RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 YTHDF3Q7Z739 585 aaKnown RBP19.03■□□□□ 0.64
HOXC11-201ENST00000243082 SCN4BQ8IWT1 228 aa19.03■□□□□ 0.64
HOXC11-201ENST00000243082 RNF34Q969K3 372 aa19.03■□□□□ 0.64
HOXC11-201ENST00000243082 MAGEB18Q96M61 343 aa19.03■□□□□ 0.64
HOXC11-201ENST00000243082 EBNA1BP2Q99848 306 aaKnown RBP19.03■□□□□ 0.64
HOXC11-201ENST00000243082 OSBPL2Q9H1P3 480 aa19.03■□□□□ 0.64
HOXC11-201ENST00000243082 SSU72Q9NP77 194 aaKnown RBP19.03■□□□□ 0.64
HOXC11-201ENST00000243082 ARHGEF38Q9NXL2 777 aa19.03■□□□□ 0.64
HOXC11-201ENST00000243082 ABI2Q9NYB9 513 aaPredicted RBP19.03■□□□□ 0.64
HOXC11-201ENST00000243082 PRKCHP24723 683 aa19.02■□□□□ 0.64
HOXC11-201ENST00000243082 EPHB2P29323 1055 aa19.02■□□□□ 0.64
HOXC11-201ENST00000243082 RPA3P35244 121 aaPredicted RBP19.02■□□□□ 0.64
HOXC11-201ENST00000243082 PPIDQ08752 370 aaKnown RBP19.02■□□□□ 0.64
HOXC11-201ENST00000243082 BFSP2Q13515 415 aa19.02■□□□□ 0.64
HOXC11-201ENST00000243082 ARHGEF6Q15052 776 aa19.02■□□□□ 0.64
HOXC11-201ENST00000243082 VARS2Q5ST30 1063 aaKnown RBP19.02■□□□□ 0.64
HOXC11-201ENST00000243082 PDCD7Q8N8D1 485 aaKnown RBP19.02■□□□□ 0.64
HOXC11-201ENST00000243082 SH3TC2Q8TF17 1288 aa19.02■□□□□ 0.64
HOXC11-201ENST00000243082 CABS1Q96KC9 395 aa19.02■□□□□ 0.64
HOXC11-201ENST00000243082 CASD1Q96PB1 797 aa19.02■□□□□ 0.64
HOXC11-201ENST00000243082 TRIM56Q9BRZ2 755 aaKnown RBP19.02■□□□□ 0.64
HOXC11-201ENST00000243082 NMUR1Q9HB89 426 aa19.02■□□□□ 0.64
HOXC11-201ENST00000243082 EIF2B3Q9NR50 452 aaKnown RBP19.02■□□□□ 0.64
HOXC11-201ENST00000243082 KCNK1O00180 336 aa19.01■□□□□ 0.63
HOXC11-201ENST00000243082 SYN3O14994 580 aa19.01■□□□□ 0.63
HOXC11-201ENST00000243082 NCAM2O15394 837 aa19.01■□□□□ 0.63
HOXC11-201ENST00000243082 CPP00450 1065 aa19.01■□□□□ 0.63
HOXC11-201ENST00000243082 GSTA2P09210 222 aa19.01■□□□□ 0.63
HOXC11-201ENST00000243082 MLNP12872 115 aa19.01■□□□□ 0.63
HOXC11-201ENST00000243082 PSMB4P28070 264 aa19.01■□□□□ 0.63
HOXC11-201ENST00000243082 FOXN2P32314 431 aa19.01■□□□□ 0.63
HOXC11-201ENST00000243082 SARNPP82979 210 aaKnown RBP19.01■□□□□ 0.63
HOXC11-201ENST00000243082 TCTN1Q2MV58 587 aa19.01■□□□□ 0.63
HOXC11-201ENST00000243082 CASP10Q92851 521 aa19.01■□□□□ 0.63
HOXC11-201ENST00000243082 FUBP3Q96I24 572 aaKnown RBP eCLIP19.01■□□□□ 0.63
HOXC11-201ENST00000243082 ELAC2Q9BQ52 826 aaKnown RBP19.01■□□□□ 0.63
HOXC11-201ENST00000243082 IGSF9Q9P2J2 1179 aa19.01■□□□□ 0.63
HOXC11-201ENST00000243082 SFMBT1Q9UHJ3 866 aa19.01■□□□□ 0.63
HOXC11-201ENST00000243082 NEU3Q9UQ49 428 aa19.01■□□□□ 0.63
HOXC11-201ENST00000243082 PCDHB7Q9Y5E2 793 aa19.01■□□□□ 0.63
HOXC11-201ENST00000243082 MYO18AQ92614 2054 aaKnown RBP19.01■□□□□ 0.63
HOXC11-201ENST00000243082 CXorf49A8MYA2 514 aaPredicted RBP19.01■□□□□ 0.63
HOXC11-201ENST00000243082 APOEP02649 317 aa19.01■□□□□ 0.63
HOXC11-201ENST00000243082 PTPN3P26045 913 aa19.01■□□□□ 0.63
HOXC11-201ENST00000243082 GATMP50440 423 aa19.01■□□□□ 0.63
HOXC11-201ENST00000243082 IL9RQ01113 521 aa19.01■□□□□ 0.63
HOXC11-201ENST00000243082 FAAP100Q0VG06 881 aa19.01■□□□□ 0.63
HOXC11-201ENST00000243082 MRPL58Q14197 206 aaKnown RBP19.01■□□□□ 0.63
HOXC11-201ENST00000243082 STKLD1Q8NE28 680 aa19.01■□□□□ 0.63
HOXC11-201ENST00000243082 TGS1Q96RS0 853 aaKnown RBP19.01■□□□□ 0.63
HOXC11-201ENST00000243082 SEZ6LQ9BYH1 1024 aa19.01■□□□□ 0.63
HOXC11-201ENST00000243082 SMOC2Q9H3U7 446 aa19.01■□□□□ 0.63
HOXC11-201ENST00000243082 SMYD2Q9NRG4 433 aa19.01■□□□□ 0.63
HOXC11-201ENST00000243082 FGFR1OP2Q9NVK5 253 aa19.01■□□□□ 0.63
HOXC11-201ENST00000243082 ADAM28Q9UKQ2 775 aa19.01■□□□□ 0.63
HOXC11-201ENST00000243082 MAD1L1Q9Y6D9 718 aa19.01■□□□□ 0.63
HOXC11-201ENST00000243082 TTC3P53804 2025 aa19.01■□□□□ 0.63
HOXC11-201ENST00000243082 DNM1LO00429 736 aa19■□□□□ 0.63
HOXC11-201ENST00000243082 INHBAP08476 426 aa19■□□□□ 0.63
HOXC11-201ENST00000243082 CA4P22748 312 aa19■□□□□ 0.63
HOXC11-201ENST00000243082 CYP2C18P33260 490 aa19■□□□□ 0.63
HOXC11-201ENST00000243082 GPR15P49685 360 aa19■□□□□ 0.63
HOXC11-201ENST00000243082 GALNT2Q10471 571 aa19■□□□□ 0.63
HOXC11-201ENST00000243082 SLC1A5Q15758 541 aa19■□□□□ 0.63
HOXC11-201ENST00000243082 NFE2Q16621 373 aaPredicted RBP19■□□□□ 0.63
HOXC11-201ENST00000243082 DDR2Q16832 855 aa19■□□□□ 0.63
HOXC11-201ENST00000243082 BRMS1LQ5PSV4 323 aa19■□□□□ 0.63
HOXC11-201ENST00000243082 SDHAF4Q5VUM1 108 aa19■□□□□ 0.63
HOXC11-201ENST00000243082 LRRC8BQ6P9F7 803 aa19■□□□□ 0.63
HOXC11-201ENST00000243082 PID1Q7Z2X4 250 aa19■□□□□ 0.63
HOXC11-201ENST00000243082 SLC26A11Q86WA9 606 aa19■□□□□ 0.63
HOXC11-201ENST00000243082 ABI1Q8IZP0 508 aa19■□□□□ 0.63
HOXC11-201ENST00000243082 CCDC197Q8NCU1 140 aa19■□□□□ 0.63
HOXC11-201ENST00000243082 HDAC11Q96DB2 347 aa19■□□□□ 0.63
HOXC11-201ENST00000243082 GPR62Q9BZJ7 368 aa19■□□□□ 0.63
HOXC11-201ENST00000243082 BRD8Q9H0E9 1235 aa19■□□□□ 0.63
HOXC11-201ENST00000243082 NSRP1Q9H0G5 558 aaKnown RBP19■□□□□ 0.63
HOXC11-201ENST00000243082 UNC93B1Q9H1C4 597 aa19■□□□□ 0.63
HOXC11-201ENST00000243082 OSER1Q9NX31 292 aa19■□□□□ 0.63
HOXC11-201ENST00000243082 GRID1Q9ULK0 1009 aa19■□□□□ 0.63
HOXC11-201ENST00000243082 PCDHA11Q9Y5I1 949 aa19■□□□□ 0.63
HOXC11-201ENST00000243082 IKBKGQ9Y6K9 419 aa19■□□□□ 0.63
HOXC11-201ENST00000243082 IQANK1A0A1B0GTG1 560 aa19■□□□□ 0.63
HOXC11-201ENST00000243082 A0A1W2PQH9 124 aa19■□□□□ 0.63
HOXC11-201ENST00000243082 ZNF189O75820 626 aaPredicted RBP19■□□□□ 0.63
HOXC11-201ENST00000243082 TAC1P20366 129 aa19■□□□□ 0.63
HOXC11-201ENST00000243082 ARTNQ5T4W7 220 aa19■□□□□ 0.63
HOXC11-201ENST00000243082 NUGGCQ68CJ6 796 aa19■□□□□ 0.63
HOXC11-201ENST00000243082 LRRC6Q86X45 466 aa19■□□□□ 0.63
HOXC11-201ENST00000243082 BANPQ8N9N5 519 aa19■□□□□ 0.63
HOXC11-201ENST00000243082 GSDMBQ8TAX9 411 aa19■□□□□ 0.63
HOXC11-201ENST00000243082 DEPDC1BQ8WUY9 529 aa19■□□□□ 0.63
HOXC11-201ENST00000243082 C8orf48Q96LL4 319 aa19■□□□□ 0.63
HOXC11-201ENST00000243082 HAPLN3Q96S86 360 aa19■□□□□ 0.63
HOXC11-201ENST00000243082 PAIP2Q9BPZ3 127 aaKnown RBP19■□□□□ 0.63
HOXC11-201ENST00000243082 GORASP1Q9BQQ3 440 aa19■□□□□ 0.63
HOXC11-201ENST00000243082 SAMD15Q9P1V8 674 aa19■□□□□ 0.63
HOXC11-201ENST00000243082 VWA8A3KMH1 1905 aa19■□□□□ 0.63
HOXC11-201ENST00000243082 MSI1O43347 362 aaKnown RBP18.99■□□□□ 0.63
HOXC11-201ENST00000243082 SNX3O60493 162 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms