RNA–Protein interactions for RNA: ENST00000040877.1

TARBP1-201, Transcript of TAR (HIV-1) RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARBP1, Length 5,130 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARBP1-201ENST00000040877 FAM71AQ8IYT1 594 aa23.68■■□□□ 1.38
TARBP1-201ENST00000040877 VPS50Q96JG6 964 aa23.68■■□□□ 1.38
TARBP1-201ENST00000040877 CDT1Q9H211 546 aa23.68■■□□□ 1.38
TARBP1-201ENST00000040877 SF3B1O75533 1304 aaKnown RBP eCLIP23.68■■□□□ 1.38
TARBP1-201ENST00000040877 AP5Z1O43299 807 aa23.68■■□□□ 1.38
TARBP1-201ENST00000040877 KLRC4O43908 158 aa23.68■■□□□ 1.38
TARBP1-201ENST00000040877 TRIM13O60858 407 aa23.68■■□□□ 1.38
TARBP1-201ENST00000040877 OR56A5P0C7T3 313 aa23.68■■□□□ 1.38
TARBP1-201ENST00000040877 CHI3L1P36222 383 aaPredicted RBP23.68■■□□□ 1.38
TARBP1-201ENST00000040877 BCL2L1Q07817 233 aa23.68■■□□□ 1.38
TARBP1-201ENST00000040877 CDC16Q13042 620 aa23.68■■□□□ 1.38
TARBP1-201ENST00000040877 BMPR2Q13873 1038 aa23.68■■□□□ 1.38
TARBP1-201ENST00000040877 ZNF438Q7Z4V0 828 aa23.68■■□□□ 1.38
TARBP1-201ENST00000040877 ANKZF1Q9H8Y5 726 aa23.68■■□□□ 1.38
TARBP1-201ENST00000040877 RGS18Q9NS28 235 aa23.68■■□□□ 1.38
TARBP1-201ENST00000040877 USP17L7P0C7H9 530 aa23.68■■□□□ 1.38
TARBP1-201ENST00000040877 SCNN1GP51170 649 aa23.68■■□□□ 1.38
TARBP1-201ENST00000040877 ZNF143P52747 638 aaPredicted RBP23.68■■□□□ 1.38
TARBP1-201ENST00000040877 PLOD1Q02809 727 aaPredicted RBP23.68■■□□□ 1.38
TARBP1-201ENST00000040877 STK40Q8N2I9 435 aa23.68■■□□□ 1.38
TARBP1-201ENST00000040877 OSCP1Q8WVF1 389 aa23.68■■□□□ 1.38
TARBP1-201ENST00000040877 UBDO15205 165 aa23.67■■□□□ 1.38
TARBP1-201ENST00000040877 ERBB2P04626 1255 aa23.67■■□□□ 1.38
TARBP1-201ENST00000040877 CYP1A2P05177 515 aa23.67■■□□□ 1.38
TARBP1-201ENST00000040877 CAPSQ13938 189 aa23.67■■□□□ 1.38
TARBP1-201ENST00000040877 TMEM154Q6P9G4 183 aa23.67■■□□□ 1.38
TARBP1-201ENST00000040877 OTOAQ7RTW8 1153 aa23.67■■□□□ 1.38
TARBP1-201ENST00000040877 ETNPPLQ8TBG4 499 aa23.67■■□□□ 1.38
TARBP1-201ENST00000040877 ZFP42Q96MM3 310 aa23.67■■□□□ 1.38
TARBP1-201ENST00000040877 TMEM120AQ9BXJ8 343 aa23.67■■□□□ 1.38
TARBP1-201ENST00000040877 DNAJC18Q9H819 358 aa23.67■■□□□ 1.38
TARBP1-201ENST00000040877 IMPAD1Q9NX62 359 aa23.67■■□□□ 1.38
TARBP1-201ENST00000040877 SLIT3O75094 1523 aa23.67■■□□□ 1.38
TARBP1-201ENST00000040877 BTNL10A8MVZ5 291 aa23.67■■□□□ 1.38
TARBP1-201ENST00000040877 MGAT1P26572 445 aa23.67■■□□□ 1.38
TARBP1-201ENST00000040877 MMP13P45452 471 aa23.67■■□□□ 1.38
TARBP1-201ENST00000040877 PIK3CGP48736 1102 aa23.67■■□□□ 1.38
TARBP1-201ENST00000040877 CRYBB1P53674 252 aaPredicted RBP23.67■■□□□ 1.38
TARBP1-201ENST00000040877 MRPS35P82673 323 aaKnown RBP23.67■■□□□ 1.38
TARBP1-201ENST00000040877 CXCL17Q6UXB2 119 aa23.67■■□□□ 1.38
TARBP1-201ENST00000040877 ZCCHC9Q8N567 271 aaKnown RBP23.67■■□□□ 1.38
TARBP1-201ENST00000040877 JADE3Q92613 823 aa23.67■■□□□ 1.38
TARBP1-201ENST00000040877 ZNF558Q96NG5 402 aa23.67■■□□□ 1.38
TARBP1-201ENST00000040877 CD248Q9HCU0 757 aa23.67■■□□□ 1.38
TARBP1-201ENST00000040877 SMPD4Q9NXE4 827 aa23.67■■□□□ 1.38
TARBP1-201ENST00000040877 DNPEPQ9ULA0 475 aa23.67■■□□□ 1.38
TARBP1-201ENST00000040877 USP20Q9Y2K6 914 aa23.67■■□□□ 1.38
TARBP1-201ENST00000040877 TFE3P19532 575 aaPredicted RBP23.67■■□□□ 1.38
TARBP1-201ENST00000040877 RGMBQ6NW40 437 aa23.67■■□□□ 1.38
TARBP1-201ENST00000040877 CENPLQ8N0S6 344 aaPredicted RBP23.67■■□□□ 1.38
TARBP1-201ENST00000040877 BCL9LQ86UU0 1499 aa23.67■■□□□ 1.38
TARBP1-201ENST00000040877 GNG14A0A1W2PPG7 69 aa23.67■■□□□ 1.38
TARBP1-201ENST00000040877 RPN2P04844 631 aa23.67■■□□□ 1.38
TARBP1-201ENST00000040877 BGNP21810 368 aa23.67■■□□□ 1.38
TARBP1-201ENST00000040877 PBLDP30039 288 aaPredicted RBP23.67■■□□□ 1.38
TARBP1-201ENST00000040877 SGCGQ13326 291 aa23.67■■□□□ 1.38
TARBP1-201ENST00000040877 SCUBE1Q8IWY4 988 aa23.67■■□□□ 1.38
TARBP1-201ENST00000040877 KIAA0319LQ8IZA0 1049 aa23.67■■□□□ 1.38
TARBP1-201ENST00000040877 WDR27A2RRH5 827 aa23.66■■□□□ 1.38
TARBP1-201ENST00000040877 ARHGEF9O43307 516 aa23.66■■□□□ 1.38
TARBP1-201ENST00000040877 PCDH8O95206 1070 aa23.66■■□□□ 1.38
TARBP1-201ENST00000040877 MLH1P40692 756 aa23.66■■□□□ 1.38
TARBP1-201ENST00000040877 SKIV2L2P42285 1042 aaKnown RBP23.66■■□□□ 1.38
TARBP1-201ENST00000040877 MAPK8P45983 427 aa23.66■■□□□ 1.38
TARBP1-201ENST00000040877 SP3Q02447 781 aa23.66■■□□□ 1.38
TARBP1-201ENST00000040877 N4BP2L1Q5TBK1 243 aaPredicted RBP23.66■■□□□ 1.38
TARBP1-201ENST00000040877 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.66■■□□□ 1.38
TARBP1-201ENST00000040877 TMCC3Q9ULS5 477 aa23.66■■□□□ 1.38
TARBP1-201ENST00000040877 COL1A2P08123 1366 aa23.66■■□□□ 1.38
TARBP1-201ENST00000040877 FCGR1AP12314 374 aa23.66■■□□□ 1.38
TARBP1-201ENST00000040877 NEK2P51955 445 aa23.66■■□□□ 1.38
TARBP1-201ENST00000040877 RASA2Q15283 850 aa23.66■■□□□ 1.38
TARBP1-201ENST00000040877 SLC45A4Q5BKX6 768 aa23.66■■□□□ 1.38
TARBP1-201ENST00000040877 ARMC12Q5T9G4 340 aa23.66■■□□□ 1.38
TARBP1-201ENST00000040877 FBXO39Q8N4B4 442 aa23.66■■□□□ 1.38
TARBP1-201ENST00000040877 C2orf49Q9BVC5 232 aaPredicted RBP23.66■■□□□ 1.38
TARBP1-201ENST00000040877 MRPL17Q9NRX2 175 aaKnown RBP23.66■■□□□ 1.38
TARBP1-201ENST00000040877 ADRB2P07550 413 aa23.66■■□□□ 1.38
TARBP1-201ENST00000040877 NQO1P15559 274 aaKnown RBP23.66■■□□□ 1.38
TARBP1-201ENST00000040877 PSMA3P25788 255 aa23.66■■□□□ 1.38
TARBP1-201ENST00000040877 RRM2P31350 389 aa23.66■■□□□ 1.38
TARBP1-201ENST00000040877 CASP5P51878 434 aa23.66■■□□□ 1.38
TARBP1-201ENST00000040877 GLT6D1Q7Z4J2 308 aa23.66■■□□□ 1.38
TARBP1-201ENST00000040877 CYP4Z1Q86W10 505 aa23.66■■□□□ 1.38
TARBP1-201ENST00000040877 SHC3Q92529 594 aa23.66■■□□□ 1.38
TARBP1-201ENST00000040877 H3BMM5 538 aa23.66■■□□□ 1.38
TARBP1-201ENST00000040877 NOGQ13253 232 aa23.66■■□□□ 1.38
TARBP1-201ENST00000040877 WSCD1Q658N2 575 aa23.66■■□□□ 1.38
TARBP1-201ENST00000040877 ZNF470Q6ECI4 717 aa23.66■■□□□ 1.38
TARBP1-201ENST00000040877 LRRC52Q8N7C0 313 aa23.66■■□□□ 1.38
TARBP1-201ENST00000040877 MCOLN3Q8TDD5 553 aa23.66■■□□□ 1.38
TARBP1-201ENST00000040877 COPS5Q92905 334 aa23.66■■□□□ 1.38
TARBP1-201ENST00000040877 RAD18Q9NS91 495 aa23.66■■□□□ 1.38
TARBP1-201ENST00000040877 NINJ2Q9NZG7 142 aa23.66■■□□□ 1.38
TARBP1-201ENST00000040877 VPS51Q9UID3 782 aa23.66■■□□□ 1.38
TARBP1-201ENST00000040877 PTCH2Q9Y6C5 1203 aa23.66■■□□□ 1.38
TARBP1-201ENST00000040877 TSPAN3O60637 253 aa23.65■■□□□ 1.38
TARBP1-201ENST00000040877 USP1O94782 785 aa23.65■■□□□ 1.38
TARBP1-201ENST00000040877 SOX11P35716 441 aa23.65■■□□□ 1.38
TARBP1-201ENST00000040877 KRT78Q8N1N4 520 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms