RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 PHF21BQ96EK2 531 aa11.78□□□□□ -0.52
NOD1-201ENST00000222823 VPS50Q96JG6 964 aa11.78□□□□□ -0.52
NOD1-201ENST00000222823 SRPK1Q96SB4 655 aaKnown RBP11.78□□□□□ -0.52
NOD1-201ENST00000222823 ULBP1Q9BZM6 244 aa11.78□□□□□ -0.52
NOD1-201ENST00000222823 GIMAP4Q9NUV9 329 aa11.78□□□□□ -0.52
NOD1-201ENST00000222823 SMPD4Q9NXE4 827 aa11.78□□□□□ -0.52
NOD1-201ENST00000222823 DDX20Q9UHI6 824 aaKnown RBP11.78□□□□□ -0.52
NOD1-201ENST00000222823 AGPSO00116 658 aa11.78□□□□□ -0.52
NOD1-201ENST00000222823 ALOX15P16050 662 aaPredicted RBP11.78□□□□□ -0.52
NOD1-201ENST00000222823 YWHAQP27348 245 aa11.78□□□□□ -0.52
NOD1-201ENST00000222823 DRG2P55039 364 aaKnown RBP11.78□□□□□ -0.52
NOD1-201ENST00000222823 ITGB3BPQ13352 177 aaPredicted RBP11.78□□□□□ -0.52
NOD1-201ENST00000222823 CELF3Q5SZQ8 465 aaKnown RBP11.78□□□□□ -0.52
NOD1-201ENST00000222823 BBS7Q8IWZ6 715 aa11.78□□□□□ -0.52
NOD1-201ENST00000222823 MICU2Q8IYU8 434 aa11.78□□□□□ -0.52
NOD1-201ENST00000222823 FAM9CQ8IZT9 166 aa11.78□□□□□ -0.52
NOD1-201ENST00000222823 RASGEF1CQ8N431 466 aa11.78□□□□□ -0.52
NOD1-201ENST00000222823 STX19Q8N4C7 294 aa11.78□□□□□ -0.52
NOD1-201ENST00000222823 UNKQ9C0B0 810 aaKnown RBP11.78□□□□□ -0.52
NOD1-201ENST00000222823 POPDC2Q9HBU9 364 aa11.78□□□□□ -0.52
NOD1-201ENST00000222823 CD248Q9HCU0 757 aa11.78□□□□□ -0.52
NOD1-201ENST00000222823 TCF7L2Q9NQB0 619 aa11.78□□□□□ -0.52
NOD1-201ENST00000222823 TNFSF13BQ9Y275 285 aa11.78□□□□□ -0.52
NOD1-201ENST00000222823 RAD54BQ9Y620 910 aa11.78□□□□□ -0.52
NOD1-201ENST00000222823 WDR27A2RRH5 827 aa11.78□□□□□ -0.52
NOD1-201ENST00000222823 SIGLEC16A6NMB1 481 aa11.78□□□□□ -0.52
NOD1-201ENST00000222823 SERPINE1P05121 402 aa11.78□□□□□ -0.52
NOD1-201ENST00000222823 ZSCAN5DPP0CG00 497 aa11.78□□□□□ -0.52
NOD1-201ENST00000222823 NPY2RP49146 381 aa11.78□□□□□ -0.52
NOD1-201ENST00000222823 PEX5P50542 639 aa11.78□□□□□ -0.52
NOD1-201ENST00000222823 HPCAP84074 193 aa11.78□□□□□ -0.52
NOD1-201ENST00000222823 PRKAA1Q13131 559 aa11.78□□□□□ -0.52
NOD1-201ENST00000222823 DPYSL3Q14195 570 aa11.78□□□□□ -0.52
NOD1-201ENST00000222823 AGKQ53H12 422 aa11.78□□□□□ -0.52
NOD1-201ENST00000222823 TTC33Q6PID6 262 aaPredicted RBP11.78□□□□□ -0.52
NOD1-201ENST00000222823 CES3Q6UWW8 571 aa11.78□□□□□ -0.52
NOD1-201ENST00000222823 C11orf96Q7Z7L8 435 aa11.78□□□□□ -0.52
NOD1-201ENST00000222823 KCNMB4Q86W47 210 aa11.78□□□□□ -0.52
NOD1-201ENST00000222823 UNC93AQ86WB7 457 aa11.78□□□□□ -0.52
NOD1-201ENST00000222823 HOMEZQ8IX15 550 aa11.78□□□□□ -0.52
NOD1-201ENST00000222823 ACTR8Q9H981 624 aa11.78□□□□□ -0.52
NOD1-201ENST00000222823 ATP13A1Q9HD20 1204 aa11.78□□□□□ -0.52
NOD1-201ENST00000222823 RNF19AQ9NV58 838 aa11.78□□□□□ -0.52
NOD1-201ENST00000222823 SLC25A13Q9UJS0 675 aa11.78□□□□□ -0.52
NOD1-201ENST00000222823 PCDHA2Q9Y5H9 948 aa11.78□□□□□ -0.52
NOD1-201ENST00000222823 SNX13Q9Y5W8 968 aa11.78□□□□□ -0.52
NOD1-201ENST00000222823 SNCAIPQ9Y6H5 919 aa11.78□□□□□ -0.52
NOD1-201ENST00000222823 ITGB4P16144 1822 aa11.78□□□□□ -0.52
NOD1-201ENST00000222823 KANSL1LA0AUZ9 987 aa11.78□□□□□ -0.52
NOD1-201ENST00000222823 ENO4A6NNW6 628 aa11.78□□□□□ -0.52
NOD1-201ENST00000222823 SHOX2O60902 331 aaPredicted RBP11.78□□□□□ -0.52
NOD1-201ENST00000222823 USP12O75317 370 aa11.78□□□□□ -0.52
NOD1-201ENST00000222823 DEAF1O75398 565 aaPredicted RBP11.78□□□□□ -0.52
NOD1-201ENST00000222823 BDNFP23560 247 aa11.78□□□□□ -0.52
NOD1-201ENST00000222823 CLK1P49759 484 aaKnown RBP11.78□□□□□ -0.52
NOD1-201ENST00000222823 NFYCQ13952 458 aa11.78□□□□□ -0.52
NOD1-201ENST00000222823 SHROOM1Q2M3G4 852 aaPredicted RBP11.78□□□□□ -0.52
NOD1-201ENST00000222823 ZACNQ401N2 412 aa11.78□□□□□ -0.52
NOD1-201ENST00000222823 PLD3Q8IV08 490 aa11.78□□□□□ -0.52
NOD1-201ENST00000222823 LRRC57Q8N9N7 239 aa11.78□□□□□ -0.52
NOD1-201ENST00000222823 TDRD5Q8NAT2 981 aaKnown RBP11.78□□□□□ -0.52
NOD1-201ENST00000222823 SOCS4Q8WXH5 440 aa11.78□□□□□ -0.52
NOD1-201ENST00000222823 VAT1Q99536 393 aa11.78□□□□□ -0.52
NOD1-201ENST00000222823 TINF2Q9BSI4 451 aa11.78□□□□□ -0.52
NOD1-201ENST00000222823 GPRC5DQ9NZD1 345 aa11.78□□□□□ -0.52
NOD1-201ENST00000222823 CCDC88AQ3V6T2 1871 aa11.77□□□□□ -0.52
NOD1-201ENST00000222823 TBKBP1A7MCY6 615 aa11.77□□□□□ -0.52
NOD1-201ENST00000222823 M0R3G1 203 aa11.77□□□□□ -0.52
NOD1-201ENST00000222823 UBDO15205 165 aa11.77□□□□□ -0.52
NOD1-201ENST00000222823 TBC1D12O60347 775 aa11.77□□□□□ -0.52
NOD1-201ENST00000222823 HSPA13P48723 471 aa11.77□□□□□ -0.52
NOD1-201ENST00000222823 RAP1GDS1P52306 607 aa11.77□□□□□ -0.52
NOD1-201ENST00000222823 JAM2P57087 298 aa11.77□□□□□ -0.52
NOD1-201ENST00000222823 FAAP100Q0VG06 881 aa11.77□□□□□ -0.52
NOD1-201ENST00000222823 MAMLD1Q13495 774 aa11.77□□□□□ -0.52
NOD1-201ENST00000222823 ACBD5Q5T8D3 534 aaPredicted RBP11.77□□□□□ -0.52
NOD1-201ENST00000222823 ZNF470Q6ECI4 717 aa11.77□□□□□ -0.52
NOD1-201ENST00000222823 AADACL2Q6P093 401 aa11.77□□□□□ -0.52
NOD1-201ENST00000222823 SLC30A9Q6PML9 568 aa11.77□□□□□ -0.52
NOD1-201ENST00000222823 SLC22A9Q8IVM8 553 aa11.77□□□□□ -0.52
NOD1-201ENST00000222823 ZCCHC9Q8N567 271 aaKnown RBP11.77□□□□□ -0.52
NOD1-201ENST00000222823 ATXN2LQ8WWM7 1075 aaKnown RBP11.77□□□□□ -0.52
NOD1-201ENST00000222823 LRRC39Q96DD0 335 aa11.77□□□□□ -0.52
NOD1-201ENST00000222823 SAE1Q9UBE0 346 aaPredicted RBP11.77□□□□□ -0.52
NOD1-201ENST00000222823 ZNF229Q9UJW7 825 aa11.77□□□□□ -0.52
NOD1-201ENST00000222823 HACD1B0YJ81 288 aa11.77□□□□□ -0.53
NOD1-201ENST00000222823 SPTLC1O15269 473 aa11.77□□□□□ -0.53
NOD1-201ENST00000222823 CALCAP01258 141 aa11.77□□□□□ -0.53
NOD1-201ENST00000222823 CCDC130P13994 396 aa11.77□□□□□ -0.53
NOD1-201ENST00000222823 ZNF23P17027 643 aa11.77□□□□□ -0.53
NOD1-201ENST00000222823 NOS2P35228 1153 aa11.77□□□□□ -0.53
NOD1-201ENST00000222823 C15orf59Q2T9L4 293 aaPredicted RBP11.77□□□□□ -0.53
NOD1-201ENST00000222823 ATP6AP1LQ52LC2 224 aa11.77□□□□□ -0.53
NOD1-201ENST00000222823 UMODL1Q5DID0 1318 aa11.77□□□□□ -0.53
NOD1-201ENST00000222823 OTOAQ7RTW8 1153 aa11.77□□□□□ -0.53
NOD1-201ENST00000222823 ADCK1Q86TW2 530 aa11.77□□□□□ -0.53
NOD1-201ENST00000222823 LPCAT1Q8NF37 534 aa11.77□□□□□ -0.53
NOD1-201ENST00000222823 B4GALNT2Q8NHY0 566 aa11.77□□□□□ -0.53
NOD1-201ENST00000222823 APOPT1Q96IL0 206 aa11.77□□□□□ -0.53
NOD1-201ENST00000222823 ADAM2Q99965 735 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms