RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 BGNP21810 368 aa13.53□□□□□ -0.24
COL1A1-201ENST00000225964 HPCAL1P37235 193 aa13.53□□□□□ -0.24
COL1A1-201ENST00000225964 MAD2L1Q13257 205 aaPredicted RBP13.53□□□□□ -0.24
COL1A1-201ENST00000225964 C1DQ13901 141 aaKnown RBP13.53□□□□□ -0.24
COL1A1-201ENST00000225964 RCN1Q15293 331 aa13.53□□□□□ -0.24
COL1A1-201ENST00000225964 FNDC5Q8NAU1 212 aa13.53□□□□□ -0.24
COL1A1-201ENST00000225964 GRIN3AQ8TCU5 1115 aa13.53□□□□□ -0.24
COL1A1-201ENST00000225964 SERPINB11Q96P15 392 aa13.53□□□□□ -0.24
COL1A1-201ENST00000225964 SH3GL2Q99962 352 aa13.53□□□□□ -0.24
COL1A1-201ENST00000225964 SESN1Q9Y6P5 492 aa13.53□□□□□ -0.24
COL1A1-201ENST00000225964 NCAM2O15394 837 aa13.53□□□□□ -0.24
COL1A1-201ENST00000225964 PEX1O43933 1283 aa13.53□□□□□ -0.24
COL1A1-201ENST00000225964 BDNFP23560 247 aa13.53□□□□□ -0.24
COL1A1-201ENST00000225964 IL5RAQ01344 420 aa13.53□□□□□ -0.24
COL1A1-201ENST00000225964 FGD3Q5JSP0 725 aa13.53□□□□□ -0.24
COL1A1-201ENST00000225964 MARK2Q7KZI7 788 aaKnown RBP13.53□□□□□ -0.24
COL1A1-201ENST00000225964 C4orf19Q8IY42 314 aa13.53□□□□□ -0.24
COL1A1-201ENST00000225964 TAS1R2Q8TE23 839 aa13.53□□□□□ -0.24
COL1A1-201ENST00000225964 HAO1Q9UJM8 370 aa13.53□□□□□ -0.24
COL1A1-201ENST00000225964 PSMC3P17980 439 aa13.53□□□□□ -0.24
COL1A1-201ENST00000225964 RRM1P23921 792 aa13.53□□□□□ -0.24
COL1A1-201ENST00000225964 CD151P48509 253 aa13.53□□□□□ -0.24
COL1A1-201ENST00000225964 AQP5P55064 265 aa13.53□□□□□ -0.24
COL1A1-201ENST00000225964 GNA13Q14344 377 aa13.53□□□□□ -0.24
COL1A1-201ENST00000225964 GJC2Q5T442 439 aaPredicted RBP13.53□□□□□ -0.24
COL1A1-201ENST00000225964 GRTP1Q5TC63 336 aa13.53□□□□□ -0.24
COL1A1-201ENST00000225964 USP45Q70EL2 814 aa13.53□□□□□ -0.24
COL1A1-201ENST00000225964 RNF44Q7L0R7 432 aa13.53□□□□□ -0.24
COL1A1-201ENST00000225964 ERGIC2Q96RQ1 377 aa13.53□□□□□ -0.24
COL1A1-201ENST00000225964 TMEM120AQ9BXJ8 343 aa13.53□□□□□ -0.24
COL1A1-201ENST00000225964 ENTPD4Q9Y227 616 aa13.53□□□□□ -0.24
COL1A1-201ENST00000225964 MORC2Q9Y6X9 1032 aaPredicted RBP13.53□□□□□ -0.24
COL1A1-201ENST00000225964 CCDC189A1A4V9 331 aa13.53□□□□□ -0.24
COL1A1-201ENST00000225964 CCDC154A6NI56 674 aa13.53□□□□□ -0.24
COL1A1-201ENST00000225964 ZNF24P17028 368 aa13.53□□□□□ -0.24
COL1A1-201ENST00000225964 CTNNB1P35222 781 aa13.53□□□□□ -0.24
COL1A1-201ENST00000225964 BMPR2Q13873 1038 aa13.53□□□□□ -0.24
COL1A1-201ENST00000225964 SLC45A4Q5BKX6 768 aa13.53□□□□□ -0.24
COL1A1-201ENST00000225964 KCNMB4Q86W47 210 aa13.53□□□□□ -0.24
COL1A1-201ENST00000225964 FBXO39Q8N4B4 442 aa13.53□□□□□ -0.24
COL1A1-201ENST00000225964 REPS2Q8NFH8 660 aa13.53□□□□□ -0.24
COL1A1-201ENST00000225964 FZD1Q9UP38 647 aa13.53□□□□□ -0.24
COL1A1-201ENST00000225964 TRAV19A0A0A6YYK7 116 aa13.53□□□□□ -0.24
COL1A1-201ENST00000225964 HS6ST1O60243 411 aa13.53□□□□□ -0.24
COL1A1-201ENST00000225964 KRT33AO76009 404 aa13.53□□□□□ -0.24
COL1A1-201ENST00000225964 IFNA16P05015 189 aa13.53□□□□□ -0.24
COL1A1-201ENST00000225964 ATP5BP06576 529 aaKnown RBP13.53□□□□□ -0.24
COL1A1-201ENST00000225964 VHLP40337 213 aa13.53□□□□□ -0.24
COL1A1-201ENST00000225964 DDR2Q16832 855 aa13.53□□□□□ -0.24
COL1A1-201ENST00000225964 KLHL24Q6TFL4 600 aa13.53□□□□□ -0.24
COL1A1-201ENST00000225964 CASP12Q6UXS9 341 aa13.53□□□□□ -0.24
COL1A1-201ENST00000225964 AGMOQ6ZNB7 445 aa13.53□□□□□ -0.24
COL1A1-201ENST00000225964 RIPOR1Q6ZS17 1223 aa13.53□□□□□ -0.24
COL1A1-201ENST00000225964 LRRC34Q8IZ02 419 aa13.53□□□□□ -0.24
COL1A1-201ENST00000225964 TMC2Q8TDI7 906 aa13.53□□□□□ -0.24
COL1A1-201ENST00000225964 TATDN2Q93075 761 aa13.53□□□□□ -0.24
COL1A1-201ENST00000225964 RNFT2Q96EX2 444 aa13.53□□□□□ -0.24
COL1A1-201ENST00000225964 RTFDC1Q9BY42 306 aaPredicted RBP13.53□□□□□ -0.24
COL1A1-201ENST00000225964 CES2O00748 559 aa13.53□□□□□ -0.24
COL1A1-201ENST00000225964 CTDNEP1O95476 244 aa13.53□□□□□ -0.24
COL1A1-201ENST00000225964 GSSP48637 474 aa13.53□□□□□ -0.24
COL1A1-201ENST00000225964 STX4Q12846 297 aa13.53□□□□□ -0.24
COL1A1-201ENST00000225964 SPIDRQ14159 915 aa13.53□□□□□ -0.24
COL1A1-201ENST00000225964 ARMCX4Q5H9R4 360 aa13.53□□□□□ -0.24
COL1A1-201ENST00000225964 CLIP3Q96DZ5 547 aa13.53□□□□□ -0.24
COL1A1-201ENST00000225964 UBA2Q9UBT2 640 aaPredicted RBP13.53□□□□□ -0.24
COL1A1-201ENST00000225964 MGAT1P26572 445 aa13.52□□□□□ -0.24
COL1A1-201ENST00000225964 ZNF655Q8N720 491 aaPredicted RBP13.52□□□□□ -0.24
COL1A1-201ENST00000225964 SCAIQ8N9R8 606 aa13.52□□□□□ -0.24
COL1A1-201ENST00000225964 OXCT2Q9BYC2 517 aaPredicted RBP13.52□□□□□ -0.24
COL1A1-201ENST00000225964 MRPL39Q9NYK5 338 aaKnown RBP13.52□□□□□ -0.24
COL1A1-201ENST00000225964 COQ6Q9Y2Z9 468 aa13.52□□□□□ -0.24
COL1A1-201ENST00000225964 AXLP30530 894 aa13.52□□□□□ -0.24
COL1A1-201ENST00000225964 TALDO1P37837 337 aa13.52□□□□□ -0.24
COL1A1-201ENST00000225964 ADCYAP1R1P41586 468 aa13.52□□□□□ -0.24
COL1A1-201ENST00000225964 GPR15P49685 360 aa13.52□□□□□ -0.24
COL1A1-201ENST00000225964 ARMC12Q5T9G4 340 aa13.52□□□□□ -0.24
COL1A1-201ENST00000225964 MILR1Q7Z6M3 343 aa13.52□□□□□ -0.24
COL1A1-201ENST00000225964 SCUBE1Q8IWY4 988 aa13.52□□□□□ -0.24
COL1A1-201ENST00000225964 TMEM199Q8N511 208 aa13.52□□□□□ -0.24
COL1A1-201ENST00000225964 ST13P5Q8NFI4 369 aaPredicted RBP13.52□□□□□ -0.24
COL1A1-201ENST00000225964 GALNT8Q9NY28 637 aa13.52□□□□□ -0.24
COL1A1-201ENST00000225964 NCKIPSDQ9NZQ3 722 aa13.52□□□□□ -0.24
COL1A1-201ENST00000225964 CASZ1Q86V15 1759 aa13.52□□□□□ -0.25
COL1A1-201ENST00000225964 VAV1P15498 845 aa13.52□□□□□ -0.25
COL1A1-201ENST00000225964 IL2P60568 153 aa13.52□□□□□ -0.25
COL1A1-201ENST00000225964 SKP1P63208 163 aa13.52□□□□□ -0.25
COL1A1-201ENST00000225964 MOXD1Q6UVY6 613 aa13.52□□□□□ -0.25
COL1A1-201ENST00000225964 CDCA5Q96FF9 252 aa13.52□□□□□ -0.25
COL1A1-201ENST00000225964 ELOVL4Q9GZR5 314 aa13.52□□□□□ -0.25
COL1A1-201ENST00000225964 NR2E3Q9Y5X4 410 aa13.52□□□□□ -0.25
COL1A1-201ENST00000225964 A0A088AWK7 358 aa13.52□□□□□ -0.25
COL1A1-201ENST00000225964 ERN1O75460 977 aaKnown RBP13.52□□□□□ -0.25
COL1A1-201ENST00000225964 FGRP09769 529 aa13.52□□□□□ -0.25
COL1A1-201ENST00000225964 ZNF10P21506 573 aaPredicted RBP13.52□□□□□ -0.25
COL1A1-201ENST00000225964 SLC1A6P48664 564 aa13.52□□□□□ -0.25
COL1A1-201ENST00000225964 PSMC6P62333 389 aa13.52□□□□□ -0.25
COL1A1-201ENST00000225964 CBWD6Q4V339 395 aa13.52□□□□□ -0.25
COL1A1-201ENST00000225964 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.52□□□□□ -0.25
COL1A1-201ENST00000225964 S100A13Q99584 98 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms