RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 INTS6LQ5JSJ4 861 aaKnown RBP22.59■■□□□ 1.21
SMARCD2-201ENST00000225742 PAQR9Q6ZVX9 377 aa22.59■■□□□ 1.21
SMARCD2-201ENST00000225742 PPP1R10Q96QC0 940 aaKnown RBP22.59■■□□□ 1.21
SMARCD2-201ENST00000225742 MED10Q9BTT4 135 aa22.59■■□□□ 1.21
SMARCD2-201ENST00000225742 RNF19AQ9NV58 838 aa22.59■■□□□ 1.21
SMARCD2-201ENST00000225742 SLC38A7Q9NVC3 462 aa22.59■■□□□ 1.21
SMARCD2-201ENST00000225742 ADAM28Q9UKQ2 775 aa22.59■■□□□ 1.21
SMARCD2-201ENST00000225742 GLTPD2A6NH11 291 aa22.59■■□□□ 1.21
SMARCD2-201ENST00000225742 MTSS1O43312 755 aa22.59■■□□□ 1.21
SMARCD2-201ENST00000225742 POLBP06746 335 aa22.59■■□□□ 1.21
SMARCD2-201ENST00000225742 RPSAP08865 295 aaKnown RBP22.59■■□□□ 1.21
SMARCD2-201ENST00000225742 FAM200BP0CF97 657 aa22.59■■□□□ 1.21
SMARCD2-201ENST00000225742 RARBP10826 455 aa22.59■■□□□ 1.21
SMARCD2-201ENST00000225742 GM2AP17900 193 aa22.59■■□□□ 1.21
SMARCD2-201ENST00000225742 ADRA1BP35368 520 aa22.59■■□□□ 1.21
SMARCD2-201ENST00000225742 GARSP41250 739 aaKnown RBP22.59■■□□□ 1.21
SMARCD2-201ENST00000225742 CLEC20AQ6ZU45 233 aa22.59■■□□□ 1.21
SMARCD2-201ENST00000225742 ARID3BQ8IVW6 561 aaPredicted RBP22.59■■□□□ 1.21
SMARCD2-201ENST00000225742 TMEM86AQ8N2M4 240 aa22.59■■□□□ 1.21
SMARCD2-201ENST00000225742 CCDC33Q8N5R6 958 aa22.59■■□□□ 1.21
SMARCD2-201ENST00000225742 MCUR1Q96AQ8 359 aa22.59■■□□□ 1.21
SMARCD2-201ENST00000225742 TRIM56Q9BRZ2 755 aaKnown RBP22.59■■□□□ 1.21
SMARCD2-201ENST00000225742 PRDM12Q9H4Q4 367 aa22.59■■□□□ 1.21
SMARCD2-201ENST00000225742 FAM96AQ9H5X1 160 aa22.59■■□□□ 1.21
SMARCD2-201ENST00000225742 GOLGA2P5Q9HBQ8 144 aa22.59■■□□□ 1.21
SMARCD2-201ENST00000225742 HBS1LQ9Y450 684 aaKnown RBP22.59■■□□□ 1.21
SMARCD2-201ENST00000225742 LRRC42Q9Y546 428 aa22.59■■□□□ 1.21
SMARCD2-201ENST00000225742 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.58■■□□□ 1.21
SMARCD2-201ENST00000225742 C17orf102A2RUQ5 167 aa22.58■■□□□ 1.21
SMARCD2-201ENST00000225742 CAPN14A8MX76 684 aa22.58■■□□□ 1.21
SMARCD2-201ENST00000225742 TREHO43280 583 aa22.58■■□□□ 1.21
SMARCD2-201ENST00000225742 PSMB4P28070 264 aa22.58■■□□□ 1.21
SMARCD2-201ENST00000225742 GCKP35557 465 aa22.58■■□□□ 1.21
SMARCD2-201ENST00000225742 MORN1Q5T089 497 aa22.58■■□□□ 1.21
SMARCD2-201ENST00000225742 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP22.58■■□□□ 1.21
SMARCD2-201ENST00000225742 ZNF567Q8N184 647 aa22.58■■□□□ 1.21
SMARCD2-201ENST00000225742 CCNYQ8ND76 341 aa22.58■■□□□ 1.21
SMARCD2-201ENST00000225742 PGAP3Q96FM1 320 aaPredicted RBP22.58■■□□□ 1.21
SMARCD2-201ENST00000225742 NMUR2Q9GZQ4 415 aa22.58■■□□□ 1.21
SMARCD2-201ENST00000225742 ERI2A8K979 691 aaKnown RBP22.57■■□□□ 1.2
SMARCD2-201ENST00000225742 LUC7L3O95232 432 aaKnown RBP22.57■■□□□ 1.2
SMARCD2-201ENST00000225742 YBX3P16989 372 aaKnown RBP eCLIP22.57■■□□□ 1.25e-9■□□□□ 10.9
SMARCD2-201ENST00000225742 LHX1P48742 406 aa22.57■■□□□ 1.2
SMARCD2-201ENST00000225742 TKTL1P51854 596 aa22.57■■□□□ 1.2
SMARCD2-201ENST00000225742 SESN2P58004 480 aaPredicted RBP22.57■■□□□ 1.2
SMARCD2-201ENST00000225742 MAP2K5Q13163 448 aa22.57■■□□□ 1.2
SMARCD2-201ENST00000225742 FASTKD1Q53R41 847 aaKnown RBP22.57■■□□□ 1.2
SMARCD2-201ENST00000225742 GRTP1Q5TC63 336 aa22.57■■□□□ 1.2
SMARCD2-201ENST00000225742 WSCD1Q658N2 575 aa22.57■■□□□ 1.2
SMARCD2-201ENST00000225742 RINLQ6ZS11 566 aa22.57■■□□□ 1.2
SMARCD2-201ENST00000225742 ARRDC4Q8NCT1 418 aa22.57■■□□□ 1.2
SMARCD2-201ENST00000225742 PPP1R14CQ8TAE6 165 aa22.57■■□□□ 1.2
SMARCD2-201ENST00000225742 NDRG1Q92597 394 aaKnown RBP22.57■■□□□ 1.2
SMARCD2-201ENST00000225742 ZNF570Q96NI8 536 aa22.57■■□□□ 1.2
SMARCD2-201ENST00000225742 CPNE1Q99829 537 aa22.57■■□□□ 1.2
SMARCD2-201ENST00000225742 CNGB3Q9NQW8 809 aa22.57■■□□□ 1.2
SMARCD2-201ENST00000225742 TAS2R1Q9NYW7 299 aa22.57■■□□□ 1.2
SMARCD2-201ENST00000225742 CLDN5O00501 218 aa22.57■■□□□ 1.2
SMARCD2-201ENST00000225742 PTGESO14684 152 aa22.57■■□□□ 1.2
SMARCD2-201ENST00000225742 CREB3O43889 395 aa22.57■■□□□ 1.2
SMARCD2-201ENST00000225742 MAGEC1O60732 1142 aa22.57■■□□□ 1.2
SMARCD2-201ENST00000225742 ZNF865P0CJ78 1059 aaPredicted RBP22.57■■□□□ 1.2
SMARCD2-201ENST00000225742 SEMA3BQ13214 749 aa22.57■■□□□ 1.2
SMARCD2-201ENST00000225742 MDH1BQ5I0G3 518 aa22.57■■□□□ 1.2
SMARCD2-201ENST00000225742 TMPRSS6Q8IU80 811 aa22.57■■□□□ 1.2
SMARCD2-201ENST00000225742 TEX9Q8N6V9 391 aa22.57■■□□□ 1.2
SMARCD2-201ENST00000225742 PGBD4Q96DM1 585 aa22.57■■□□□ 1.2
SMARCD2-201ENST00000225742 AP5M1Q9H0R1 490 aa22.57■■□□□ 1.2
SMARCD2-201ENST00000225742 ZNF408Q9H9D4 720 aa22.57■■□□□ 1.2
SMARCD2-201ENST00000225742 PIGVQ9NUD9 493 aa22.57■■□□□ 1.2
SMARCD2-201ENST00000225742 PPARGC1AQ9UBK2 798 aaKnown RBP22.57■■□□□ 1.2
SMARCD2-201ENST00000225742 PTCH2Q9Y6C5 1203 aa22.57■■□□□ 1.2
SMARCD2-201ENST00000225742 CCDC195A0A1B0GUA6 201 aa22.56■■□□□ 1.2
SMARCD2-201ENST00000225742 PLIN3O60664 434 aa22.56■■□□□ 1.2
SMARCD2-201ENST00000225742 BEST1O76090 585 aa22.56■■□□□ 1.2
SMARCD2-201ENST00000225742 ALDOAP04075 364 aaKnown RBP22.56■■□□□ 1.2
SMARCD2-201ENST00000225742 ITGA2BP08514 1039 aa22.56■■□□□ 1.2
SMARCD2-201ENST00000225742 GRK2P25098 689 aa22.56■■□□□ 1.2
SMARCD2-201ENST00000225742 HOXC8P31273 242 aa22.56■■□□□ 1.2
SMARCD2-201ENST00000225742 GP5P40197 560 aa22.56■■□□□ 1.2
SMARCD2-201ENST00000225742 AQP5P55064 265 aa22.56■■□□□ 1.2
SMARCD2-201ENST00000225742 DAOAP59103 153 aa22.56■■□□□ 1.2
SMARCD2-201ENST00000225742 PITX1P78337 314 aaPredicted RBP22.56■■□□□ 1.2
SMARCD2-201ENST00000225742 HSF5Q4G112 596 aaPredicted RBP22.56■■□□□ 1.2
SMARCD2-201ENST00000225742 SYPL2Q5VXT5 272 aa22.56■■□□□ 1.2
SMARCD2-201ENST00000225742 SPRYD7Q5W111 196 aa22.56■■□□□ 1.2
SMARCD2-201ENST00000225742 CES4AQ5XG92 561 aa22.56■■□□□ 1.2
SMARCD2-201ENST00000225742 OLFML2BQ68BL8 750 aa22.56■■□□□ 1.2
SMARCD2-201ENST00000225742 MBLAC2Q68D91 279 aa22.56■■□□□ 1.2
SMARCD2-201ENST00000225742 ALYREFQ86V81 257 aaKnown RBP22.56■■□□□ 1.2
SMARCD2-201ENST00000225742 RASSF3Q86WH2 238 aa22.56■■□□□ 1.2
SMARCD2-201ENST00000225742 PRR11Q96HE9 360 aaPredicted RBP22.56■■□□□ 1.2
SMARCD2-201ENST00000225742 LRRC40Q9H9A6 602 aa22.56■■□□□ 1.2
SMARCD2-201ENST00000225742 SYBUQ9NX95 663 aa22.56■■□□□ 1.2
SMARCD2-201ENST00000225742 SEPT10Q9P0V9 454 aa22.56■■□□□ 1.2
SMARCD2-201ENST00000225742 TXNDC16Q9P2K2 825 aa22.56■■□□□ 1.2
SMARCD2-201ENST00000225742 TAGLN3Q9UI15 199 aa22.56■■□□□ 1.2
SMARCD2-201ENST00000225742 TPP1O14773 563 aa22.55■■□□□ 1.2
SMARCD2-201ENST00000225742 CAPN9O14815 690 aa22.55■■□□□ 1.2
SMARCD2-201ENST00000225742 F9P00740 461 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms