RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 ZSCAN32Q9NX65 697 aa8.46□□□□□ -1.06
PTPN3-201ENST00000262539 UBA6A0AVT1 1052 aaPredicted RBP8.46□□□□□ -1.06
PTPN3-201ENST00000262539 H3BQF6 201 aa8.46□□□□□ -1.06
PTPN3-201ENST00000262539 LRG1P02750 347 aa8.46□□□□□ -1.06
PTPN3-201ENST00000262539 GHRP10912 638 aa8.46□□□□□ -1.06
PTPN3-201ENST00000262539 LSP1P33241 339 aa8.46□□□□□ -1.06
PTPN3-201ENST00000262539 CENPAP49450 140 aa8.46□□□□□ -1.06
PTPN3-201ENST00000262539 ATXN3P54252 364 aaPredicted RBP8.46□□□□□ -1.06
PTPN3-201ENST00000262539 DAOAP59103 153 aa8.46□□□□□ -1.06
PTPN3-201ENST00000262539 ART3Q13508 389 aa8.46□□□□□ -1.06
PTPN3-201ENST00000262539 DCAF6Q58WW2 860 aa8.46□□□□□ -1.06
PTPN3-201ENST00000262539 CDR2LQ86X02 465 aaPredicted RBP8.46□□□□□ -1.06
PTPN3-201ENST00000262539 ATPAF2Q8N5M1 289 aa8.46□□□□□ -1.06
PTPN3-201ENST00000262539 SLC26A7Q8TE54 656 aa8.46□□□□□ -1.06
PTPN3-201ENST00000262539 CCDC138Q96M89 665 aa8.46□□□□□ -1.06
PTPN3-201ENST00000262539 IGSF9Q9P2J2 1179 aa8.46□□□□□ -1.06
PTPN3-201ENST00000262539 GJD2Q9UKL4 321 aa8.46□□□□□ -1.06
PTPN3-201ENST00000262539 GCATO75600 419 aa8.45□□□□□ -1.06
PTPN3-201ENST00000262539 C1RP00736 705 aa8.45□□□□□ -1.06
PTPN3-201ENST00000262539 ALADP13716 330 aa8.45□□□□□ -1.06
PTPN3-201ENST00000262539 IRX1P78414 480 aaPredicted RBP8.45□□□□□ -1.06
PTPN3-201ENST00000262539 ITIH4Q14624 930 aa8.45□□□□□ -1.06
PTPN3-201ENST00000262539 SPDYAQ5MJ70 313 aa8.45□□□□□ -1.06
PTPN3-201ENST00000262539 KHDRBS2Q5VWX1 349 aaKnown RBP8.45□□□□□ -1.06
PTPN3-201ENST00000262539 TLCD1Q96CP7 247 aa8.45□□□□□ -1.06
PTPN3-201ENST00000262539 SNRNP25Q9BV90 132 aaKnown RBP8.45□□□□□ -1.06
PTPN3-201ENST00000262539 WWP1Q9H0M0 922 aa8.45□□□□□ -1.06
PTPN3-201ENST00000262539 NRDE2Q9H7Z3 1164 aa8.45□□□□□ -1.06
PTPN3-201ENST00000262539 C2CD2LO14523 706 aa8.45□□□□□ -1.06
PTPN3-201ENST00000262539 MYO1DO94832 1006 aa8.45□□□□□ -1.06
PTPN3-201ENST00000262539 ACSL3O95573 720 aa8.45□□□□□ -1.06
PTPN3-201ENST00000262539 PECAM1P16284 738 aaPredicted RBP8.45□□□□□ -1.06
PTPN3-201ENST00000262539 NCF2P19878 526 aaPredicted RBP8.45□□□□□ -1.06
PTPN3-201ENST00000262539 RPL34P49207 117 aaKnown RBP8.45□□□□□ -1.06
PTPN3-201ENST00000262539 INSCQ1MX18 579 aa8.45□□□□□ -1.06
PTPN3-201ENST00000262539 SPDYE7PQ495Y7 208 aa8.45□□□□□ -1.06
PTPN3-201ENST00000262539 SLC9A4Q6AI14 798 aa8.45□□□□□ -1.06
PTPN3-201ENST00000262539 ANKLE1Q8NAG6 615 aa8.45□□□□□ -1.06
PTPN3-201ENST00000262539 LEMD2Q8NC56 503 aa8.45□□□□□ -1.06
PTPN3-201ENST00000262539 CEP19Q96LK0 163 aa8.45□□□□□ -1.06
PTPN3-201ENST00000262539 NPY6RQ99463 290 aa8.45□□□□□ -1.06
PTPN3-201ENST00000262539 SENP6Q9GZR1 1112 aaPredicted RBP8.45□□□□□ -1.06
PTPN3-201ENST00000262539 AJAP1Q9UKB5 411 aaPredicted RBP8.45□□□□□ -1.06
PTPN3-201ENST00000262539 SLCO1B7G3V0H7 640 aa8.45□□□□□ -1.06
PTPN3-201ENST00000262539 PAPSS1O43252 624 aaPredicted RBP8.45□□□□□ -1.06
PTPN3-201ENST00000262539 LCP1P13796 627 aa8.45□□□□□ -1.06
PTPN3-201ENST00000262539 CYP2F1P24903 491 aa8.45□□□□□ -1.06
PTPN3-201ENST00000262539 EPHB2P29323 1055 aa8.45□□□□□ -1.06
PTPN3-201ENST00000262539 CTCFP49711 727 aaPredicted RBP8.45□□□□□ -1.06
PTPN3-201ENST00000262539 NRG1Q02297 640 aaPredicted RBP8.45□□□□□ -1.06
PTPN3-201ENST00000262539 RING1Q06587 406 aa8.45□□□□□ -1.06
PTPN3-201ENST00000262539 SOWAHAQ2M3V2 549 aa8.45□□□□□ -1.06
PTPN3-201ENST00000262539 CTXN3Q4LDR2 81 aa8.45□□□□□ -1.06
PTPN3-201ENST00000262539 SEZ6Q53EL9 994 aa8.45□□□□□ -1.06
PTPN3-201ENST00000262539 AARS2Q5JTZ9 985 aaKnown RBP8.45□□□□□ -1.06
PTPN3-201ENST00000262539 RETSATQ6NUM9 610 aa8.45□□□□□ -1.06
PTPN3-201ENST00000262539 SETD3Q86TU7 594 aaPredicted RBP8.45□□□□□ -1.06
PTPN3-201ENST00000262539 RMDN1Q96DB5 314 aa8.45□□□□□ -1.06
PTPN3-201ENST00000262539 PPP1R10Q96QC0 940 aaKnown RBP8.45□□□□□ -1.06
PTPN3-201ENST00000262539 TLR8Q9NR97 1041 aaKnown RBP8.45□□□□□ -1.06
PTPN3-201ENST00000262539 APOBEC2Q9Y235 224 aaKnown RBP8.45□□□□□ -1.06
PTPN3-201ENST00000262539 HBS1LQ9Y450 684 aaKnown RBP8.45□□□□□ -1.06
PTPN3-201ENST00000262539 TREHO43280 583 aa8.45□□□□□ -1.06
PTPN3-201ENST00000262539 CCDC22O60826 627 aa8.45□□□□□ -1.06
PTPN3-201ENST00000262539 MAP4P27816 1152 aaKnown RBP8.45□□□□□ -1.06
PTPN3-201ENST00000262539 MAPKAPK2P49137 400 aa8.45□□□□□ -1.06
PTPN3-201ENST00000262539 ALDH7A1P49419 539 aaKnown RBP8.45□□□□□ -1.06
PTPN3-201ENST00000262539 RALGPS1Q5JS13 557 aa8.45□□□□□ -1.06
PTPN3-201ENST00000262539 TAGAPQ8N103 731 aa8.45□□□□□ -1.06
PTPN3-201ENST00000262539 UBE2OQ9C0C9 1292 aaKnown RBP8.45□□□□□ -1.06
PTPN3-201ENST00000262539 MUC3BQ9H195 1237 aa8.45□□□□□ -1.06
PTPN3-201ENST00000262539 NXF3Q9H4D5 531 aaKnown RBP8.45□□□□□ -1.06
PTPN3-201ENST00000262539 STN1Q9H668 368 aaKnown RBP8.45□□□□□ -1.06
PTPN3-201ENST00000262539 WDCPQ9H6R7 721 aa8.45□□□□□ -1.06
PTPN3-201ENST00000262539 CHST7Q9NS84 486 aa8.45□□□□□ -1.06
PTPN3-201ENST00000262539 RWDD3Q9Y3V2 267 aa8.45□□□□□ -1.06
PTPN3-201ENST00000262539 MYH6P13533 1939 aa8.45□□□□□ -1.06
PTPN3-201ENST00000262539 SCN9AQ15858 1988 aa8.45□□□□□ -1.06
PTPN3-201ENST00000262539 EIF4E1BA6NMX2 242 aaKnown RBP8.45□□□□□ -1.06
PTPN3-201ENST00000262539 GABRDO14764 452 aa8.45□□□□□ -1.06
PTPN3-201ENST00000262539 MEFVO15553 781 aaPredicted RBP8.45□□□□□ -1.06
PTPN3-201ENST00000262539 GLRA3O75311 464 aa8.45□□□□□ -1.06
PTPN3-201ENST00000262539 RGS7P49802 495 aa8.45□□□□□ -1.06
PTPN3-201ENST00000262539 QKIQ96PU8 341 aaKnown RBP eCLIP8.45□□□□□ -1.06
PTPN3-201ENST00000262539 TACO1Q9BSH4 297 aaKnown RBP8.45□□□□□ -1.06
PTPN3-201ENST00000262539 SIK2Q9H0K1 926 aa8.45□□□□□ -1.06
PTPN3-201ENST00000262539 CORO1CQ9ULV4 474 aaPredicted RBP8.45□□□□□ -1.06
PTPN3-201ENST00000262539 SOBPA7XYQ1 873 aa8.44□□□□□ -1.06
PTPN3-201ENST00000262539 ARVCFO00192 962 aa8.44□□□□□ -1.06
PTPN3-201ENST00000262539 SASH3O75995 380 aa8.44□□□□□ -1.06
PTPN3-201ENST00000262539 GP5P40197 560 aa8.44□□□□□ -1.06
PTPN3-201ENST00000262539 KCNJ1P48048 391 aa8.44□□□□□ -1.06
PTPN3-201ENST00000262539 CDK18Q07002 472 aa8.44□□□□□ -1.06
PTPN3-201ENST00000262539 DPYSL3Q14195 570 aa8.44□□□□□ -1.06
PTPN3-201ENST00000262539 ZNF235Q14590 738 aa8.44□□□□□ -1.06
PTPN3-201ENST00000262539 RNASEH2BQ5TBB1 312 aaKnown RBP8.44□□□□□ -1.06
PTPN3-201ENST00000262539 FAM180AQ6UWF9 173 aa8.44□□□□□ -1.06
PTPN3-201ENST00000262539 ZNF599Q96NL3 588 aa8.44□□□□□ -1.06
PTPN3-201ENST00000262539 ULBP1Q9BZM6 244 aa8.44□□□□□ -1.06
PTPN3-201ENST00000262539 TFR2Q9UP52 801 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms