RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 KIAA0754O94854 1291 aa30.56■■■□□ 2.48
PABPN1-201ENST00000216727 OR4Q2P0C623 313 aa30.56■■■□□ 2.48
PABPN1-201ENST00000216727 MX2P20592 715 aa30.56■■■□□ 2.48
PABPN1-201ENST00000216727 PPIDQ08752 370 aaKnown RBP30.56■■■□□ 2.48
PABPN1-201ENST00000216727 GPNMBQ14956 572 aa30.56■■■□□ 2.48
PABPN1-201ENST00000216727 PLEKHG4Q58EX7 1191 aa30.56■■■□□ 2.48
PABPN1-201ENST00000216727 BRMS1LQ5PSV4 323 aa30.56■■■□□ 2.48
PABPN1-201ENST00000216727 NETO2Q8NC67 525 aa30.56■■■□□ 2.48
PABPN1-201ENST00000216727 ZNF296Q8WUU4 475 aaPredicted RBP30.56■■■□□ 2.48
PABPN1-201ENST00000216727 ALKBH8Q96BT7 664 aaKnown RBP30.56■■■□□ 2.48
PABPN1-201ENST00000216727 XRN2Q9H0D6 950 aaKnown RBP eCLIP30.56■■■□□ 2.482e-38■□□□□ 10.5
PABPN1-201ENST00000216727 SAMD15Q9P1V8 674 aa30.56■■■□□ 2.48
PABPN1-201ENST00000216727 IQANK1A0A1B0GTG1 560 aa30.56■■■□□ 2.48
PABPN1-201ENST00000216727 TADA2AO75478 443 aa30.56■■■□□ 2.48
PABPN1-201ENST00000216727 LRIG2O94898 1065 aa30.56■■■□□ 2.48
PABPN1-201ENST00000216727 KRT4P19013 534 aa30.56■■■□□ 2.48
PABPN1-201ENST00000216727 SERPINB6P35237 376 aa30.56■■■□□ 2.48
PABPN1-201ENST00000216727 BTBD8Q5XKL5 378 aa30.56■■■□□ 2.48
PABPN1-201ENST00000216727 TP53INP2Q8IXH6 220 aa30.56■■■□□ 2.48
PABPN1-201ENST00000216727 ZNF567Q8N184 647 aa30.56■■■□□ 2.48
PABPN1-201ENST00000216727 CCDC197Q8NCU1 140 aa30.56■■■□□ 2.48
PABPN1-201ENST00000216727 RNF34Q969K3 372 aa30.56■■■□□ 2.48
PABPN1-201ENST00000216727 SMOC2Q9H3U7 446 aa30.56■■■□□ 2.48
PABPN1-201ENST00000216727 APOEP02649 317 aa30.55■■■□□ 2.48
PABPN1-201ENST00000216727 INHBAP08476 426 aa30.55■■■□□ 2.48
PABPN1-201ENST00000216727 IFT88Q13099 833 aa30.55■■■□□ 2.48
PABPN1-201ENST00000216727 LRRC8BQ6P9F7 803 aa30.55■■■□□ 2.48
PABPN1-201ENST00000216727 NPWQ8N729 165 aa30.55■■■□□ 2.48
PABPN1-201ENST00000216727 MTSS1O43312 755 aa30.54■■■□□ 2.48
PABPN1-201ENST00000216727 EPHB2P29323 1055 aa30.54■■■□□ 2.48
PABPN1-201ENST00000216727 GBP2P32456 591 aaPredicted RBP30.54■■■□□ 2.48
PABPN1-201ENST00000216727 GALNT2Q10471 571 aa30.54■■■□□ 2.48
PABPN1-201ENST00000216727 UNC5AQ6ZN44 842 aa30.54■■■□□ 2.48
PABPN1-201ENST00000216727 SLC26A11Q86WA9 606 aa30.54■■■□□ 2.48
PABPN1-201ENST00000216727 DBF4BQ8NFT6 615 aa30.54■■■□□ 2.48
PABPN1-201ENST00000216727 HDAC11Q96DB2 347 aa30.54■■■□□ 2.48
PABPN1-201ENST00000216727 DNM1LO00429 736 aa30.54■■■□□ 2.48
PABPN1-201ENST00000216727 CA4P22748 312 aa30.54■■■□□ 2.48
PABPN1-201ENST00000216727 GRIA1P42261 906 aa30.54■■■□□ 2.48
PABPN1-201ENST00000216727 SPARCL1Q14515 664 aa30.54■■■□□ 2.48
PABPN1-201ENST00000216727 ITIH4Q14624 930 aa30.54■■■□□ 2.48
PABPN1-201ENST00000216727 VARS2Q5ST30 1063 aaKnown RBP30.54■■■□□ 2.48
PABPN1-201ENST00000216727 SCD5Q86SK9 330 aa30.54■■■□□ 2.48
PABPN1-201ENST00000216727 PRPF39Q86UA1 669 aaKnown RBP30.54■■■□□ 2.48
PABPN1-201ENST00000216727 LRRC6Q86X45 466 aa30.54■■■□□ 2.48
PABPN1-201ENST00000216727 ABI1Q8IZP0 508 aa30.54■■■□□ 2.48
PABPN1-201ENST00000216727 ANKS4BQ8N8V4 417 aa30.54■■■□□ 2.48
PABPN1-201ENST00000216727 C8orf48Q96LL4 319 aa30.54■■■□□ 2.48
PABPN1-201ENST00000216727 TGS1Q96RS0 853 aaKnown RBP30.54■■■□□ 2.48
PABPN1-201ENST00000216727 HAPLN3Q96S86 360 aa30.54■■■□□ 2.48
PABPN1-201ENST00000216727 TMEM51Q9NW97 253 aa30.54■■■□□ 2.48
PABPN1-201ENST00000216727 ABI2Q9NYB9 513 aaPredicted RBP30.54■■■□□ 2.48
PABPN1-201ENST00000216727 SEPT10Q9P0V9 454 aa30.54■■■□□ 2.48
PABPN1-201ENST00000216727 ZNF180Q9UJW8 692 aa30.54■■■□□ 2.48
PABPN1-201ENST00000216727 PCDHB7Q9Y5E2 793 aa30.54■■■□□ 2.48
PABPN1-201ENST00000216727 RPA3P35244 121 aaPredicted RBP30.53■■■□□ 2.48
PABPN1-201ENST00000216727 CYS1Q717R9 158 aa30.53■■■□□ 2.48
PABPN1-201ENST00000216727 PDCD7Q8N8D1 485 aaKnown RBP30.53■■■□□ 2.48
PABPN1-201ENST00000216727 GSDMBQ8TAX9 411 aa30.53■■■□□ 2.48
PABPN1-201ENST00000216727 ADAM28Q9UKQ2 775 aa30.53■■■□□ 2.48
PABPN1-201ENST00000216727 PITPNM1O00562 1244 aa30.52■■■□□ 2.48
PABPN1-201ENST00000216727 ZWINTO95229 277 aa30.52■■■□□ 2.48
PABPN1-201ENST00000216727 PTPN3P26045 913 aa30.52■■■□□ 2.48
PABPN1-201ENST00000216727 HTR7P34969 479 aa30.52■■■□□ 2.48
PABPN1-201ENST00000216727 VEGFBP49765 207 aa30.52■■■□□ 2.48
PABPN1-201ENST00000216727 SCN4BQ8IWT1 228 aa30.52■■■□□ 2.48
PABPN1-201ENST00000216727 SNX10Q9Y5X0 201 aa30.52■■■□□ 2.48
PABPN1-201ENST00000216727 GOLGA6L7A0A1B0GV03 622 aa30.52■■■□□ 2.48
PABPN1-201ENST00000216727 ANKRD65E5RJM6 399 aa30.52■■■□□ 2.48
PABPN1-201ENST00000216727 PSMB4P28070 264 aa30.52■■■□□ 2.48
PABPN1-201ENST00000216727 IFRD2Q12894 506 aaPredicted RBP30.52■■■□□ 2.48
PABPN1-201ENST00000216727 MRPL58Q14197 206 aaKnown RBP30.52■■■□□ 2.48
PABPN1-201ENST00000216727 NUGGCQ68CJ6 796 aa30.52■■■□□ 2.48
PABPN1-201ENST00000216727 MPP5Q8N3R9 675 aa30.52■■■□□ 2.48
PABPN1-201ENST00000216727 OTUD6BQ8N6M0 293 aa30.52■■■□□ 2.48
PABPN1-201ENST00000216727 ELAC2Q9BQ52 826 aaKnown RBP30.52■■■□□ 2.48
PABPN1-201ENST00000216727 FGFR1OP2Q9NVK5 253 aa30.52■■■□□ 2.48
PABPN1-201ENST00000216727 SCML2Q9UQR0 700 aa30.52■■■□□ 2.48
PABPN1-201ENST00000216727 PCDHA11Q9Y5I1 949 aa30.52■■■□□ 2.48
PABPN1-201ENST00000216727 MAD1L1Q9Y6D9 718 aa30.52■■■□□ 2.48
PABPN1-201ENST00000216727 MYO18AQ92614 2054 aaKnown RBP30.51■■■□□ 2.48
PABPN1-201ENST00000216727 TRIM66O15016 1216 aa30.51■■■□□ 2.47
PABPN1-201ENST00000216727 SNX3O60493 162 aa30.51■■■□□ 2.47
PABPN1-201ENST00000216727 MAGEA11P43364 429 aa30.51■■■□□ 2.47
PABPN1-201ENST00000216727 RGS9BPQ6ZS82 235 aa30.51■■■□□ 2.47
PABPN1-201ENST00000216727 PID1Q7Z2X4 250 aa30.51■■■□□ 2.47
PABPN1-201ENST00000216727 CASD1Q96PB1 797 aa30.51■■■□□ 2.47
PABPN1-201ENST00000216727 CEP41Q9BYV8 373 aa30.51■■■□□ 2.47
PABPN1-201ENST00000216727 KCNK1O00180 336 aa30.51■■■□□ 2.47
PABPN1-201ENST00000216727 FAM155BO75949 473 aa30.51■■■□□ 2.47
PABPN1-201ENST00000216727 TAC1P20366 129 aa30.51■■■□□ 2.47
PABPN1-201ENST00000216727 CCR1P32246 355 aa30.51■■■□□ 2.47
PABPN1-201ENST00000216727 GARSP41250 739 aaKnown RBP30.51■■■□□ 2.47
PABPN1-201ENST00000216727 PPP2R5DQ14738 602 aa30.51■■■□□ 2.47
PABPN1-201ENST00000216727 CCNJLQ8IV13 435 aa30.51■■■□□ 2.47
PABPN1-201ENST00000216727 NUP93Q8N1F7 819 aa30.51■■■□□ 2.47
PABPN1-201ENST00000216727 BANPQ8N9N5 519 aa30.51■■■□□ 2.47
PABPN1-201ENST00000216727 SEPT8Q92599 483 aa30.51■■■□□ 2.47
PABPN1-201ENST00000216727 APBB2Q92870 758 aa30.51■■■□□ 2.47
PABPN1-201ENST00000216727 KLHL8Q9P2G9 620 aaPredicted RBP30.51■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms