RNA–Protein interactions for RNA: ENST00000259951.11

HLA-F-216, Transcript of major histocompatibility complex, class I, F, humanhuman

APPRIS P4 BASIC

Gene HLA-F, Length 1,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-216ENST00000259951 SNF8Q96H20 258 aa17.28■□□□□ 0.36
HLA-F-216ENST00000259951 PBX4Q9BYU1 374 aa17.28■□□□□ 0.36
HLA-F-216ENST00000259951 PCDH9Q9HC56 1237 aa17.28■□□□□ 0.36
HLA-F-216ENST00000259951 SNX24Q9Y343 169 aa17.28■□□□□ 0.36
HLA-F-216ENST00000259951 HS3ST4Q9Y661 456 aa17.28■□□□□ 0.36
HLA-F-216ENST00000259951 SZT2Q5T011 3432 aa17.27■□□□□ 0.36
HLA-F-216ENST00000259951 PPP1R12AO14974 1030 aaPredicted RBP17.27■□□□□ 0.36
HLA-F-216ENST00000259951 CLASP2O75122 1294 aaKnown RBP17.27■□□□□ 0.36
HLA-F-216ENST00000259951 HNRNPA1P09651 372 aaKnown RBP eCLIP17.27■□□□□ 0.36
HLA-F-216ENST00000259951 SRGAP2BP0DMP2 458 aa17.27■□□□□ 0.36
HLA-F-216ENST00000259951 PFKLP17858 780 aa17.27■□□□□ 0.36
HLA-F-216ENST00000259951 ITIH2P19823 946 aa17.27■□□□□ 0.36
HLA-F-216ENST00000259951 HOXC13P31276 330 aa17.27■□□□□ 0.36
HLA-F-216ENST00000259951 IRS1P35568 1242 aa17.27■□□□□ 0.36
HLA-F-216ENST00000259951 ACTN2P35609 894 aa17.27■□□□□ 0.36
HLA-F-216ENST00000259951 RPL21P46778 160 aaKnown RBP17.27■□□□□ 0.36
HLA-F-216ENST00000259951 HARS2P49590 506 aaKnown RBP17.27■□□□□ 0.36
HLA-F-216ENST00000259951 CAV1Q03135 178 aa17.27■□□□□ 0.36
HLA-F-216ENST00000259951 PDK1Q15118 436 aa17.27■□□□□ 0.36
HLA-F-216ENST00000259951 MANEALQ5VSG8 457 aa17.27■□□□□ 0.36
HLA-F-216ENST00000259951 PPP2R2DQ66LE6 453 aa17.27■□□□□ 0.36
HLA-F-216ENST00000259951 RWDD4Q6NW29 188 aaKnown RBP17.27■□□□□ 0.36
HLA-F-216ENST00000259951 AENQ8WTP8 325 aaKnown RBP17.27■□□□□ 0.36
HLA-F-216ENST00000259951 LRRC45Q96CN5 670 aa17.27■□□□□ 0.36
HLA-F-216ENST00000259951 BRD8Q9H0E9 1235 aa17.27■□□□□ 0.36
HLA-F-216ENST00000259951 IL21Q9HBE4 155 aa17.27■□□□□ 0.36
HLA-F-216ENST00000259951 ZNF334Q9HCZ1 680 aaPredicted RBP17.27■□□□□ 0.36
HLA-F-216ENST00000259951 MAN1C1Q9NR34 630 aa17.27■□□□□ 0.36
HLA-F-216ENST00000259951 ASAH2Q9NR71 780 aa17.27■□□□□ 0.36
HLA-F-216ENST00000259951 ETNK2Q9NVF9 386 aa17.27■□□□□ 0.36
HLA-F-216ENST00000259951 DTLQ9NZJ0 730 aa17.27■□□□□ 0.36
HLA-F-216ENST00000259951 DOCK4Q8N1I0 1966 aa17.26■□□□□ 0.35
HLA-F-216ENST00000259951 E9PAM4 449 aa17.26■□□□□ 0.35
HLA-F-216ENST00000259951 IFNB1P01574 187 aa17.26■□□□□ 0.35
HLA-F-216ENST00000259951 HMBSP08397 361 aa17.26■□□□□ 0.35
HLA-F-216ENST00000259951 MX2P20592 715 aa17.26■□□□□ 0.35
HLA-F-216ENST00000259951 GABRR2P28476 465 aa17.26■□□□□ 0.35
HLA-F-216ENST00000259951 PBX2P40425 430 aa17.26■□□□□ 0.35
HLA-F-216ENST00000259951 SLC11A2P49281 568 aa17.26■□□□□ 0.35
HLA-F-216ENST00000259951 SLC45A4Q5BKX6 768 aa17.26■□□□□ 0.35
HLA-F-216ENST00000259951 BEND6Q5SZJ8 279 aaPredicted RBP17.26■□□□□ 0.35
HLA-F-216ENST00000259951 TMEM150AQ86TG1 271 aa17.26■□□□□ 0.35
HLA-F-216ENST00000259951 DDX42Q86XP3 938 aaKnown RBP eCLIP17.26■□□□□ 0.35
HLA-F-216ENST00000259951 LZTR1Q8N653 840 aa17.26■□□□□ 0.35
HLA-F-216ENST00000259951 AZIN2Q96A70 460 aa17.26■□□□□ 0.35
HLA-F-216ENST00000259951 QKIQ96PU8 341 aaKnown RBP eCLIP17.26■□□□□ 0.35
HLA-F-216ENST00000259951 NKX2-4Q9H2Z4 354 aa17.26■□□□□ 0.35
HLA-F-216ENST00000259951 SLC28A3Q9HAS3 691 aa17.26■□□□□ 0.35
HLA-F-216ENST00000259951 PPARGC1AQ9UBK2 798 aaKnown RBP17.26■□□□□ 0.35
HLA-F-216ENST00000259951 MTRF1LQ9UGC7 380 aaKnown RBP17.26■□□□□ 0.35
HLA-F-216ENST00000259951 SNX10Q9Y5X0 201 aa17.26■□□□□ 0.35
HLA-F-216ENST00000259951 MFSD11O43934 449 aa17.25■□□□□ 0.35
HLA-F-216ENST00000259951 XYLBO75191 536 aa17.25■□□□□ 0.35
HLA-F-216ENST00000259951 MYBL2P10244 700 aa17.25■□□□□ 0.35
HLA-F-216ENST00000259951 SLC10A2Q12908 348 aaPredicted RBP17.25■□□□□ 0.35
HLA-F-216ENST00000259951 TRADDQ15628 312 aa17.25■□□□□ 0.35
HLA-F-216ENST00000259951 TRIP13Q15645 432 aaPredicted RBP17.25■□□□□ 0.35
HLA-F-216ENST00000259951 MS4A13Q5J8X5 152 aa17.25■□□□□ 0.35
HLA-F-216ENST00000259951 PIK3R6Q5UE93 754 aa17.25■□□□□ 0.35
HLA-F-216ENST00000259951 C4orf22Q6V702 233 aa17.25■□□□□ 0.35
HLA-F-216ENST00000259951 TMC8Q8IU68 726 aa17.25■□□□□ 0.35
HLA-F-216ENST00000259951 LEMD2Q8NC56 503 aa17.25■□□□□ 0.35
HLA-F-216ENST00000259951 SLC22A17Q8WUG5 538 aa17.25■□□□□ 0.35
HLA-F-216ENST00000259951 TFB1MQ8WVM0 346 aaKnown RBP17.25■□□□□ 0.35
HLA-F-216ENST00000259951 CAVIN3Q969G5 261 aa17.25■□□□□ 0.35
HLA-F-216ENST00000259951 OLFM3Q96PB7 478 aa17.25■□□□□ 0.35
HLA-F-216ENST00000259951 C2orf78A6NCI8 922 aa17.25■□□□□ 0.35
HLA-F-216ENST00000259951 CCL16O15467 120 aa17.25■□□□□ 0.35
HLA-F-216ENST00000259951 MBL2P11226 248 aaPredicted RBP17.25■□□□□ 0.35
HLA-F-216ENST00000259951 PTPN2P17706 415 aa17.25■□□□□ 0.35
HLA-F-216ENST00000259951 BMP8BP34820 402 aa17.25■□□□□ 0.35
HLA-F-216ENST00000259951 AUHQ13825 339 aaKnown RBP17.25■□□□□ 0.35
HLA-F-216ENST00000259951 PCGF5Q86SE9 256 aa17.25■□□□□ 0.35
HLA-F-216ENST00000259951 GSPT2Q8IYD1 628 aaKnown RBP17.25■□□□□ 0.35
HLA-F-216ENST00000259951 FAM71DQ8N9W8 422 aa17.25■□□□□ 0.35
HLA-F-216ENST00000259951 RTP4Q96DX8 246 aa17.25■□□□□ 0.35
HLA-F-216ENST00000259951 FMO2Q99518 471 aa17.25■□□□□ 0.35
HLA-F-216ENST00000259951 DDX50Q9BQ39 737 aaKnown RBP17.25■□□□□ 0.35
HLA-F-216ENST00000259951 CORO1BQ9BR76 489 aa17.25■□□□□ 0.35
HLA-F-216ENST00000259951 KLF16Q9BXK1 252 aaPredicted RBP17.25■□□□□ 0.35
HLA-F-216ENST00000259951 LRRC3Q9BY71 257 aa17.25■□□□□ 0.35
HLA-F-216ENST00000259951 TSPYL1Q9H0U9 437 aa17.25■□□□□ 0.35
HLA-F-216ENST00000259951 PRO3102Q9H379 93 aa17.25■□□□□ 0.35
HLA-F-216ENST00000259951 RETREG1Q9H6L5 497 aa17.25■□□□□ 0.35
HLA-F-216ENST00000259951 TRPC7Q9HCX4 862 aa17.25■□□□□ 0.35
HLA-F-216ENST00000259951 ZDHHC7Q9NXF8 308 aa17.25■□□□□ 0.35
HLA-F-216ENST00000259951 GRHL1Q9NZI5 618 aa17.25■□□□□ 0.35
HLA-F-216ENST00000259951 XPO7Q9UIA9 1087 aaKnown RBP17.25■□□□□ 0.35
HLA-F-216ENST00000259951 WASH4PA8MWX3 477 aa17.24■□□□□ 0.35
HLA-F-216ENST00000259951 KCNN4O15554 427 aa17.24■□□□□ 0.35
HLA-F-216ENST00000259951 ATP8B1O43520 1251 aa17.24■□□□□ 0.35
HLA-F-216ENST00000259951 STK10O94804 968 aaKnown RBP17.24■□□□□ 0.35
HLA-F-216ENST00000259951 SEC31AO94979 1220 aaKnown RBP17.24■□□□□ 0.35
HLA-F-216ENST00000259951 POU2F2P09086 479 aa17.24■□□□□ 0.35
HLA-F-216ENST00000259951 HDCP19113 662 aa17.24■□□□□ 0.35
HLA-F-216ENST00000259951 GGCXP38435 758 aa17.24■□□□□ 0.35
HLA-F-216ENST00000259951 TNNT3P45378 269 aaPredicted RBP17.24■□□□□ 0.35
HLA-F-216ENST00000259951 VPS41P49754 854 aa17.24■□□□□ 0.35
HLA-F-216ENST00000259951 PLTPP55058 493 aa17.24■□□□□ 0.35
HLA-F-216ENST00000259951 GPS1Q13098 491 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms