RNA–Protein interactions for RNA: ENST00000217381.2

SNTA1-201, Transcript of syntrophin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNTA1, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNTA1-201ENST00000217381 FAM49AQ9H0Q0 323 aaPredicted RBP24.86■■□□□ 1.57
SNTA1-201ENST00000217381 UBQLN1Q9UMX0 589 aaKnown RBP24.86■■□□□ 1.57
SNTA1-201ENST00000217381 GLUD2P49448 558 aa24.85■■□□□ 1.57
SNTA1-201ENST00000217381 AP1B1Q10567 949 aa24.85■■□□□ 1.57
SNTA1-201ENST00000217381 DUSP28Q4G0W2 176 aa24.85■■□□□ 1.57
SNTA1-201ENST00000217381 EFHC1Q5JVL4 640 aa24.85■■□□□ 1.57
SNTA1-201ENST00000217381 OTUD1Q5VV17 481 aaPredicted RBP24.85■■□□□ 1.57
SNTA1-201ENST00000217381 RFX8Q6ZV50 586 aa24.85■■□□□ 1.57
SNTA1-201ENST00000217381 WDR75Q8IWA0 830 aaKnown RBP24.85■■□□□ 1.57
SNTA1-201ENST00000217381 ULK2Q8IYT8 1036 aa24.85■■□□□ 1.57
SNTA1-201ENST00000217381 GTF3C2Q8WUA4 911 aaPredicted RBP24.85■■□□□ 1.57
SNTA1-201ENST00000217381 CEP41Q9BYV8 373 aa24.85■■□□□ 1.57
SNTA1-201ENST00000217381 DNAJC16Q9Y2G8 782 aa24.85■■□□□ 1.57
SNTA1-201ENST00000217381 NEBLO76041 1014 aa24.85■■□□□ 1.57
SNTA1-201ENST00000217381 LINGO3P0C6S8 592 aa24.85■■□□□ 1.57
SNTA1-201ENST00000217381 AOC1P19801 751 aa24.85■■□□□ 1.57
SNTA1-201ENST00000217381 KCNA4P22459 653 aa24.85■■□□□ 1.57
SNTA1-201ENST00000217381 KLC1Q07866 573 aa24.85■■□□□ 1.57
SNTA1-201ENST00000217381 PCLAFQ15004 111 aa24.85■■□□□ 1.57
SNTA1-201ENST00000217381 NOTUMQ6P988 496 aa24.85■■□□□ 1.57
SNTA1-201ENST00000217381 PSTKQ8IV42 348 aaKnown RBP24.85■■□□□ 1.57
SNTA1-201ENST00000217381 NDRG1Q92597 394 aaKnown RBP24.85■■□□□ 1.57
SNTA1-201ENST00000217381 CLPTM1LQ96KA5 538 aa24.85■■□□□ 1.57
SNTA1-201ENST00000217381 APOL6Q9BWW8 343 aa24.85■■□□□ 1.57
SNTA1-201ENST00000217381 C1orf21Q9H246 121 aa24.85■■□□□ 1.57
SNTA1-201ENST00000217381 SORCS3Q9UPU3 1222 aa24.85■■□□□ 1.57
SNTA1-201ENST00000217381 LRCH1Q9Y2L9 728 aa24.85■■□□□ 1.57
SNTA1-201ENST00000217381 WASF2Q9Y6W5 498 aa24.85■■□□□ 1.57
SNTA1-201ENST00000217381 KPNA7A9QM74 516 aa24.84■■□□□ 1.57
SNTA1-201ENST00000217381 PRKCGP05129 697 aa24.84■■□□□ 1.57
SNTA1-201ENST00000217381 ITGA2BP08514 1039 aa24.84■■□□□ 1.57
SNTA1-201ENST00000217381 PSMB4P28070 264 aa24.84■■□□□ 1.57
SNTA1-201ENST00000217381 TKTP29401 623 aaKnown RBP24.84■■□□□ 1.57
SNTA1-201ENST00000217381 SLC1A6P48664 564 aa24.84■■□□□ 1.57
SNTA1-201ENST00000217381 RNF139Q8WU17 664 aa24.84■■□□□ 1.57
SNTA1-201ENST00000217381 PANX3Q96QZ0 392 aa24.84■■□□□ 1.57
SNTA1-201ENST00000217381 PRDM16Q9HAZ2 1276 aa24.84■■□□□ 1.57
SNTA1-201ENST00000217381 TMPRSS4Q9NRS4 437 aa24.84■■□□□ 1.57
SNTA1-201ENST00000217381 SYBUQ9NX95 663 aa24.84■■□□□ 1.57
SNTA1-201ENST00000217381 PDHXO00330 501 aa24.84■■□□□ 1.57
SNTA1-201ENST00000217381 STK10O94804 968 aaKnown RBP24.84■■□□□ 1.57
SNTA1-201ENST00000217381 AKAP5P24588 427 aa24.84■■□□□ 1.57
SNTA1-201ENST00000217381 PITX1P78337 314 aaPredicted RBP24.84■■□□□ 1.57
SNTA1-201ENST00000217381 TRMT5Q32P41 509 aaKnown RBP24.84■■□□□ 1.57
SNTA1-201ENST00000217381 OR6J1Q8NGC5 347 aa24.84■■□□□ 1.57
SNTA1-201ENST00000217381 ATP2A3Q93084 1043 aa24.84■■□□□ 1.57
SNTA1-201ENST00000217381 OSMRQ99650 979 aa24.84■■□□□ 1.57
SNTA1-201ENST00000217381 THTPAQ9BU02 230 aa24.84■■□□□ 1.57
SNTA1-201ENST00000217381 SNX25Q9H3E2 840 aa24.84■■□□□ 1.57
SNTA1-201ENST00000217381 STN1Q9H668 368 aaKnown RBP24.84■■□□□ 1.57
SNTA1-201ENST00000217381 GDAP2Q9NXN4 497 aa24.84■■□□□ 1.57
SNTA1-201ENST00000217381 DCDC2Q9UHG0 476 aa24.84■■□□□ 1.57
SNTA1-201ENST00000217381 SLC7A8Q9UHI5 535 aa24.84■■□□□ 1.57
SNTA1-201ENST00000217381 ZNF638Q14966 1978 aaKnown RBP24.83■■□□□ 1.57
SNTA1-201ENST00000217381 XPO1O14980 1071 aaKnown RBP24.83■■□□□ 1.57
SNTA1-201ENST00000217381 RABGAP1LQ5R372 815 aa24.83■■□□□ 1.57
SNTA1-201ENST00000217381 BSPRYQ5W0U4 402 aa24.83■■□□□ 1.57
SNTA1-201ENST00000217381 RIPOR1Q6ZS17 1223 aa24.83■■□□□ 1.57
SNTA1-201ENST00000217381 USP50Q70EL3 339 aaPredicted RBP24.83■■□□□ 1.57
SNTA1-201ENST00000217381 FAM149B1Q96BN6 582 aa24.83■■□□□ 1.57
SNTA1-201ENST00000217381 NAT9Q9BTE0 207 aa24.83■■□□□ 1.57
SNTA1-201ENST00000217381 DPPA5A6NC42 116 aa24.83■■□□□ 1.56
SNTA1-201ENST00000217381 DAB1O75553 588 aa24.83■■□□□ 1.56
SNTA1-201ENST00000217381 ADIGQ0VDE8 80 aa24.83■■□□□ 1.56
SNTA1-201ENST00000217381 DGKDQ16760 1214 aa24.83■■□□□ 1.56
SNTA1-201ENST00000217381 IRGCQ6NXR0 463 aa24.83■■□□□ 1.56
SNTA1-201ENST00000217381 ATG14Q6ZNE5 492 aa24.83■■□□□ 1.56
SNTA1-201ENST00000217381 PIGZQ86VD9 579 aa24.83■■□□□ 1.56
SNTA1-201ENST00000217381 ZNF567Q8N184 647 aa24.83■■□□□ 1.56
SNTA1-201ENST00000217381 ZC3H15Q8WU90 426 aaKnown RBP24.83■■□□□ 1.56
SNTA1-201ENST00000217381 SF3B1O75533 1304 aaKnown RBP eCLIP24.82■■□□□ 1.56
SNTA1-201ENST00000217381 PROCP04070 461 aa24.82■■□□□ 1.56
SNTA1-201ENST00000217381 SERPINE1P05121 402 aa24.82■■□□□ 1.56
SNTA1-201ENST00000217381 CPOXP36551 454 aa24.82■■□□□ 1.56
SNTA1-201ENST00000217381 ACTR3P61158 418 aa24.82■■□□□ 1.56
SNTA1-201ENST00000217381 DCAF6Q58WW2 860 aa24.82■■□□□ 1.56
SNTA1-201ENST00000217381 BNIPLQ7Z465 357 aa24.82■■□□□ 1.56
SNTA1-201ENST00000217381 LIMS2Q7Z4I7 341 aa24.82■■□□□ 1.56
SNTA1-201ENST00000217381 MAML3Q96JK9 1138 aa24.82■■□□□ 1.56
SNTA1-201ENST00000217381 ZNF560Q96MR9 790 aa24.82■■□□□ 1.56
SNTA1-201ENST00000217381 KRT82Q9NSB4 513 aa24.82■■□□□ 1.56
SNTA1-201ENST00000217381 IL1RAPL1Q9NZN1 696 aa24.82■■□□□ 1.56
SNTA1-201ENST00000217381 SEPT10Q9P0V9 454 aa24.82■■□□□ 1.56
SNTA1-201ENST00000217381 CIB2O75838 187 aa24.81■■□□□ 1.56
SNTA1-201ENST00000217381 CD4P01730 458 aa24.81■■□□□ 1.56
SNTA1-201ENST00000217381 SKIP12755 728 aa24.81■■□□□ 1.56
SNTA1-201ENST00000217381 PDK1Q15118 436 aa24.81■■□□□ 1.56
SNTA1-201ENST00000217381 RASSF3Q86WH2 238 aa24.81■■□□□ 1.56
SNTA1-201ENST00000217381 PPFIBP2Q8ND30 876 aa24.81■■□□□ 1.56
SNTA1-201ENST00000217381 APPL2Q8NEU8 664 aa24.81■■□□□ 1.56
SNTA1-201ENST00000217381 NT5C3BQ969T7 300 aa24.81■■□□□ 1.56
SNTA1-201ENST00000217381 PGBD4Q96DM1 585 aa24.81■■□□□ 1.56
SNTA1-201ENST00000217381 PRDM12Q9H4Q4 367 aa24.81■■□□□ 1.56
SNTA1-201ENST00000217381 PCNTO95613 3336 aa24.81■■□□□ 1.56
SNTA1-201ENST00000217381 SMIM28A0A1B0GU29 152 aa24.81■■□□□ 1.56
SNTA1-201ENST00000217381 STRNO43815 780 aa24.81■■□□□ 1.56
SNTA1-201ENST00000217381 TUBP50607 506 aa24.81■■□□□ 1.56
SNTA1-201ENST00000217381 PDE1BQ01064 536 aa24.81■■□□□ 1.56
SNTA1-201ENST00000217381 SMAD1Q15797 465 aaKnown RBP24.81■■□□□ 1.56
SNTA1-201ENST00000217381 INSCQ1MX18 579 aa24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms