RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 BORAQ6PGQ7 559 aa11.12□□□□□ -0.63
CHRNA1-201ENST00000261007 C1orf228Q6PIY5 440 aa11.12□□□□□ -0.63
CHRNA1-201ENST00000261007 TMEM126BQ8IUX1 230 aa11.12□□□□□ -0.63
CHRNA1-201ENST00000261007 NUDCD3Q8IVD9 361 aa11.12□□□□□ -0.63
CHRNA1-201ENST00000261007 CMASQ8NFW8 434 aaPredicted RBP11.12□□□□□ -0.63
CHRNA1-201ENST00000261007 HAUS1Q96CS2 278 aa11.12□□□□□ -0.63
CHRNA1-201ENST00000261007 ZNF560Q96MR9 790 aa11.12□□□□□ -0.63
CHRNA1-201ENST00000261007 RILPQ96NA2 401 aa11.12□□□□□ -0.63
CHRNA1-201ENST00000261007 TWNKQ96RR1 684 aa11.12□□□□□ -0.63
CHRNA1-201ENST00000261007 PPP1R16BQ96T49 567 aa11.12□□□□□ -0.63
CHRNA1-201ENST00000261007 MRPS26Q9BYN8 205 aaKnown RBP11.12□□□□□ -0.63
CHRNA1-201ENST00000261007 FRMD8Q9BZ67 464 aaPredicted RBP11.12□□□□□ -0.63
CHRNA1-201ENST00000261007 HESX1Q9UBX0 185 aa11.12□□□□□ -0.63
CHRNA1-201ENST00000261007 CYTH4Q9UIA0 394 aa11.12□□□□□ -0.63
CHRNA1-201ENST00000261007 UBQLN1Q9UMX0 589 aaKnown RBP11.12□□□□□ -0.63
CHRNA1-201ENST00000261007 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.12□□□□□ -0.63
CHRNA1-201ENST00000261007 TEX264Q9Y6I9 313 aa11.12□□□□□ -0.63
CHRNA1-201ENST00000261007 ARHGAP10A1A4S6 786 aa11.12□□□□□ -0.63
CHRNA1-201ENST00000261007 C3orf70A6NLC5 250 aaPredicted RBP11.12□□□□□ -0.63
CHRNA1-201ENST00000261007 DPYSL4O14531 572 aa11.12□□□□□ -0.63
CHRNA1-201ENST00000261007 TRDMT1O14717 391 aaKnown RBP11.12□□□□□ -0.63
CHRNA1-201ENST00000261007 GPR32O75388 356 aa11.12□□□□□ -0.63
CHRNA1-201ENST00000261007 TMEM63AO94886 807 aa11.12□□□□□ -0.63
CHRNA1-201ENST00000261007 CLPTM1O96005 669 aa11.12□□□□□ -0.63
CHRNA1-201ENST00000261007 TFAP2AP05549 437 aa11.12□□□□□ -0.63
CHRNA1-201ENST00000261007 SMIM10L2AP0DMW4 78 aa11.12□□□□□ -0.63
CHRNA1-201ENST00000261007 SMIM10L2BP0DMW5 78 aa11.12□□□□□ -0.63
CHRNA1-201ENST00000261007 MYL4P12829 197 aa11.12□□□□□ -0.63
CHRNA1-201ENST00000261007 DARSP14868 501 aaKnown RBP11.12□□□□□ -0.63
CHRNA1-201ENST00000261007 SCNN1AP37088 669 aa11.12□□□□□ -0.63
CHRNA1-201ENST00000261007 ELK3P41970 407 aa11.12□□□□□ -0.63
CHRNA1-201ENST00000261007 CPT1AP50416 773 aa11.12□□□□□ -0.63
CHRNA1-201ENST00000261007 OTUD4Q01804 1114 aaKnown RBP11.12□□□□□ -0.63
CHRNA1-201ENST00000261007 FOLH1Q04609 750 aa11.12□□□□□ -0.63
CHRNA1-201ENST00000261007 TFDP2Q14188 446 aa11.12□□□□□ -0.63
CHRNA1-201ENST00000261007 CHI3L2Q15782 390 aa11.12□□□□□ -0.63
CHRNA1-201ENST00000261007 ADRM1Q16186 407 aa11.12□□□□□ -0.63
CHRNA1-201ENST00000261007 FAM47CQ5HY64 1035 aa11.12□□□□□ -0.63
CHRNA1-201ENST00000261007 MORN1Q5T089 497 aa11.12□□□□□ -0.63
CHRNA1-201ENST00000261007 FAM102AQ5T9C2 384 aaPredicted RBP11.12□□□□□ -0.63
CHRNA1-201ENST00000261007 LPCAT4Q643R3 524 aa11.12□□□□□ -0.63
CHRNA1-201ENST00000261007 MAP7D3Q8IWC1 876 aa11.12□□□□□ -0.63
CHRNA1-201ENST00000261007 CCDC33Q8N5R6 958 aa11.12□□□□□ -0.63
CHRNA1-201ENST00000261007 JOSD2Q8TAC2 188 aa11.12□□□□□ -0.63
CHRNA1-201ENST00000261007 NPLOC4Q8TAT6 608 aa11.12□□□□□ -0.63
CHRNA1-201ENST00000261007 ACTL9Q8TC94 416 aa11.12□□□□□ -0.63
CHRNA1-201ENST00000261007 SLC26A7Q8TE54 656 aa11.12□□□□□ -0.63
CHRNA1-201ENST00000261007 DDI1Q8WTU0 396 aa11.12□□□□□ -0.63
CHRNA1-201ENST00000261007 PYDC1Q8WXC3 89 aa11.12□□□□□ -0.63
CHRNA1-201ENST00000261007 USP6NLQ92738 828 aa11.12□□□□□ -0.63
CHRNA1-201ENST00000261007 SETD4Q9NVD3 440 aa11.12□□□□□ -0.63
CHRNA1-201ENST00000261007 THAP1Q9NVV9 213 aa11.12□□□□□ -0.63
CHRNA1-201ENST00000261007 THEGQ9P2T0 379 aa11.12□□□□□ -0.63
CHRNA1-201ENST00000261007 RAB26Q9ULW5 256 aa11.12□□□□□ -0.63
CHRNA1-201ENST00000261007 G3BP2Q9UN86 482 aaKnown RBP11.12□□□□□ -0.63
CHRNA1-201ENST00000261007 DMTF1Q9Y222 760 aa11.12□□□□□ -0.63
CHRNA1-201ENST00000261007 GNEQ9Y223 722 aaKnown RBP11.12□□□□□ -0.63
CHRNA1-201ENST00000261007 C15orf38-AP3S2A0A0A6YYH1 394 aa11.11□□□□□ -0.63
CHRNA1-201ENST00000261007 TRIM49D1C9J1S8 452 aa11.11□□□□□ -0.63
CHRNA1-201ENST00000261007 APOC4-APOC2K7ER74 178 aa11.11□□□□□ -0.63
CHRNA1-201ENST00000261007 APOC2P02655 101 aa11.11□□□□□ -0.63
CHRNA1-201ENST00000261007 BPGMP07738 259 aa11.11□□□□□ -0.63
CHRNA1-201ENST00000261007 C6orf222P0C671 652 aaPredicted RBP11.11□□□□□ -0.63
CHRNA1-201ENST00000261007 CYP2C9P11712 490 aa11.11□□□□□ -0.63
CHRNA1-201ENST00000261007 TCF4P15884 667 aa11.11□□□□□ -0.63
CHRNA1-201ENST00000261007 ACAT1P24752 427 aaKnown RBP11.11□□□□□ -0.63
CHRNA1-201ENST00000261007 TPP2P29144 1249 aaPredicted RBP11.11□□□□□ -0.63
CHRNA1-201ENST00000261007 FDFT1P37268 417 aa11.11□□□□□ -0.63
CHRNA1-201ENST00000261007 SCNN1BP51168 640 aa11.11□□□□□ -0.63
CHRNA1-201ENST00000261007 CREB5Q02930 508 aa11.11□□□□□ -0.63
CHRNA1-201ENST00000261007 DEUP1Q05D60 604 aa11.11□□□□□ -0.63
CHRNA1-201ENST00000261007 STX3Q13277 289 aa11.11□□□□□ -0.63
CHRNA1-201ENST00000261007 PDK2Q15119 407 aa11.11□□□□□ -0.63
CHRNA1-201ENST00000261007 ZBTB6Q15916 424 aa11.11□□□□□ -0.63
CHRNA1-201ENST00000261007 KIZQ2M2Z5 673 aa11.11□□□□□ -0.63
CHRNA1-201ENST00000261007 USP41Q3LFD5 358 aa11.11□□□□□ -0.63
CHRNA1-201ENST00000261007 MDH1BQ5I0G3 518 aa11.11□□□□□ -0.63
CHRNA1-201ENST00000261007 STXBP5Q5T5C0 1151 aa11.11□□□□□ -0.63
CHRNA1-201ENST00000261007 ARHGAP17Q68EM7 881 aa11.11□□□□□ -0.63
CHRNA1-201ENST00000261007 RBM44Q6ZP01 1051 aaKnown RBP11.11□□□□□ -0.63
CHRNA1-201ENST00000261007 CDHR3Q6ZTQ4 885 aa11.11□□□□□ -0.63
CHRNA1-201ENST00000261007 ARPINQ7Z6K5 226 aa11.11□□□□□ -0.63
CHRNA1-201ENST00000261007 WDR75Q8IWA0 830 aaKnown RBP11.11□□□□□ -0.63
CHRNA1-201ENST00000261007 AHI1Q8N157 1196 aa11.11□□□□□ -0.63
CHRNA1-201ENST00000261007 SLC25A41Q8N5S1 370 aa11.11□□□□□ -0.63
CHRNA1-201ENST00000261007 KCTD6Q8NC69 237 aa11.11□□□□□ -0.63
CHRNA1-201ENST00000261007 DIS3LQ8TF46 1054 aaKnown RBP11.11□□□□□ -0.63
CHRNA1-201ENST00000261007 TBCBQ99426 244 aa11.11□□□□□ -0.63
CHRNA1-201ENST00000261007 RBM38Q9H0Z9 239 aaKnown RBP11.11□□□□□ -0.63
CHRNA1-201ENST00000261007 USP29Q9HBJ7 922 aa11.11□□□□□ -0.63
CHRNA1-201ENST00000261007 C6orf203Q9P0P8 240 aaPredicted RBP11.11□□□□□ -0.63
CHRNA1-201ENST00000261007 HMGXB4Q9UGU5 601 aa11.11□□□□□ -0.63
CHRNA1-201ENST00000261007 TSPAN16Q9UKR8 245 aa11.11□□□□□ -0.63
CHRNA1-201ENST00000261007 PADI4Q9UM07 663 aa11.11□□□□□ -0.63
CHRNA1-201ENST00000261007 USP18Q9UMW8 372 aa11.11□□□□□ -0.63
CHRNA1-201ENST00000261007 CHMP2BQ9UQN3 213 aa11.11□□□□□ -0.63
CHRNA1-201ENST00000261007 A0A0J9YVX5 310 aa11.1□□□□□ -0.63
CHRNA1-201ENST00000261007 TCRBV7S3A2A0A539 114 aa11.1□□□□□ -0.63
CHRNA1-201ENST00000261007 ZNF487B1APH4 448 aa11.1□□□□□ -0.63
CHRNA1-201ENST00000261007 KBTBD13C9JR72 458 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms