RNA–Protein interactions for RNA: ENST00000225655.5

PFN1-201, Transcript of profilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-201ENST00000225655 LATS1O95835 1130 aa18.73■□□□□ 0.59
PFN1-201ENST00000225655 LCP1P13796 627 aa18.73■□□□□ 0.59
PFN1-201ENST00000225655 DAOAP59103 153 aa18.73■□□□□ 0.59
PFN1-201ENST00000225655 EIF4HQ15056 248 aaKnown RBP18.73■□□□□ 0.59
PFN1-201ENST00000225655 N4BP2L1Q5TBK1 243 aaPredicted RBP18.73■□□□□ 0.59
PFN1-201ENST00000225655 CNGA4Q8IV77 575 aa18.73■□□□□ 0.59
PFN1-201ENST00000225655 MSANTD4Q8NCY6 345 aa18.73■□□□□ 0.59
PFN1-201ENST00000225655 IRGQQ8WZA9 623 aa18.73■□□□□ 0.59
PFN1-201ENST00000225655 NUSAP1Q9BXS6 441 aaKnown RBP18.73■□□□□ 0.59
PFN1-201ENST00000225655 SFMBT1Q9UHJ3 866 aa18.73■□□□□ 0.59
PFN1-201ENST00000225655 CLEC4EQ9ULY5 219 aa18.73■□□□□ 0.59
PFN1-201ENST00000225655 PCDHGC3Q9UN70 934 aa18.73■□□□□ 0.59
PFN1-201ENST00000225655 BZW2Q9Y6E2 419 aaKnown RBP18.73■□□□□ 0.59
PFN1-201ENST00000225655 LAMA1P25391 3075 aa18.72■□□□□ 0.59
PFN1-201ENST00000225655 LSM8O95777 96 aaKnown RBP18.72■□□□□ 0.59
PFN1-201ENST00000225655 GYPCP04921 128 aa18.72■□□□□ 0.59
PFN1-201ENST00000225655 ITPKAP23677 461 aa18.72■□□□□ 0.59
PFN1-201ENST00000225655 CASP14P31944 242 aa18.72■□□□□ 0.59
PFN1-201ENST00000225655 CDR2Q01850 454 aa18.72■□□□□ 0.59
PFN1-201ENST00000225655 STARD3Q14849 445 aa18.72■□□□□ 0.59
PFN1-201ENST00000225655 MPPE1Q53F39 396 aa18.72■□□□□ 0.59
PFN1-201ENST00000225655 ADGRF1Q5T601 910 aa18.72■□□□□ 0.59
PFN1-201ENST00000225655 PMF1Q6P1K2 205 aa18.72■□□□□ 0.59
PFN1-201ENST00000225655 MSANTD2Q6P1R3 559 aa18.72■□□□□ 0.59
PFN1-201ENST00000225655 SLC23A3Q6PIS1 610 aa18.72■□□□□ 0.59
PFN1-201ENST00000225655 TRIM72Q6ZMU5 477 aa18.72■□□□□ 0.59
PFN1-201ENST00000225655 VPS36Q86VN1 386 aa18.72■□□□□ 0.59
PFN1-201ENST00000225655 TMEM35BQ8NCS4 154 aa18.72■□□□□ 0.59
PFN1-201ENST00000225655 EPS8L1Q8TE68 723 aa18.72■□□□□ 0.59
PFN1-201ENST00000225655 ERLEC1Q96DZ1 483 aa18.72■□□□□ 0.59
PFN1-201ENST00000225655 LHX5Q9H2C1 402 aa18.72■□□□□ 0.59
PFN1-201ENST00000225655 GRPEL1Q9HAV7 217 aa18.72■□□□□ 0.59
PFN1-201ENST00000225655 ELOVL2Q9NXB9 296 aa18.72■□□□□ 0.59
PFN1-201ENST00000225655 AIPL1Q9NZN9 384 aa18.72■□□□□ 0.59
PFN1-201ENST00000225655 CYP8B1Q9UNU6 501 aa18.72■□□□□ 0.59
PFN1-201ENST00000225655 TIMM44O43615 452 aa18.71■□□□□ 0.59
PFN1-201ENST00000225655 ADCY5O95622 1261 aa18.71■□□□□ 0.59
PFN1-201ENST00000225655 HOXD9P28356 352 aaPredicted RBP18.71■□□□□ 0.59
PFN1-201ENST00000225655 PMLP29590 882 aa18.71■□□□□ 0.59
PFN1-201ENST00000225655 CDC25BP30305 580 aa18.71■□□□□ 0.59
PFN1-201ENST00000225655 IL12RB1P42701 662 aa18.71■□□□□ 0.59
PFN1-201ENST00000225655 ACADSBP45954 432 aa18.71■□□□□ 0.59
PFN1-201ENST00000225655 RGS7P49802 495 aa18.71■□□□□ 0.59
PFN1-201ENST00000225655 ZNF33AQ06730 810 aa18.71■□□□□ 0.59
PFN1-201ENST00000225655 KLHL30Q0D2K2 578 aa18.71■□□□□ 0.59
PFN1-201ENST00000225655 FUT11Q495W5 492 aa18.71■□□□□ 0.59
PFN1-201ENST00000225655 TAF3Q5VWG9 929 aa18.71■□□□□ 0.59
PFN1-201ENST00000225655 PSAPL1Q6NUJ1 521 aa18.71■□□□□ 0.59
PFN1-201ENST00000225655 RABEPKQ7Z6M1 372 aa18.71■□□□□ 0.59
PFN1-201ENST00000225655 NOP9Q86U38 636 aaKnown RBP18.71■□□□□ 0.59
PFN1-201ENST00000225655 METTL3Q86U44 580 aaKnown RBP18.71■□□□□ 0.59
PFN1-201ENST00000225655 CEP76Q8TAP6 659 aa18.71■□□□□ 0.59
PFN1-201ENST00000225655 HSFY1Q96LI6 401 aa18.71■□□□□ 0.59
PFN1-201ENST00000225655 MIS12Q9H081 205 aa18.71■□□□□ 0.59
PFN1-201ENST00000225655 SLC6A17Q9H1V8 727 aa18.71■□□□□ 0.59
PFN1-201ENST00000225655 ACP6Q9NPH0 428 aa18.71■□□□□ 0.59
PFN1-201ENST00000225655 SEPT11Q9NVA2 429 aaKnown RBP18.71■□□□□ 0.59
PFN1-201ENST00000225655 ATXN2Q99700 1313 aaKnown RBP18.71■□□□□ 0.59
PFN1-201ENST00000225655 CKAP5Q14008 2032 aa18.71■□□□□ 0.59
PFN1-201ENST00000225655 AKR1B15C9JRZ8 316 aaPredicted RBP18.7■□□□□ 0.58
PFN1-201ENST00000225655 MSI1O43347 362 aaKnown RBP18.7■□□□□ 0.58
PFN1-201ENST00000225655 FBXO21O94952 628 aa18.7■□□□□ 0.58
PFN1-201ENST00000225655 CALCAP01258 141 aa18.7■□□□□ 0.58
PFN1-201ENST00000225655 IGLV3-27P01718 113 aa18.7■□□□□ 0.58
PFN1-201ENST00000225655 ENGP17813 658 aa18.7■□□□□ 0.58
PFN1-201ENST00000225655 ZNF234Q14588 700 aa18.7■□□□□ 0.58
PFN1-201ENST00000225655 DUOXA1Q1HG43 343 aa18.7■□□□□ 0.58
PFN1-201ENST00000225655 TDRD12Q587J7 1177 aaKnown RBP18.7■□□□□ 0.58
PFN1-201ENST00000225655 PPP1R2P3Q6NXS1 205 aa18.7■□□□□ 0.58
PFN1-201ENST00000225655 DENND1BQ6P3S1 775 aa18.7■□□□□ 0.58
PFN1-201ENST00000225655 KIAA1324Q6UXG2 1013 aaKnown RBP18.7■□□□□ 0.58
PFN1-201ENST00000225655 DEFB119Q8N690 84 aa18.7■□□□□ 0.58
PFN1-201ENST00000225655 OR8K1Q8NGG5 319 aa18.7■□□□□ 0.58
PFN1-201ENST00000225655 STK32AQ8WU08 396 aa18.7■□□□□ 0.58
PFN1-201ENST00000225655 SYNCQ9H7C4 482 aa18.7■□□□□ 0.58
PFN1-201ENST00000225655 ST7Q9NRC1 585 aa18.7■□□□□ 0.58
PFN1-201ENST00000225655 EPG5Q9HCE0 2579 aa18.7■□□□□ 0.58
PFN1-201ENST00000225655 PIK3R2O00459 728 aa18.69■□□□□ 0.58
PFN1-201ENST00000225655 SYNCRIPO60506 623 aaKnown RBP18.69■□□□□ 0.58
PFN1-201ENST00000225655 MFAP3LO75121 409 aa18.69■□□□□ 0.58
PFN1-201ENST00000225655 LTFP02788 710 aa18.69■□□□□ 0.58
PFN1-201ENST00000225655 SERPINF2P08697 491 aa18.69■□□□□ 0.58
PFN1-201ENST00000225655 CSRP1P21291 193 aaKnown RBP18.69■□□□□ 0.58
PFN1-201ENST00000225655 NOVA1P51513 510 aaKnown RBP18.69■□□□□ 0.58
PFN1-201ENST00000225655 SHC2P98077 582 aa18.69■□□□□ 0.58
PFN1-201ENST00000225655 TMEM215Q68D42 235 aa18.69■□□□□ 0.58
PFN1-201ENST00000225655 PASD1Q8IV76 773 aa18.69■□□□□ 0.58
PFN1-201ENST00000225655 SLC41A1Q8IVJ1 513 aa18.69■□□□□ 0.58
PFN1-201ENST00000225655 GOLGA1Q92805 767 aa18.69■□□□□ 0.58
PFN1-201ENST00000225655 TMA16Q96EY4 203 aaKnown RBP18.69■□□□□ 0.58
PFN1-201ENST00000225655 ZNF419Q96HQ0 510 aaPredicted RBP18.69■□□□□ 0.58
PFN1-201ENST00000225655 AGPAT1Q99943 283 aa18.69■□□□□ 0.58
PFN1-201ENST00000225655 IRX2Q9BZI1 471 aaPredicted RBP18.69■□□□□ 0.58
PFN1-201ENST00000225655 CIPCQ9C0C6 399 aa18.69■□□□□ 0.58
PFN1-201ENST00000225655 PRDM16Q9HAZ2 1276 aa18.69■□□□□ 0.58
PFN1-201ENST00000225655 CD93Q9NPY3 652 aa18.69■□□□□ 0.58
PFN1-201ENST00000225655 NOCTQ9UK39 431 aaKnown RBP18.69■□□□□ 0.58
PFN1-201ENST00000225655 ANGPTL2Q9UKU9 493 aa18.69■□□□□ 0.58
PFN1-201ENST00000225655 SLC6A14Q9UN76 642 aa18.69■□□□□ 0.58
PFN1-201ENST00000225655 CHD8Q9HCK8 2581 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms