RNA–Protein interactions for RNA: ENST00000243108.4

HOXC6-201, Transcript of homeobox C6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC6, Length 1,733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-201ENST00000243108 CYTH4Q9UIA0 394 aa18.06■□□□□ 0.48
HOXC6-201ENST00000243108 KIAA1549LQ6ZVL6 1849 aa18.06■□□□□ 0.48
HOXC6-201ENST00000243108 LEFTY2O00292 366 aa18.06■□□□□ 0.48
HOXC6-201ENST00000243108 SCAMP3O14828 347 aaKnown RBP18.06■□□□□ 0.48
HOXC6-201ENST00000243108 LILRB5O75023 590 aa18.06■□□□□ 0.48
HOXC6-201ENST00000243108 GJA4P35212 333 aa18.06■□□□□ 0.48
HOXC6-201ENST00000243108 CARSP49589 748 aaKnown RBP18.06■□□□□ 0.48
HOXC6-201ENST00000243108 RPL7AP62424 266 aaKnown RBP18.06■□□□□ 0.48
HOXC6-201ENST00000243108 SLC7A9P82251 487 aa18.06■□□□□ 0.48
HOXC6-201ENST00000243108 DMWDQ09019 674 aa18.06■□□□□ 0.48
HOXC6-201ENST00000243108 PDGFRLQ15198 375 aa18.06■□□□□ 0.48
HOXC6-201ENST00000243108 CYP1B1Q16678 543 aa18.06■□□□□ 0.48
HOXC6-201ENST00000243108 SGO2Q562F6 1265 aa18.06■□□□□ 0.48
HOXC6-201ENST00000243108 ZC3H14Q6PJT7 736 aaKnown RBP18.06■□□□□ 0.48
HOXC6-201ENST00000243108 PRELID2Q8N945 189 aa18.06■□□□□ 0.48
HOXC6-201ENST00000243108 EZH1Q92800 747 aaPredicted RBP18.06■□□□□ 0.48
HOXC6-201ENST00000243108 NT5C1AQ9BXI3 368 aa18.06■□□□□ 0.48
HOXC6-201ENST00000243108 CSNK1G1Q9HCP0 422 aa18.06■□□□□ 0.48
HOXC6-201ENST00000243108 DMAP1Q9NPF5 467 aaPredicted RBP18.06■□□□□ 0.48
HOXC6-201ENST00000243108 ZSCAN32Q9NX65 697 aa18.06■□□□□ 0.48
HOXC6-201ENST00000243108 AMACRQ9UHK6 382 aa18.06■□□□□ 0.48
HOXC6-201ENST00000243108 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.06■□□□□ 0.48
HOXC6-201ENST00000243108 PCDHGA2Q9Y5H1 932 aa18.06■□□□□ 0.48
HOXC6-201ENST00000243108 TRDMT1O14717 391 aaKnown RBP18.05■□□□□ 0.48
HOXC6-201ENST00000243108 PHF2O75151 1096 aa18.05■□□□□ 0.48
HOXC6-201ENST00000243108 GJB6O95452 261 aa18.05■□□□□ 0.48
HOXC6-201ENST00000243108 TNNT3P45378 269 aaPredicted RBP18.05■□□□□ 0.48
HOXC6-201ENST00000243108 PPP3CCP48454 512 aa18.05■□□□□ 0.48
HOXC6-201ENST00000243108 CUL1Q13616 776 aa18.05■□□□□ 0.48
HOXC6-201ENST00000243108 LRRC32Q14392 662 aa18.05■□□□□ 0.48
HOXC6-201ENST00000243108 SIX1Q15475 284 aaPredicted RBP18.05■□□□□ 0.48
HOXC6-201ENST00000243108 DGKKQ5KSL6 1271 aa18.05■□□□□ 0.48
HOXC6-201ENST00000243108 GPRIN1Q7Z2K8 1008 aa18.05■□□□□ 0.48
HOXC6-201ENST00000243108 RHOT1Q8IXI2 618 aa18.05■□□□□ 0.48
HOXC6-201ENST00000243108 SPEM1Q8N4L4 309 aa18.05■□□□□ 0.48
HOXC6-201ENST00000243108 SLITRK1Q96PX8 696 aa18.05■□□□□ 0.48
HOXC6-201ENST00000243108 IER2Q9BTL4 223 aa18.05■□□□□ 0.48
HOXC6-201ENST00000243108 SMPD4Q9NXE4 827 aa18.05■□□□□ 0.48
HOXC6-201ENST00000243108 CPQQ9Y646 472 aa18.05■□□□□ 0.48
HOXC6-201ENST00000243108 ESYT3A0FGR9 886 aa18.04■□□□□ 0.48
HOXC6-201ENST00000243108 FAM92AA1XBS5 289 aa18.04■□□□□ 0.48
HOXC6-201ENST00000243108 K7ESF4 209 aa18.04■□□□□ 0.48
HOXC6-201ENST00000243108 PFKLP17858 780 aa18.04■□□□□ 0.48
HOXC6-201ENST00000243108 ADORA2BP29275 332 aa18.04■□□□□ 0.48
HOXC6-201ENST00000243108 CHRNA3P32297 505 aa18.04■□□□□ 0.48
HOXC6-201ENST00000243108 GABRB2P47870 512 aa18.04■□□□□ 0.48
HOXC6-201ENST00000243108 GALK1P51570 392 aa18.04■□□□□ 0.48
HOXC6-201ENST00000243108 CCR3P51677 355 aa18.04■□□□□ 0.48
HOXC6-201ENST00000243108 MAP3K7CLP57077 242 aa18.04■□□□□ 0.48
HOXC6-201ENST00000243108 ZNF252P-AS1Q0IIN9 211 aa18.04■□□□□ 0.48
HOXC6-201ENST00000243108 DHX34Q14147 1143 aaKnown RBP18.04■□□□□ 0.48
HOXC6-201ENST00000243108 STILQ15468 1287 aa18.04■□□□□ 0.48
HOXC6-201ENST00000243108 LCLAT1Q6UWP7 414 aa18.04■□□□□ 0.48
HOXC6-201ENST00000243108 ADAT2Q7Z6V5 191 aaKnown RBP18.04■□□□□ 0.48
HOXC6-201ENST00000243108 NIPA2Q8N8Q9 360 aa18.04■□□□□ 0.48
HOXC6-201ENST00000243108 FBXO32Q969P5 355 aa18.04■□□□□ 0.48
HOXC6-201ENST00000243108 ZFRQ96KR1 1074 aaKnown RBP18.04■□□□□ 0.48
HOXC6-201ENST00000243108 HEXIM2Q96MH2 286 aaKnown RBP18.04■□□□□ 0.48
HOXC6-201ENST00000243108 GMIPQ9P107 970 aa18.04■□□□□ 0.48
HOXC6-201ENST00000243108 WDR35Q9P2L0 1181 aa18.04■□□□□ 0.48
HOXC6-201ENST00000243108 HPCAL4Q9UM19 191 aa18.04■□□□□ 0.48
HOXC6-201ENST00000243108 HHLA1C9JL84 531 aa18.03■□□□□ 0.48
HOXC6-201ENST00000243108 TTI1O43156 1089 aa18.03■□□□□ 0.48
HOXC6-201ENST00000243108 RTN3O95197 1032 aaPredicted RBP18.03■□□□□ 0.48
HOXC6-201ENST00000243108 EGFP01133 1207 aa18.03■□□□□ 0.48
HOXC6-201ENST00000243108 ZDHHC11BP0C7U3 371 aa18.03■□□□□ 0.48
HOXC6-201ENST00000243108 GPD2P43304 727 aa18.03■□□□□ 0.48
HOXC6-201ENST00000243108 CXCL12P48061 93 aa18.03■□□□□ 0.48
HOXC6-201ENST00000243108 TAS2R40P59535 323 aa18.03■□□□□ 0.48
HOXC6-201ENST00000243108 GAB4Q2WGN9 574 aa18.03■□□□□ 0.48
HOXC6-201ENST00000243108 CLEC20AQ6ZU45 233 aa18.03■□□□□ 0.48
HOXC6-201ENST00000243108 KATNAL2Q8IYT4 538 aa18.03■□□□□ 0.48
HOXC6-201ENST00000243108 DCLK2Q8N568 766 aa18.03■□□□□ 0.48
HOXC6-201ENST00000243108 C12orf50Q8NA57 414 aaPredicted RBP18.03■□□□□ 0.48
HOXC6-201ENST00000243108 C18orf8Q96DM3 657 aa18.03■□□□□ 0.48
HOXC6-201ENST00000243108 MCEEQ96PE7 176 aa18.03■□□□□ 0.48
HOXC6-201ENST00000243108 CPXM1Q96SM3 734 aa18.03■□□□□ 0.48
HOXC6-201ENST00000243108 HNRNPABQ99729 332 aaKnown RBP18.03■□□□□ 0.48
HOXC6-201ENST00000243108 ACBD3Q9H3P7 528 aa18.03■□□□□ 0.48
HOXC6-201ENST00000243108 CCSER2Q9H7U1 834 aa18.03■□□□□ 0.48
HOXC6-201ENST00000243108 POLR3BQ9NW08 1133 aaPredicted RBP18.03■□□□□ 0.48
HOXC6-201ENST00000243108 PCYOX1Q9UHG3 505 aa18.03■□□□□ 0.48
HOXC6-201ENST00000243108 NFU1Q9UMS0 254 aa18.03■□□□□ 0.48
HOXC6-201ENST00000243108 FAM187AA6NFU0 413 aa18.03■□□□□ 0.48
HOXC6-201ENST00000243108 SIGLEC16A6NMB1 481 aa18.03■□□□□ 0.48
HOXC6-201ENST00000243108 M0QYV0 167 aa18.03■□□□□ 0.48
HOXC6-201ENST00000243108 COCHO43405 550 aa18.03■□□□□ 0.48
HOXC6-201ENST00000243108 IFNAR2P48551 515 aa18.03■□□□□ 0.48
HOXC6-201ENST00000243108 SNX30Q5VWJ9 437 aa18.03■□□□□ 0.48
HOXC6-201ENST00000243108 SND1Q7KZF4 910 aaKnown RBP eCLIP18.03■□□□□ 0.48
HOXC6-201ENST00000243108 OVCA2Q8WZ82 227 aa18.03■□□□□ 0.48
HOXC6-201ENST00000243108 ATP2A3Q93084 1043 aa18.03■□□□□ 0.48
HOXC6-201ENST00000243108 WBP2Q969T9 261 aa18.03■□□□□ 0.48
HOXC6-201ENST00000243108 EML5Q05BV3 1969 aa18.02■□□□□ 0.48
HOXC6-201ENST00000243108 TCRBV7S2A1N4TA0A589 114 aa18.02■□□□□ 0.48
HOXC6-201ENST00000243108 ANTXRLA6NF34 631 aa18.02■□□□□ 0.48
HOXC6-201ENST00000243108 ECHS1P30084 290 aa18.02■□□□□ 0.48
HOXC6-201ENST00000243108 DR1Q01658 176 aa18.02■□□□□ 0.48
HOXC6-201ENST00000243108 OGDHQ02218 1023 aa18.02■□□□□ 0.48
HOXC6-201ENST00000243108 PDCLQ13371 301 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms