RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 SDHAF4Q5VUM1 108 aa19.1■□□□□ 0.65
SMARCC1-201ENST00000254480 TADA1Q96BN2 335 aa19.1■□□□□ 0.65
SMARCC1-201ENST00000254480 ZDHHC6Q9H6R6 413 aa19.1■□□□□ 0.65
SMARCC1-201ENST00000254480 TAGLN3Q9UI15 199 aa19.1■□□□□ 0.65
SMARCC1-201ENST00000254480 N6AMT1Q9Y5N5 214 aa19.1■□□□□ 0.65
SMARCC1-201ENST00000254480 TGFB3P10600 412 aa19.1■□□□□ 0.65
SMARCC1-201ENST00000254480 CDH17Q12864 832 aa19.1■□□□□ 0.65
SMARCC1-201ENST00000254480 ANKS6Q68DC2 871 aa19.1■□□□□ 0.65
SMARCC1-201ENST00000254480 WDR93Q6P2C0 686 aa19.1■□□□□ 0.65
SMARCC1-201ENST00000254480 ZSCAN18Q8TBC5 510 aaPredicted RBP19.1■□□□□ 0.65
SMARCC1-201ENST00000254480 LRRC4BQ9NT99 713 aa19.1■□□□□ 0.65
SMARCC1-201ENST00000254480 IGFBP4P22692 258 aa19.1■□□□□ 0.65
SMARCC1-201ENST00000254480 FBXO44Q9H4M3 255 aa19.1■□□□□ 0.65
SMARCC1-201ENST00000254480 L2HGDHQ9H9P8 463 aa19.1■□□□□ 0.65
SMARCC1-201ENST00000254480 BTN3A1O00481 513 aa19.1■□□□□ 0.65
SMARCC1-201ENST00000254480 DLGAP3O95886 979 aa19.1■□□□□ 0.65
SMARCC1-201ENST00000254480 CCL23P55773 120 aa19.1■□□□□ 0.65
SMARCC1-201ENST00000254480 FAAP100Q0VG06 881 aa19.1■□□□□ 0.65
SMARCC1-201ENST00000254480 CYP2R1Q6VVX0 501 aa19.1■□□□□ 0.65
SMARCC1-201ENST00000254480 MARK4Q96L34 752 aa19.1■□□□□ 0.65
SMARCC1-201ENST00000254480 TBL1YQ9BQ87 522 aa19.1■□□□□ 0.65
SMARCC1-201ENST00000254480 C3orf20Q8ND61 904 aa19.09■□□□□ 0.65
SMARCC1-201ENST00000254480 SPPL2AQ8TCT8 520 aa19.09■□□□□ 0.65
SMARCC1-201ENST00000254480 RSPH1Q8WYR4 309 aa19.09■□□□□ 0.65
SMARCC1-201ENST00000254480 FAR2Q96K12 515 aa19.09■□□□□ 0.65
SMARCC1-201ENST00000254480 NKRFO15226 690 aaKnown RBP eCLIP19.09■□□□□ 0.65
SMARCC1-201ENST00000254480 UBA1P22314 1058 aaKnown RBP19.09■□□□□ 0.65
SMARCC1-201ENST00000254480 MAPK1P28482 360 aa19.09■□□□□ 0.65
SMARCC1-201ENST00000254480 PPP3CAQ08209 521 aa19.09■□□□□ 0.65
SMARCC1-201ENST00000254480 FBXO39Q8N4B4 442 aa19.09■□□□□ 0.65
SMARCC1-201ENST00000254480 TMEM159Q96B96 161 aa19.09■□□□□ 0.65
SMARCC1-201ENST00000254480 A0A096LPK6 155 aa19.09■□□□□ 0.65
SMARCC1-201ENST00000254480 SEC22BO75396 215 aa19.09■□□□□ 0.65
SMARCC1-201ENST00000254480 PSMC3P17980 439 aa19.09■□□□□ 0.65
SMARCC1-201ENST00000254480 FEN1P39748 380 aaKnown RBP19.09■□□□□ 0.65
SMARCC1-201ENST00000254480 CCT8P50990 548 aa19.09■□□□□ 0.65
SMARCC1-201ENST00000254480 GPR152Q8TDT2 470 aa19.09■□□□□ 0.65
SMARCC1-201ENST00000254480 ANKRD49Q8WVL7 239 aa19.09■□□□□ 0.65
SMARCC1-201ENST00000254480 DPY30Q9C005 99 aa19.09■□□□□ 0.65
SMARCC1-201ENST00000254480 NINJ2Q9NZG7 142 aa19.09■□□□□ 0.65
SMARCC1-201ENST00000254480 L1RE1Q9UN81 338 aa19.09■□□□□ 0.65
SMARCC1-201ENST00000254480 TNFSF9P41273 254 aa19.09■□□□□ 0.65
SMARCC1-201ENST00000254480 SLC6A3Q01959 620 aa19.09■□□□□ 0.65
SMARCC1-201ENST00000254480 SPACA7Q96KW9 195 aa19.09■□□□□ 0.65
SMARCC1-201ENST00000254480 SENP8Q96LD8 212 aa19.09■□□□□ 0.65
SMARCC1-201ENST00000254480 RHBGQ9H310 441 aa19.09■□□□□ 0.65
SMARCC1-201ENST00000254480 BANF1O75531 89 aa19.09■□□□□ 0.65
SMARCC1-201ENST00000254480 PDE5AO76074 875 aa19.09■□□□□ 0.65
SMARCC1-201ENST00000254480 NFICP08651 508 aa19.09■□□□□ 0.65
SMARCC1-201ENST00000254480 FAM198AQ9UFP1 575 aa19.09■□□□□ 0.65
SMARCC1-201ENST00000254480 BPIFA1Q9NP55 256 aa19.08■□□□□ 0.65
SMARCC1-201ENST00000254480 KANSL3Q9P2N6 904 aa19.08■□□□□ 0.65
SMARCC1-201ENST00000254480 RBAK-RBAKDNI3L0D1 243 aa19.08■□□□□ 0.65
SMARCC1-201ENST00000254480 DNALI1O14645 258 aaPredicted RBP19.08■□□□□ 0.65
SMARCC1-201ENST00000254480 CASP7P55210 303 aa19.08■□□□□ 0.65
SMARCC1-201ENST00000254480 OASLQ15646 514 aaKnown RBP19.08■□□□□ 0.65
SMARCC1-201ENST00000254480 CEP78Q5JTW2 689 aa19.08■□□□□ 0.65
SMARCC1-201ENST00000254480 TBCELQ5QJ74 424 aa19.08■□□□□ 0.65
SMARCC1-201ENST00000254480 PRR23CQ6ZRP0 262 aa19.08■□□□□ 0.65
SMARCC1-201ENST00000254480 PRCCQ92733 491 aaPredicted RBP19.08■□□□□ 0.65
SMARCC1-201ENST00000254480 TCF7L2Q9NQB0 619 aa19.08■□□□□ 0.65
SMARCC1-201ENST00000254480 CCDC167Q9P0B6 97 aa19.08■□□□□ 0.65
SMARCC1-201ENST00000254480 PRLRP16471 622 aa19.08■□□□□ 0.64
SMARCC1-201ENST00000254480 CORO7P57737 925 aa19.08■□□□□ 0.64
SMARCC1-201ENST00000254480 ATP13A4Q4VNC1 1196 aa19.08■□□□□ 0.64
SMARCC1-201ENST00000254480 CCDC103Q8IW40 242 aa19.08■□□□□ 0.64
SMARCC1-201ENST00000254480 BRSK2Q8IWQ3 736 aa19.08■□□□□ 0.64
SMARCC1-201ENST00000254480 NAT9Q9BTE0 207 aa19.08■□□□□ 0.64
SMARCC1-201ENST00000254480 POMKQ9H5K3 350 aa19.08■□□□□ 0.64
SMARCC1-201ENST00000254480 CDHR5Q9HBB8 845 aa19.08■□□□□ 0.64
SMARCC1-201ENST00000254480 TOMM70O94826 608 aa19.08■□□□□ 0.64
SMARCC1-201ENST00000254480 PTPRAP18433 802 aa19.08■□□□□ 0.64
SMARCC1-201ENST00000254480 PEX5P50542 639 aa19.08■□□□□ 0.64
SMARCC1-201ENST00000254480 MAPK10P53779 464 aa19.08■□□□□ 0.64
SMARCC1-201ENST00000254480 PPM1LQ5SGD2 360 aa19.08■□□□□ 0.64
SMARCC1-201ENST00000254480 RETSATQ6NUM9 610 aa19.08■□□□□ 0.64
SMARCC1-201ENST00000254480 IRF6O14896 467 aa19.08■□□□□ 0.64
SMARCC1-201ENST00000254480 IL5RAQ01344 420 aa19.08■□□□□ 0.64
SMARCC1-201ENST00000254480 ZNF268Q14587 947 aaPredicted RBP19.08■□□□□ 0.64
SMARCC1-201ENST00000254480 SLC30A9Q6PML9 568 aa19.08■□□□□ 0.64
SMARCC1-201ENST00000254480 IZUMO2Q6UXV1 221 aa19.08■□□□□ 0.64
SMARCC1-201ENST00000254480 PIK3R5Q8WYR1 880 aa19.08■□□□□ 0.64
SMARCC1-201ENST00000254480 FUCA2Q9BTY2 467 aa19.08■□□□□ 0.64
SMARCC1-201ENST00000254480 ITIH4Q14624 930 aa19.07■□□□□ 0.64
SMARCC1-201ENST00000254480 RAP1GAP2Q684P5 730 aa19.07■□□□□ 0.64
SMARCC1-201ENST00000254480 TBCDQ9BTW9 1192 aa19.07■□□□□ 0.64
SMARCC1-201ENST00000254480 DNAJC18Q9H819 358 aa19.07■□□□□ 0.64
SMARCC1-201ENST00000254480 SALL1Q9NSC2 1324 aa19.07■□□□□ 0.64
SMARCC1-201ENST00000254480 NFASCO94856 1347 aa19.07■□□□□ 0.64
SMARCC1-201ENST00000254480 RENBPP51606 427 aa19.07■□□□□ 0.64
SMARCC1-201ENST00000254480 ZC3H12AQ5D1E8 599 aaKnown RBP19.07■□□□□ 0.64
SMARCC1-201ENST00000254480 TYW3Q6IPR3 259 aaKnown RBP19.07■□□□□ 0.64
SMARCC1-201ENST00000254480 CYP39A1Q9NYL5 469 aa19.07■□□□□ 0.64
SMARCC1-201ENST00000254480 SLC27A5Q9Y2P5 690 aa19.07■□□□□ 0.64
SMARCC1-201ENST00000254480 PPP2R3BQ9Y5P8 575 aa19.07■□□□□ 0.64
SMARCC1-201ENST00000254480 TRPV2Q9Y5S1 764 aa19.07■□□□□ 0.64
SMARCC1-201ENST00000254480 FRMPD4Q14CM0 1322 aa19.07■□□□□ 0.64
SMARCC1-201ENST00000254480 MROH7Q68CQ1 1323 aa19.07■□□□□ 0.64
SMARCC1-201ENST00000254480 CALB2P22676 271 aa19.07■□□□□ 0.64
SMARCC1-201ENST00000254480 ZCWPW2Q504Y3 356 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms