RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 KRT82Q9NSB4 513 aa16.74■□□□□ 0.27
LTBR-201ENST00000228918 SLC7A8Q9UHI5 535 aa16.74■□□□□ 0.27
LTBR-201ENST00000228918 ANGPTL2Q9UKU9 493 aa16.74■□□□□ 0.27
LTBR-201ENST00000228918 PSAT1Q9Y617 370 aa16.74■□□□□ 0.27
LTBR-201ENST00000228918 RBM47A0AV96 593 aaKnown RBP16.73■□□□□ 0.27
LTBR-201ENST00000228918 OPHN1O60890 802 aa16.73■□□□□ 0.27
LTBR-201ENST00000228918 PDGFRBP09619 1106 aa16.73■□□□□ 0.27
LTBR-201ENST00000228918 ADCYAP1R1P41586 468 aa16.73■□□□□ 0.27
LTBR-201ENST00000228918 SLC1A6P48664 564 aa16.73■□□□□ 0.27
LTBR-201ENST00000228918 ACTR3P61158 418 aa16.73■□□□□ 0.27
LTBR-201ENST00000228918 RBBP5Q15291 538 aaKnown RBP16.73■□□□□ 0.27
LTBR-201ENST00000228918 KIZQ2M2Z5 673 aa16.73■□□□□ 0.27
LTBR-201ENST00000228918 RABGAP1LQ5R372 815 aa16.73■□□□□ 0.27
LTBR-201ENST00000228918 MYLK4Q86YV6 388 aaPredicted RBP16.73■□□□□ 0.27
LTBR-201ENST00000228918 SYT15Q9BQS2 421 aa16.73■□□□□ 0.27
LTBR-201ENST00000228918 YIPF3Q9GZM5 350 aa16.73■□□□□ 0.27
LTBR-201ENST00000228918 PIH1D1Q9NWS0 290 aaKnown RBP16.73■□□□□ 0.27
LTBR-201ENST00000228918 HES2Q9Y543 173 aa16.73■□□□□ 0.27
LTBR-201ENST00000228918 PLXNB2O15031 1838 aa16.73■□□□□ 0.27
LTBR-201ENST00000228918 MAP3K7O43318 606 aa16.73■□□□□ 0.27
LTBR-201ENST00000228918 PRKCGP05129 697 aa16.73■□□□□ 0.27
LTBR-201ENST00000228918 ITGA2BP08514 1039 aa16.73■□□□□ 0.27
LTBR-201ENST00000228918 KCNA4P22459 653 aa16.73■□□□□ 0.27
LTBR-201ENST00000228918 LMO2P25791 158 aa16.73■□□□□ 0.27
LTBR-201ENST00000228918 MATKP42679 507 aa16.73■□□□□ 0.27
LTBR-201ENST00000228918 GLUD2P49448 558 aa16.73■□□□□ 0.27
LTBR-201ENST00000228918 SULT1E1P49888 294 aa16.73■□□□□ 0.27
LTBR-201ENST00000228918 ZNF792Q3KQV3 632 aa16.73■□□□□ 0.27
LTBR-201ENST00000228918 C6orf163Q5TEZ5 329 aa16.73■□□□□ 0.27
LTBR-201ENST00000228918 TMEM154Q6P9G4 183 aa16.73■□□□□ 0.27
LTBR-201ENST00000228918 KBTBD2Q8IY47 623 aa16.73■□□□□ 0.27
LTBR-201ENST00000228918 UCMAQ8WVF2 138 aa16.73■□□□□ 0.27
LTBR-201ENST00000228918 ATP2A3Q93084 1043 aa16.73■□□□□ 0.27
LTBR-201ENST00000228918 P2RY11Q96G91 374 aa16.73■□□□□ 0.27
LTBR-201ENST00000228918 HSFY1Q96LI6 401 aa16.73■□□□□ 0.27
LTBR-201ENST00000228918 ADARB2Q9NS39 739 aaKnown RBP16.73■□□□□ 0.27
LTBR-201ENST00000228918 SYBUQ9NX95 663 aa16.73■□□□□ 0.27
LTBR-201ENST00000228918 DCDC2Q9UHG0 476 aa16.73■□□□□ 0.27
LTBR-201ENST00000228918 STK10O94804 968 aaKnown RBP16.72■□□□□ 0.27
LTBR-201ENST00000228918 SERPINE1P05121 402 aa16.72■□□□□ 0.27
LTBR-201ENST00000228918 PSMB4P28070 264 aa16.72■□□□□ 0.27
LTBR-201ENST00000228918 CPOXP36551 454 aa16.72■□□□□ 0.27
LTBR-201ENST00000228918 MXRA7P84157 204 aa16.72■□□□□ 0.27
LTBR-201ENST00000228918 SLC25A52Q3SY17 297 aa16.72■□□□□ 0.27
LTBR-201ENST00000228918 FBXO47Q5MNV8 452 aa16.72■□□□□ 0.27
LTBR-201ENST00000228918 OTUD1Q5VV17 481 aaPredicted RBP16.72■□□□□ 0.27
LTBR-201ENST00000228918 ALKAL1Q6UXT8 129 aa16.72■□□□□ 0.27
LTBR-201ENST00000228918 FASTKD5Q7L8L6 764 aaKnown RBP16.72■□□□□ 0.27
LTBR-201ENST00000228918 PSTKQ8IV42 348 aaKnown RBP16.72■□□□□ 0.27
LTBR-201ENST00000228918 DEFB106AQ8N104 65 aa16.72■□□□□ 0.27
LTBR-201ENST00000228918 NETO2Q8NC67 525 aa16.72■□□□□ 0.27
LTBR-201ENST00000228918 SLC2A14Q8TDB8 520 aa16.72■□□□□ 0.27
LTBR-201ENST00000228918 ZNF184Q99676 751 aaPredicted RBP16.72■□□□□ 0.27
LTBR-201ENST00000228918 NAT9Q9BTE0 207 aa16.72■□□□□ 0.27
LTBR-201ENST00000228918 CEP41Q9BYV8 373 aa16.72■□□□□ 0.27
LTBR-201ENST00000228918 ADAMTS10Q9H324 1103 aa16.72■□□□□ 0.27
LTBR-201ENST00000228918 PRDM16Q9HAZ2 1276 aa16.72■□□□□ 0.27
LTBR-201ENST00000228918 SOX13Q9UN79 622 aa16.72■□□□□ 0.27
LTBR-201ENST00000228918 SF3B1O75533 1304 aaKnown RBP eCLIP16.72■□□□□ 0.27
LTBR-201ENST00000228918 MEI4A8MW99 385 aa16.72■□□□□ 0.27
LTBR-201ENST00000228918 UPP2O95045 317 aa16.72■□□□□ 0.27
LTBR-201ENST00000228918 PROCP04070 461 aa16.72■□□□□ 0.27
LTBR-201ENST00000228918 EFHC1Q5JVL4 640 aa16.72■□□□□ 0.27
LTBR-201ENST00000228918 THEMIS2Q5TEJ8 643 aa16.72■□□□□ 0.27
LTBR-201ENST00000228918 MAVSQ7Z434 540 aa16.72■□□□□ 0.27
LTBR-201ENST00000228918 APLFQ8IW19 511 aaPredicted RBP16.72■□□□□ 0.27
LTBR-201ENST00000228918 RNF139Q8WU17 664 aa16.72■□□□□ 0.27
LTBR-201ENST00000228918 OPTNQ96CV9 577 aa16.72■□□□□ 0.27
LTBR-201ENST00000228918 SORT1Q99523 831 aa16.72■□□□□ 0.27
LTBR-201ENST00000228918 KATNBL1Q9H079 304 aa16.72■□□□□ 0.27
LTBR-201ENST00000228918 RNF19AQ9NV58 838 aa16.72■□□□□ 0.27
LTBR-201ENST00000228918 UBQLN1Q9UMX0 589 aaKnown RBP16.72■□□□□ 0.27
LTBR-201ENST00000228918 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.71■□□□□ 0.27
LTBR-201ENST00000228918 PIRO00625 290 aa16.71■□□□□ 0.27
LTBR-201ENST00000228918 RECQL4O94761 1208 aa16.71■□□□□ 0.27
LTBR-201ENST00000228918 DDNO94850 711 aaPredicted RBP16.71■□□□□ 0.27
LTBR-201ENST00000228918 C6orf222P0C671 652 aaPredicted RBP16.71■□□□□ 0.27
LTBR-201ENST00000228918 ANPEPP15144 967 aa16.71■□□□□ 0.27
LTBR-201ENST00000228918 GNL1P36915 607 aaPredicted RBP16.71■□□□□ 0.27
LTBR-201ENST00000228918 TMEM62Q0P6H9 643 aa16.71■□□□□ 0.27
LTBR-201ENST00000228918 INSCQ1MX18 579 aa16.71■□□□□ 0.27
LTBR-201ENST00000228918 ATG14Q6ZNE5 492 aa16.71■□□□□ 0.27
LTBR-201ENST00000228918 CATSPER4Q7RTX7 472 aa16.71■□□□□ 0.27
LTBR-201ENST00000228918 RASSF3Q86WH2 238 aa16.71■□□□□ 0.27
LTBR-201ENST00000228918 NXF3Q9H4D5 531 aaKnown RBP16.71■□□□□ 0.27
LTBR-201ENST00000228918 GPAMQ9HCL2 828 aa16.71■□□□□ 0.27
LTBR-201ENST00000228918 GINS2Q9Y248 185 aa16.71■□□□□ 0.27
LTBR-201ENST00000228918 SBF1O95248 1867 aa16.71■□□□□ 0.27
LTBR-201ENST00000228918 SPTLC1O15269 473 aa16.71■□□□□ 0.27
LTBR-201ENST00000228918 DAB1O75553 588 aa16.71■□□□□ 0.27
LTBR-201ENST00000228918 SP100P23497 879 aaPredicted RBP16.71■□□□□ 0.27
LTBR-201ENST00000228918 TKTP29401 623 aaKnown RBP16.71■□□□□ 0.27
LTBR-201ENST00000228918 PITX1P78337 314 aaPredicted RBP16.71■□□□□ 0.27
LTBR-201ENST00000228918 PDE1BQ01064 536 aa16.71■□□□□ 0.27
LTBR-201ENST00000228918 ZNF618Q5T7W0 954 aa16.71■□□□□ 0.27
LTBR-201ENST00000228918 C1orf146Q5VVC0 180 aa16.71■□□□□ 0.27
LTBR-201ENST00000228918 BSPRYQ5W0U4 402 aa16.71■□□□□ 0.27
LTBR-201ENST00000228918 NOTUMQ6P988 496 aa16.71■□□□□ 0.27
LTBR-201ENST00000228918 C10orf107Q8IVU9 208 aa16.71■□□□□ 0.27
LTBR-201ENST00000228918 UPF1Q92900 1129 aaKnown RBP eCLIP16.71■□□□□ 0.272e-7■■■■■ 33.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms