RNA–Protein interactions for RNA: ENST00000258947.7

CALCOCO2-201, Transcript of calcium binding and coiled-coil domain 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CALCOCO2, Length 3,682 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-201ENST00000258947 CABS1Q96KC9 395 aa8.96□□□□□ -0.98
CALCOCO2-201ENST00000258947 PAFAH2Q99487 392 aa8.96□□□□□ -0.98
CALCOCO2-201ENST00000258947 SPON2Q9BUD6 331 aa8.96□□□□□ -0.98
CALCOCO2-201ENST00000258947 NSRP1Q9H0G5 558 aaKnown RBP8.96□□□□□ -0.98
CALCOCO2-201ENST00000258947 CATSPERBQ9H7T0 1116 aa8.96□□□□□ -0.98
CALCOCO2-201ENST00000258947 TLR8Q9NR97 1041 aaKnown RBP8.96□□□□□ -0.98
CALCOCO2-201ENST00000258947 PSD3Q9NYI0 1048 aa8.96□□□□□ -0.98
CALCOCO2-201ENST00000258947 PSMC3IPQ9P2W1 217 aaPredicted RBP8.96□□□□□ -0.98
CALCOCO2-201ENST00000258947 CEP290O15078 2479 aa8.96□□□□□ -0.98
CALCOCO2-201ENST00000258947 A0A0A0MRY4 1105 aa8.95□□□□□ -0.98
CALCOCO2-201ENST00000258947 GOLGA6L7A0A1B0GV03 622 aa8.95□□□□□ -0.98
CALCOCO2-201ENST00000258947 ARHGAP42A6NI28 874 aa8.95□□□□□ -0.98
CALCOCO2-201ENST00000258947 SPATA31D3P0C874 917 aa8.95□□□□□ -0.98
CALCOCO2-201ENST00000258947 CREB1P16220 341 aa8.95□□□□□ -0.98
CALCOCO2-201ENST00000258947 PAX3P23760 479 aa8.95□□□□□ -0.98
CALCOCO2-201ENST00000258947 ALDH1A3P47895 512 aa8.95□□□□□ -0.98
CALCOCO2-201ENST00000258947 PCSK7Q16549 785 aa8.95□□□□□ -0.98
CALCOCO2-201ENST00000258947 USP41Q3LFD5 358 aa8.95□□□□□ -0.98
CALCOCO2-201ENST00000258947 SPDYCQ5MJ68 293 aa8.95□□□□□ -0.98
CALCOCO2-201ENST00000258947 LGSNQ5TDP6 509 aa8.95□□□□□ -0.98
CALCOCO2-201ENST00000258947 NUGGCQ68CJ6 796 aa8.95□□□□□ -0.98
CALCOCO2-201ENST00000258947 CES3Q6UWW8 571 aa8.95□□□□□ -0.98
CALCOCO2-201ENST00000258947 SPATA31D4Q6ZUB0 917 aa8.95□□□□□ -0.98
CALCOCO2-201ENST00000258947 FAM47EQ6ZV65 393 aa8.95□□□□□ -0.98
CALCOCO2-201ENST00000258947 AUTS2Q8WXX7 1259 aa8.95□□□□□ -0.98
CALCOCO2-201ENST00000258947 SPATA13Q96N96 652 aa8.95□□□□□ -0.98
CALCOCO2-201ENST00000258947 SLC2A13Q96QE2 648 aa8.95□□□□□ -0.98
CALCOCO2-201ENST00000258947 NMUR1Q9HB89 426 aa8.95□□□□□ -0.98
CALCOCO2-201ENST00000258947 SMPD4Q9NXE4 827 aa8.95□□□□□ -0.98
CALCOCO2-201ENST00000258947 TTC3P53804 2025 aa8.95□□□□□ -0.98
CALCOCO2-201ENST00000258947 OR6C75A6NL08 312 aa8.95□□□□□ -0.98
CALCOCO2-201ENST00000258947 URODP06132 367 aa8.95□□□□□ -0.98
CALCOCO2-201ENST00000258947 FYNP06241 537 aa8.95□□□□□ -0.98
CALCOCO2-201ENST00000258947 ETFBP38117 255 aa8.95□□□□□ -0.98
CALCOCO2-201ENST00000258947 GRIA1P42261 906 aa8.95□□□□□ -0.98
CALCOCO2-201ENST00000258947 GEMIN4P57678 1058 aaKnown RBP8.95□□□□□ -0.98
CALCOCO2-201ENST00000258947 IRX4P78413 519 aa8.95□□□□□ -0.98
CALCOCO2-201ENST00000258947 COG7P83436 770 aa8.95□□□□□ -0.98
CALCOCO2-201ENST00000258947 SEPT6Q14141 434 aa8.95□□□□□ -0.98
CALCOCO2-201ENST00000258947 VEPH1Q14D04 833 aa8.95□□□□□ -0.98
CALCOCO2-201ENST00000258947 NLRP14Q86W24 1093 aa8.95□□□□□ -0.98
CALCOCO2-201ENST00000258947 ARHGAP18Q8N392 663 aa8.95□□□□□ -0.98
CALCOCO2-201ENST00000258947 NAT8LQ8N9F0 302 aa8.95□□□□□ -0.98
CALCOCO2-201ENST00000258947 IPMKQ8NFU5 416 aa8.95□□□□□ -0.98
CALCOCO2-201ENST00000258947 CENPIQ92674 756 aaPredicted RBP8.95□□□□□ -0.98
CALCOCO2-201ENST00000258947 CDKL2Q92772 493 aa8.95□□□□□ -0.98
CALCOCO2-201ENST00000258947 FSD1LQ9BXM9 530 aa8.95□□□□□ -0.98
CALCOCO2-201ENST00000258947 KIF9Q9HAQ2 790 aa8.95□□□□□ -0.98
CALCOCO2-201ENST00000258947 SP110Q9HB58 689 aa8.95□□□□□ -0.98
CALCOCO2-201ENST00000258947 ALG13Q9NP73 1137 aaKnown RBP8.95□□□□□ -0.98
CALCOCO2-201ENST00000258947 MTMR10Q9NXD2 777 aa8.95□□□□□ -0.98
CALCOCO2-201ENST00000258947 BFARQ9NZS9 450 aa8.95□□□□□ -0.98
CALCOCO2-201ENST00000258947 BCLAF3A2AJT9 711 aaKnown RBP8.95□□□□□ -0.98
CALCOCO2-201ENST00000258947 GMNCA6NCL1 334 aa8.95□□□□□ -0.98
CALCOCO2-201ENST00000258947 ALOX15BO15296 676 aa8.95□□□□□ -0.98
CALCOCO2-201ENST00000258947 PDE1BQ01064 536 aa8.95□□□□□ -0.98
CALCOCO2-201ENST00000258947 DSC1Q08554 894 aa8.95□□□□□ -0.98
CALCOCO2-201ENST00000258947 PKN2Q16513 984 aaKnown RBP8.95□□□□□ -0.98
CALCOCO2-201ENST00000258947 KBTBD12Q3ZCT8 623 aa8.95□□□□□ -0.98
CALCOCO2-201ENST00000258947 RAP1GAP2Q684P5 730 aa8.95□□□□□ -0.98
CALCOCO2-201ENST00000258947 SMYD5Q6GMV2 418 aa8.95□□□□□ -0.98
CALCOCO2-201ENST00000258947 ITPRIPL1Q6GPH6 555 aa8.95□□□□□ -0.98
CALCOCO2-201ENST00000258947 FOXR1Q6PIV2 292 aa8.95□□□□□ -0.98
CALCOCO2-201ENST00000258947 RNF19BQ6ZMZ0 732 aa8.95□□□□□ -0.98
CALCOCO2-201ENST00000258947 EXOC3L1Q86VI1 746 aa8.95□□□□□ -0.98
CALCOCO2-201ENST00000258947 FBXO22Q8NEZ5 403 aa8.95□□□□□ -0.98
CALCOCO2-201ENST00000258947 PPP1R14CQ8TAE6 165 aa8.95□□□□□ -0.98
CALCOCO2-201ENST00000258947 IRGQQ8WZA9 623 aa8.95□□□□□ -0.98
CALCOCO2-201ENST00000258947 TBC1D31Q96DN5 1066 aa8.95□□□□□ -0.98
CALCOCO2-201ENST00000258947 EPB41L4BQ9H329 900 aa8.95□□□□□ -0.98
CALCOCO2-201ENST00000258947 IQANK1A0A1B0GTG1 560 aa8.94□□□□□ -0.98
CALCOCO2-201ENST00000258947 SMAPO00193 183 aa8.94□□□□□ -0.98
CALCOCO2-201ENST00000258947 CHADO15335 359 aa8.94□□□□□ -0.98
CALCOCO2-201ENST00000258947 TLR5O60602 858 aa8.94□□□□□ -0.98
CALCOCO2-201ENST00000258947 PMPCBO75439 489 aa8.94□□□□□ -0.98
CALCOCO2-201ENST00000258947 AMHP03971 560 aa8.94□□□□□ -0.98
CALCOCO2-201ENST00000258947 CSF2RAP15509 400 aa8.94□□□□□ -0.98
CALCOCO2-201ENST00000258947 TPH1P17752 444 aa8.94□□□□□ -0.98
CALCOCO2-201ENST00000258947 KRT4P19013 534 aa8.94□□□□□ -0.98
CALCOCO2-201ENST00000258947 USP46P62068 366 aa8.94□□□□□ -0.98
CALCOCO2-201ENST00000258947 NKX3-2P78367 333 aa8.94□□□□□ -0.98
CALCOCO2-201ENST00000258947 GKAP1Q5VSY0 366 aaPredicted RBP8.94□□□□□ -0.98
CALCOCO2-201ENST00000258947 MICALCLQ6ZW33 695 aa8.94□□□□□ -0.98
CALCOCO2-201ENST00000258947 TAS1R1Q7RTX1 841 aa8.94□□□□□ -0.98
CALCOCO2-201ENST00000258947 SPPL2BQ8TCT7 592 aa8.94□□□□□ -0.98
CALCOCO2-201ENST00000258947 STAMBPL1Q96FJ0 436 aa8.94□□□□□ -0.98
CALCOCO2-201ENST00000258947 QKIQ96PU8 341 aaKnown RBP eCLIP8.94□□□□□ -0.984e-6■■□□□ 14.1
CALCOCO2-201ENST00000258947 XPO6Q96QU8 1125 aaKnown RBP8.94□□□□□ -0.98
CALCOCO2-201ENST00000258947 CCT8L2Q96SF2 557 aa8.94□□□□□ -0.98
CALCOCO2-201ENST00000258947 TRIM56Q9BRZ2 755 aaKnown RBP8.94□□□□□ -0.98
CALCOCO2-201ENST00000258947 TXLNGYQ9BZA5 131 aa8.94□□□□□ -0.98
CALCOCO2-201ENST00000258947 SLC13A1Q9BZW2 595 aa8.94□□□□□ -0.98
CALCOCO2-201ENST00000258947 USP29Q9HBJ7 922 aa8.94□□□□□ -0.98
CALCOCO2-201ENST00000258947 TET1Q8NFU7 2136 aa8.94□□□□□ -0.98
CALCOCO2-201ENST00000258947 WDR27A2RRH5 827 aa8.94□□□□□ -0.98
CALCOCO2-201ENST00000258947 IRAK2O43187 625 aa8.94□□□□□ -0.98
CALCOCO2-201ENST00000258947 OPHN1O60890 802 aa8.94□□□□□ -0.98
CALCOCO2-201ENST00000258947 SLC4A1P02730 911 aa8.94□□□□□ -0.98
CALCOCO2-201ENST00000258947 CLTBP09497 229 aa8.94□□□□□ -0.98
CALCOCO2-201ENST00000258947 SLC2A3P11169 496 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms