RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 SLC18A1P54219 525 aa16.23■□□□□ 0.19
LRFN1-201ENST00000248668 LIMS2Q7Z4I7 341 aa16.23■□□□□ 0.19
LRFN1-201ENST00000248668 NSMCE1Q8WV22 266 aa16.23■□□□□ 0.19
LRFN1-201ENST00000248668 OLFM3Q96PB7 478 aa16.23■□□□□ 0.19
LRFN1-201ENST00000248668 DNAI2Q9GZS0 605 aa16.23■□□□□ 0.19
LRFN1-201ENST00000248668 UBP1Q9NZI7 540 aa16.23■□□□□ 0.19
LRFN1-201ENST00000248668 KLHL8Q9P2G9 620 aaPredicted RBP16.23■□□□□ 0.19
LRFN1-201ENST00000248668 MARCOQ9UEW3 520 aaPredicted RBP16.23■□□□□ 0.19
LRFN1-201ENST00000248668 MGEA5O60502 916 aa16.22■□□□□ 0.19
LRFN1-201ENST00000248668 DGKIO75912 1065 aa16.22■□□□□ 0.19
LRFN1-201ENST00000248668 KITP10721 976 aa16.22■□□□□ 0.19
LRFN1-201ENST00000248668 SERPINB4P48594 390 aa16.22■□□□□ 0.19
LRFN1-201ENST00000248668 NEK3P51956 506 aa16.22■□□□□ 0.19
LRFN1-201ENST00000248668 TAF1BQ53T94 588 aaPredicted RBP16.22■□□□□ 0.19
LRFN1-201ENST00000248668 NDUFAF2Q8N183 169 aa16.22■□□□□ 0.19
LRFN1-201ENST00000248668 ZNF567Q8N184 647 aa16.22■□□□□ 0.19
LRFN1-201ENST00000248668 GBP7Q8N8V2 638 aaPredicted RBP16.22■□□□□ 0.19
LRFN1-201ENST00000248668 MICAL1Q8TDZ2 1067 aa16.22■□□□□ 0.19
LRFN1-201ENST00000248668 CELF6Q96J87 481 aaKnown RBP16.22■□□□□ 0.19
LRFN1-201ENST00000248668 NUDT5Q9UKK9 219 aa16.22■□□□□ 0.19
LRFN1-201ENST00000248668 TTC3P53804 2025 aa16.22■□□□□ 0.19
LRFN1-201ENST00000248668 SPAG6O75602 509 aa16.22■□□□□ 0.19
LRFN1-201ENST00000248668 ATP6V1G2O95670 118 aa16.22■□□□□ 0.19
LRFN1-201ENST00000248668 ABCG1P45844 678 aa16.22■□□□□ 0.19
LRFN1-201ENST00000248668 DAOAP59103 153 aa16.22■□□□□ 0.19
LRFN1-201ENST00000248668 ZCCHC23Q6ZST2 131 aa16.22■□□□□ 0.19
LRFN1-201ENST00000248668 TRIB2Q92519 343 aa16.22■□□□□ 0.19
LRFN1-201ENST00000248668 RNF34Q969K3 372 aa16.22■□□□□ 0.19
LRFN1-201ENST00000248668 ALKBH8Q96BT7 664 aaKnown RBP16.22■□□□□ 0.19
LRFN1-201ENST00000248668 MTG1Q9BT17 334 aaPredicted RBP16.22■□□□□ 0.19
LRFN1-201ENST00000248668 NOD2Q9HC29 1040 aa16.22■□□□□ 0.19
LRFN1-201ENST00000248668 KIF3CO14782 793 aa16.21■□□□□ 0.19
LRFN1-201ENST00000248668 ALDH3A1P30838 453 aa16.21■□□□□ 0.19
LRFN1-201ENST00000248668 ADRA1BP35368 520 aa16.21■□□□□ 0.19
LRFN1-201ENST00000248668 ETV4P43268 484 aa16.21■□□□□ 0.19
LRFN1-201ENST00000248668 TPI1P60174 286 aa16.21■□□□□ 0.19
LRFN1-201ENST00000248668 GRIK3Q13003 919 aa16.21■□□□□ 0.19
LRFN1-201ENST00000248668 C16orf46Q6P387 395 aa16.21■□□□□ 0.19
LRFN1-201ENST00000248668 SH2D5Q6ZV89 423 aa16.21■□□□□ 0.19
LRFN1-201ENST00000248668 MYLPFQ96A32 169 aa16.21■□□□□ 0.19
LRFN1-201ENST00000248668 PRR11Q96HE9 360 aaPredicted RBP16.21■□□□□ 0.19
LRFN1-201ENST00000248668 FBXO6Q9NRD1 293 aaPredicted RBP16.21■□□□□ 0.19
LRFN1-201ENST00000248668 HMX2A2RU54 273 aa16.21■□□□□ 0.19
LRFN1-201ENST00000248668 MANSC4A6NHS7 340 aaPredicted RBP16.21■□□□□ 0.19
LRFN1-201ENST00000248668 TROVE2P10155 538 aaKnown RBP eCLIP16.21■□□□□ 0.19
LRFN1-201ENST00000248668 TSHRP16473 764 aa16.21■□□□□ 0.19
LRFN1-201ENST00000248668 SEMA5AQ13591 1074 aa16.21■□□□□ 0.19
LRFN1-201ENST00000248668 RGS9BPQ6ZS82 235 aa16.21■□□□□ 0.19
LRFN1-201ENST00000248668 NPWQ8N729 165 aa16.21■□□□□ 0.19
LRFN1-201ENST00000248668 MCUQ8NE86 351 aa16.21■□□□□ 0.19
LRFN1-201ENST00000248668 SIK2Q9H0K1 926 aa16.21■□□□□ 0.19
LRFN1-201ENST00000248668 SYBUQ9NX95 663 aa16.21■□□□□ 0.19
LRFN1-201ENST00000248668 PSAT1Q9Y617 370 aa16.21■□□□□ 0.19
LRFN1-201ENST00000248668 MGRN1O60291 552 aa16.21■□□□□ 0.18
LRFN1-201ENST00000248668 DUSP11O75319 330 aaKnown RBP16.21■□□□□ 0.18
LRFN1-201ENST00000248668 RFPL1O75677 317 aa16.21■□□□□ 0.18
LRFN1-201ENST00000248668 ITGB1P05556 798 aa16.21■□□□□ 0.18
LRFN1-201ENST00000248668 SRGAP2BP0DMP2 458 aa16.21■□□□□ 0.18
LRFN1-201ENST00000248668 PRKCHP24723 683 aa16.21■□□□□ 0.18
LRFN1-201ENST00000248668 WASHC5Q12768 1159 aa16.21■□□□□ 0.18
LRFN1-201ENST00000248668 SSU72Q9NP77 194 aaKnown RBP16.21■□□□□ 0.18
LRFN1-201ENST00000248668 KANSL3Q9P2N6 904 aa16.21■□□□□ 0.18
LRFN1-201ENST00000248668 PADI3Q9ULW8 664 aa16.21■□□□□ 0.18
LRFN1-201ENST00000248668 UNC5CO95185 931 aa16.2■□□□□ 0.18
LRFN1-201ENST00000248668 LTFP02788 710 aa16.2■□□□□ 0.18
LRFN1-201ENST00000248668 TPSB2P20231 275 aa16.2■□□□□ 0.18
LRFN1-201ENST00000248668 SCNN1AP37088 669 aa16.2■□□□□ 0.18
LRFN1-201ENST00000248668 SLC18A2Q05940 514 aa16.2■□□□□ 0.18
LRFN1-201ENST00000248668 TPSAB1Q15661 275 aa16.2■□□□□ 0.18
LRFN1-201ENST00000248668 OR52K1Q8NGK4 314 aa16.2■□□□□ 0.18
LRFN1-201ENST00000248668 SCAMP5Q8TAC9 235 aa16.2■□□□□ 0.18
LRFN1-201ENST00000248668 USP33Q8TEY7 942 aa16.2■□□□□ 0.18
LRFN1-201ENST00000248668 YIPF3Q9GZM5 350 aa16.2■□□□□ 0.18
LRFN1-201ENST00000248668 VPS11Q9H270 941 aa16.2■□□□□ 0.18
LRFN1-201ENST00000248668 WDR6Q9NNW5 1121 aaKnown RBP16.2■□□□□ 0.18
LRFN1-201ENST00000248668 CYLDQ9NQC7 956 aa16.2■□□□□ 0.18
LRFN1-201ENST00000248668 SLC38A7Q9NVC3 462 aa16.2■□□□□ 0.18
LRFN1-201ENST00000248668 TMLHEQ9NVH6 421 aa16.2■□□□□ 0.18
LRFN1-201ENST00000248668 ZFP69BQ9UJL9 534 aa16.2■□□□□ 0.18
LRFN1-201ENST00000248668 PCDHA11Q9Y5I1 949 aa16.2■□□□□ 0.18
LRFN1-201ENST00000248668 STK10O94804 968 aaKnown RBP16.2■□□□□ 0.18
LRFN1-201ENST00000248668 ERVK-10P10266 1014 aa16.2■□□□□ 0.18
LRFN1-201ENST00000248668 ALADP13716 330 aa16.2■□□□□ 0.18
LRFN1-201ENST00000248668 MAGEA3P43357 314 aa16.2■□□□□ 0.18
LRFN1-201ENST00000248668 PPP2R5DQ14738 602 aa16.2■□□□□ 0.18
LRFN1-201ENST00000248668 RSPH3Q86UC2 560 aa16.2■□□□□ 0.18
LRFN1-201ENST00000248668 OXNAD1Q96HP4 312 aaPredicted RBP16.2■□□□□ 0.18
LRFN1-201ENST00000248668 RSRC1Q96IZ7 334 aaKnown RBP16.2■□□□□ 0.18
LRFN1-201ENST00000248668 ZFYVE28Q9HCC9 887 aa16.2■□□□□ 0.18
LRFN1-201ENST00000248668 XAB2Q9HCS7 855 aaKnown RBP16.2■□□□□ 0.18
LRFN1-201ENST00000248668 PDCD11Q14690 1871 aaKnown RBP16.2■□□□□ 0.18
LRFN1-201ENST00000248668 MAGEA6P43360 314 aa16.2■□□□□ 0.18
LRFN1-201ENST00000248668 TMPRSS15P98073 1019 aa16.2■□□□□ 0.18
LRFN1-201ENST00000248668 ZBTB16Q05516 673 aa16.2■□□□□ 0.18
LRFN1-201ENST00000248668 PDK1Q15118 436 aa16.2■□□□□ 0.18
LRFN1-201ENST00000248668 ARCQ7LC44 396 aa16.2■□□□□ 0.18
LRFN1-201ENST00000248668 SLC2A13Q96QE2 648 aa16.2■□□□□ 0.18
LRFN1-201ENST00000248668 SENP6Q9GZR1 1112 aaPredicted RBP16.2■□□□□ 0.18
LRFN1-201ENST00000248668 TKTL2Q9H0I9 626 aa16.2■□□□□ 0.18
LRFN1-201ENST00000248668 PNPLA8Q9NP80 782 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms