTCH3-201ENST00000263388 ABCB1P08183 1280 aaPredicted RBP17.84■□□□□ 0.45
NOTCH3-201ENST00000263388 PTPN11Q06124 597 aaPredicted RBP17.84■□□□□ 0.45
NOTCH3-201ENST00000263388 CCL15Q16663 113 aa17.84■□□□□ 0.45
NOTCH3-201ENST00000263388 EPHX4Q8IUS5 362 aa17.84■□□□□ 0.45
NOTCH3-201ENST00000263388 CCDC3Q9BQI4 270 aa17.84■□□□□ 0.45
NOTCH3-201ENST00000263388 TRHDEQ9UKU6 1024 aa17.84■□□□□ 0.45
NOTCH3-201ENST00000263388 LINC00854A0A1B0GVQ3 168 aa17.84■□□□□ 0.45
NOTCH3-201ENST00000263388 CPSF4O95639 269 aaKnown RBP17.84■□□□□ 0.45
NOTCH3-201ENST00000263388 RPN2P04844 631 aa17.84■□□□□ 0.45
NOTCH3-201ENST00000263388 EPS8Q12929 822 aa17.84■□□□□ 0.45
NOTCH3-201ENST00000263388 FIG4Q92562 907 aa17.84■□□□□ 0.45
NOTCH3-201ENST00000263388 TRPC4Q9UBN4 977 aa17.84■□□□□ 0.45
NOTCH3-201ENST00000263388 A0A087X1B8 175 aa17.84■□□□□ 0.45
NOTCH3-201ENST00000263388 C15orf38-AP3S2A0A0A6YYH1 394 aa17.84■□□□□ 0.45
NOTCH3-201ENST00000263388 DGUOKQ16854 277 aa17.84■□□□□ 0.45
NOTCH3-201ENST00000263388 ARPINQ7Z6K5 226 aa17.84■□□□□ 0.45
NOTCH3-201ENST00000263388 MIB1Q86YT6 1006 aa17.84■□□□□ 0.45
NOTCH3-201ENST00000263388 AGBL3Q8NEM8 1001 aa17.84■□□□□ 0.45
NOTCH3-201ENST00000263388 LMTK2Q8IWU2 1503 aa17.84■□□□□ 0.45
NOTCH3-201ENST00000263388 EFCAB10A6NFE3 127 aa17.84■□□□□ 0.45
NOTCH3-201ENST00000263388 HACD1B0YJ81 288 aa17.84■□□□□ 0.45
NOTCH3-201ENST00000263388 TBC1D12O60347 775 aa17.84■□□□□ 0.45
NOTCH3-201ENST00000263388 CNPP09543 421 aaKnown RBP17.84■□□□□ 0.45
NOTCH3-201ENST00000263388 TGFB3P10600 412 aa17.84■□□□□ 0.45
NOTCH3-201ENST00000263388 PSMB9P28065 219 aa17.84■□□□□ 0.45
NOTCH3-201ENST00000263388 GPRC5CQ9NQ84 441 aa17.84■□□□□ 0.45
NOTCH3-201ENST00000263388 RABGEF1Q9UJ41 708 aa17.84■□□□□ 0.45
NOTCH3-201ENST00000263388 RFX3P48380 749 aa17.83■□□□□ 0.45
NOTCH3-201ENST00000263388 CASP4P49662 377 aa17.83■□□□□ 0.45
NOTCH3-201ENST00000263388 NFE2Q16621 373 aaPredicted RBP17.83■□□□□ 0.45
NOTCH3-201ENST00000263388 DGKKQ5KSL6 1271 aa17.83■□□□□ 0.45
NOTCH3-201ENST00000263388 YWHAQP27348 245 aa17.83■□□□□ 0.45
NOTCH3-201ENST00000263388 YWHAZP63104 245 aaKnown RBP17.83■□□□□ 0.45
NOTCH3-201ENST00000263388 TIMM50Q3ZCQ8 353 aa17.83■□□□□ 0.45
NOTCH3-201ENST00000263388 N4BP2L1Q5TBK1 243 aaPredicted RBP17.83■□□□□ 0.45
NOTCH3-201ENST00000263388 RIPOR1Q6ZS17 1223 aa17.83■□□□□ 0.45
NOTCH3-201ENST00000263388 NT5DC4Q86YG4 428 aa17.83■□□□□ 0.45
NOTCH3-201ENST00000263388 FICDQ9BVA6 458 aa17.83■□□□□ 0.45
NOTCH3-201ENST00000263388 ZCCHC2Q9C0B9 1178 aaKnown RBP17.83■□□□□ 0.45
NOTCH3-201ENST00000263388 FBXO39Q8N4B4 442 aa17.83■□□□□ 0.44
NOTCH3-201ENST00000263388 PHF21BQ96EK2 531 aa17.83■□□□□ 0.44
NOTCH3-201ENST00000263388 CROTQ9UKG9 612 aa17.83■□□□□ 0.44
NOTCH3-201ENST00000263388 PTPRUQ92729 1446 aa17.83■□□□□ 0.44
NOTCH3-201ENST00000263388 XRCC4Q13426 336 aa17.83■□□□□ 0.44
NOTCH3-201ENST00000263388 PEG10Q86TG7 708 aaKnown RBP17.83■□□□□ 0.44
NOTCH3-201ENST00000263388 ITIH5Q86UX2 942 aa17.83■□□□□ 0.44
NOTCH3-201ENST00000263388 EXOC3L1Q86VI1 746 aa17.83■□□□□ 0.44
NOTCH3-201ENST00000263388 TCP10LQ8TDR4 215 aa17.83■□□□□ 0.44
NOTCH3-201ENST00000263388 KAT2BQ92831 832 aa17.83■□□□□ 0.44
NOTCH3-201ENST00000263388 POP1Q99575 1024 aaKnown RBP17.83■□□□□ 0.44
NOTCH3-201ENST00000263388 EPB41L4BQ9H329 900 aa17.83■□□□□ 0.44
NOTCH3-201ENST00000263388 SMNDC1O75940 238 aaKnown RBP eCLIP17.83■□□□□ 0.44
NOTCH3-201ENST00000263388 AKAP3O75969 853 aa17.83■□□□□ 0.44
NOTCH3-201ENST00000263388 FAM228AQ86W67 206 aa17.83■□□□□ 0.44
NOTCH3-201ENST00000263388 ENTPD7Q9NQZ7 604 aa17.83■□□□□ 0.44
NOTCH3-201ENST00000263388 NFICP08651 508 aa17.83■□□□□ 0.44
NOTCH3-201ENST00000263388 MSH3P20585 1137 aa17.83■□□□□ 0.44
NOTCH3-201ENST00000263388 GP5P40197 560 aa17.83■□□□□ 0.44
NOTCH3-201ENST00000263388 SKP1P63208 163 aa17.83■□□□□ 0.44
NOTCH3-201ENST00000263388 MARC1Q5VT66 337 aa17.83■□□□□ 0.44
NOTCH3-201ENST00000263388 YY1P25490 414 aa17.83■□□□□ 0.44
NOTCH3-201ENST00000263388 DSG3P32926 999 aa17.83■□□□□ 0.44
NOTCH3-201ENST00000263388 NT5DC1Q5TFE4 455 aa17.83■□□□□ 0.44
NOTCH3-201ENST00000263388 FAM136AQ96C01 138 aa17.83■□□□□ 0.44
NOTCH3-201ENST00000263388 PLA2G4CQ9UP65 541 aa17.83■□□□□ 0.44
NOTCH3-201ENST00000263388 TRIM43BA6NCK2 446 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms