RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 CYP2F1P24903 491 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 RPL21P46778 160 aaKnown RBP4.51□□□□□ -1.69
CHD9-201ENST00000219084 LRRC74AQ0VAA2 488 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 PKN1Q16512 942 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 NFE2Q16621 373 aaPredicted RBP4.51□□□□□ -1.69
CHD9-201ENST00000219084 CCDC142Q17RM4 750 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 MZT2BQ6NZ67 158 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 KCNMB4Q86W47 210 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 GJD3Q8N144 294 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 DEPDC4Q8N2C3 294 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 IPMKQ8NFU5 416 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 RFWD2Q8NHY2 731 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 MIEF2Q96C03 454 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 FAM163AQ96GL9 167 aaPredicted RBP4.51□□□□□ -1.69
CHD9-201ENST00000219084 SMARCD1Q96GM5 515 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 MPP4Q96JB8 637 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 TRIM8Q9BZR9 551 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 PLGRKTQ9HBL7 147 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 CNGB3Q9NQW8 809 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 SRP68Q9UHB9 627 aaKnown RBP4.51□□□□□ -1.69
CHD9-201ENST00000219084 MCM8Q9UJA3 840 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 STOML2Q9UJZ1 356 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 F5H5T6 163 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 FCHO1O14526 889 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 AKAP3O75969 853 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 IDO1P14902 403 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 GRK3P35626 688 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 NEK3P51956 506 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 PTPN11Q06124 597 aaPredicted RBP4.51□□□□□ -1.69
CHD9-201ENST00000219084 PRKG1Q13976 671 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 PSMD5Q16401 504 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 INO80DQ53TQ3 878 aaPredicted RBP4.51□□□□□ -1.69
CHD9-201ENST00000219084 MTX3Q5HYI7 312 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 INTS11Q5TA45 600 aaKnown RBP4.51□□□□□ -1.69
CHD9-201ENST00000219084 THEMIS2Q5TEJ8 643 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 EFCAB12Q6NXP0 572 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 MZT2AQ6P582 158 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 GLB1LQ6UWU2 654 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 DNAJB7Q7Z6W7 309 aaPredicted RBP4.51□□□□□ -1.69
CHD9-201ENST00000219084 PSTKQ8IV42 348 aaKnown RBP4.51□□□□□ -1.69
CHD9-201ENST00000219084 HTR3CQ8WXA8 447 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 ATXN7L3BQ96GX2 97 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 ALG13Q9NP73 1137 aaKnown RBP4.51□□□□□ -1.69
CHD9-201ENST00000219084 ADPRHL2Q9NX46 363 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 DNAJC16Q9Y2G8 782 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 MYH14Q7Z406 1995 aaKnown RBP4.51□□□□□ -1.69
CHD9-201ENST00000219084 QSOX1O00391 747 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 DPYSL4O14531 572 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 PHGDHO43175 533 aaKnown RBP4.51□□□□□ -1.69
CHD9-201ENST00000219084 ZNF862O60290 1169 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 SNX3O60493 162 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 ITGALP20701 1170 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 CHI3L1P36222 383 aaPredicted RBP4.51□□□□□ -1.69
CHD9-201ENST00000219084 ARHGAP15Q53QZ3 475 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 TTC23Q5W5X9 447 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 DENND5BQ6ZUT9 1274 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 ZDHHC13Q8IUH4 622 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 C12orf56Q8IXR9 622 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 ETNPPLQ8TBG4 499 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 THUMPD3Q9BV44 507 aaKnown RBP4.51□□□□□ -1.69
CHD9-201ENST00000219084 LACRTQ9GZZ8 138 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 SIK2Q9H0K1 926 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 TDRD3Q9H7E2 651 aaKnown RBP4.51□□□□□ -1.69
CHD9-201ENST00000219084 VTA1Q9NP79 307 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 CISHQ9NSE2 258 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 AKAP7Q9P0M2 348 aaPredicted RBP4.51□□□□□ -1.69
CHD9-201ENST00000219084 KANSL3Q9P2N6 904 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 KLHL20Q9Y2M5 609 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 C4AP0C0L4 1744 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 C4BP0C0L5 1744 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 NFASCO94856 1347 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 ANKRD65E5RJM6 399 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 RGS14O43566 566 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 CETPP11597 493 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 CPB1P15086 417 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 ATP6V1B1P15313 513 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 GCLCP48506 637 aaPredicted RBP4.51□□□□□ -1.69
CHD9-201ENST00000219084 ALDH5A1P51649 535 aaPredicted RBP4.51□□□□□ -1.69
CHD9-201ENST00000219084 NFYCQ13952 458 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 FASTKQ14296 549 aaKnown RBP4.51□□□□□ -1.69
CHD9-201ENST00000219084 FAM187BQ17R55 369 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 SMTNL2Q2TAL5 461 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 PRR5LQ6MZQ0 368 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 PMF1Q6P1K2 205 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 UNC93AQ86WB7 457 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 ADGRF2Q8IZF7 708 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 C12orf50Q8NA57 414 aaPredicted RBP4.51□□□□□ -1.69
CHD9-201ENST00000219084 RNF217Q8TC41 542 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 LRRC4BQ9NT99 713 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 FAM205CA6NFA0 338 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 KCNH1O95259 989 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 SGPL1O95470 568 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 RAG1P15918 1043 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 MYL12AP19105 171 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 CYP2A7P20853 494 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 PPIBP23284 216 aaKnown RBP4.51□□□□□ -1.69
CHD9-201ENST00000219084 IL12RB1P42701 662 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 PSEN1P49768 467 aa4.51□□□□□ -1.69
CHD9-201ENST00000219084 CSE1LP55060 971 aaKnown RBP4.51□□□□□ -1.69
CHD9-201ENST00000219084 CSNK2BP67870 215 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms