RNA–Protein interactions for RNA: ENSMUST00000109543.8

Vcan-201, Transcript of Versican core protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcan, Length 2,321 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-201ENSMUST00000109543 Sf3b1Q99NB9 1304 aaKnown RBP15.98■□□□□ 0.15
Vcan-201ENSMUST00000109543 Gm45713A0A1B0GS68 446 aa15.98■□□□□ 0.15
Vcan-201ENSMUST00000109543 GnazO70443 355 aa15.98■□□□□ 0.15
Vcan-201ENSMUST00000109543 UmpsP13439 481 aaKnown RBP15.98■□□□□ 0.15
Vcan-201ENSMUST00000109543 Tsta3P23591 321 aa15.98■□□□□ 0.15
Vcan-201ENSMUST00000109543 Tbc1d10aP58802 500 aa15.98■□□□□ 0.15
Vcan-201ENSMUST00000109543 FerP70451 823 aa15.98■□□□□ 0.15
Vcan-201ENSMUST00000109543 Dact3Q0PHV7 610 aa15.98■□□□□ 0.15
Vcan-201ENSMUST00000109543 Fscn2Q32M02 492 aa15.98■□□□□ 0.15
Vcan-201ENSMUST00000109543 Sema3cQ62181 751 aa15.98■□□□□ 0.15
Vcan-201ENSMUST00000109543 Lrfn2Q80TG9 788 aa15.98■□□□□ 0.15
Vcan-201ENSMUST00000109543 Stx16Q8BVI5 326 aa15.98■□□□□ 0.15
Vcan-201ENSMUST00000109543 Amer2Q8CCJ4 672 aa15.98■□□□□ 0.15
Vcan-201ENSMUST00000109543 Agbl2Q8CDK2 862 aa15.98■□□□□ 0.15
Vcan-201ENSMUST00000109543 Ccdc63Q8CDV6 558 aa15.98■□□□□ 0.15
Vcan-201ENSMUST00000109543 Abhd8Q8R0P8 439 aa15.98■□□□□ 0.15
Vcan-201ENSMUST00000109543 Nudcd3Q8R1N4 363 aa15.98■□□□□ 0.15
Vcan-201ENSMUST00000109543 Spon1Q8VCC9 807 aa15.98■□□□□ 0.15
Vcan-201ENSMUST00000109543 Pofut2Q8VHI3 429 aa15.98■□□□□ 0.15
Vcan-201ENSMUST00000109543 Zcchc14Q8VIG0 956 aa15.98■□□□□ 0.15
Vcan-201ENSMUST00000109543 Tceal1Q921P9 165 aa15.98■□□□□ 0.15
Vcan-201ENSMUST00000109543 PigxQ99LV7 254 aa15.98■□□□□ 0.15
Vcan-201ENSMUST00000109543 Noxred1Q9D3S5 366 aa15.98■□□□□ 0.15
Vcan-201ENSMUST00000109543 Dtwd1Q9D8U7 304 aa15.98■□□□□ 0.15
Vcan-201ENSMUST00000109543 Tsga13Q9DA17 273 aa15.98■□□□□ 0.15
Vcan-201ENSMUST00000109543 Pgam1Q9DBJ1 254 aa15.98■□□□□ 0.15
Vcan-201ENSMUST00000109543 Plagl1Q9JLQ4 704 aa15.98■□□□□ 0.15
Vcan-201ENSMUST00000109543 Capn7Q9R1S8 813 aa15.98■□□□□ 0.15
Vcan-201ENSMUST00000109543 GghQ9Z0L8 317 aa15.98■□□□□ 0.15
Vcan-201ENSMUST00000109543 Mtm1Q9Z2C5 603 aa15.98■□□□□ 0.15
Vcan-201ENSMUST00000109543 Col24a1Q30D77 1733 aa15.98■□□□□ 0.15
Vcan-201ENSMUST00000109543 Gm36028A0A0U1RPM1 299 aa15.97■□□□□ 0.15
Vcan-201ENSMUST00000109543 Zmynd8A2A484 1235 aaKnown RBP15.97■□□□□ 0.15
Vcan-201ENSMUST00000109543 Kpna7C0LLJ0 499 aa15.97■□□□□ 0.15
Vcan-201ENSMUST00000109543 Gm5160F8VPN3 147 aa15.97■□□□□ 0.15
Vcan-201ENSMUST00000109543 Acot8P58137 320 aa15.97■□□□□ 0.15
Vcan-201ENSMUST00000109543 Gpr15Q0VDU3 360 aa15.97■□□□□ 0.15
Vcan-201ENSMUST00000109543 E330034G19RikQ3UWX6 351 aa15.97■□□□□ 0.15
Vcan-201ENSMUST00000109543 Grm6Q5NCH9 871 aa15.97■□□□□ 0.15
Vcan-201ENSMUST00000109543 ChukQ60680 745 aa15.97■□□□□ 0.15
Vcan-201ENSMUST00000109543 Phc1Q64028 1012 aa15.97■□□□□ 0.15
Vcan-201ENSMUST00000109543 Nlgn2Q69ZK9 836 aa15.97■□□□□ 0.15
Vcan-201ENSMUST00000109543 Acap2Q6ZQK5 770 aa15.97■□□□□ 0.15
Vcan-201ENSMUST00000109543 Tas2r109Q7M707 316 aa15.97■□□□□ 0.15
Vcan-201ENSMUST00000109543 Clec2eQ80XD9 204 aa15.97■□□□□ 0.15
Vcan-201ENSMUST00000109543 Gtf3c4Q8BMQ2 817 aaKnown RBP15.97■□□□□ 0.15
Vcan-201ENSMUST00000109543 Ago3Q8CJF9 860 aa15.97■□□□□ 0.15
Vcan-201ENSMUST00000109543 Pacs1Q8K212 961 aa15.97■□□□□ 0.15
Vcan-201ENSMUST00000109543 Prrg2Q8R182 198 aa15.97■□□□□ 0.15
Vcan-201ENSMUST00000109543 Tbrg4Q91YM4 630 aaKnown RBP15.97■□□□□ 0.15
Vcan-201ENSMUST00000109543 Rsrc1Q9DBU6 334 aa15.97■□□□□ 0.15
Vcan-201ENSMUST00000109543 Wfdc1Q9ESH5 211 aa15.97■□□□□ 0.15
Vcan-201ENSMUST00000109543 Gm5485A0A1D5RM98 91 aa15.97■□□□□ 0.15
Vcan-201ENSMUST00000109543 Rnf19bA2A7Q9 732 aa15.97■□□□□ 0.15
Vcan-201ENSMUST00000109543 Serpinb3cA2RSF9 386 aa15.97■□□□□ 0.15
Vcan-201ENSMUST00000109543 Gm6133B2RY53 190 aa15.97■□□□□ 0.15
Vcan-201ENSMUST00000109543 Gm10717D3Z1I8 228 aa15.97■□□□□ 0.15
Vcan-201ENSMUST00000109543 Ifi206G3UZV2 921 aa15.97■□□□□ 0.15
Vcan-201ENSMUST00000109543 Axin1O35625 863 aa15.97■□□□□ 0.15
Vcan-201ENSMUST00000109543 Tubgcp3P58854 905 aa15.97■□□□□ 0.15
Vcan-201ENSMUST00000109543 Itga11P61622 1188 aa15.97■□□□□ 0.15
Vcan-201ENSMUST00000109543 Serpina5P70458 405 aa15.97■□□□□ 0.15
Vcan-201ENSMUST00000109543 MylpfP97457 169 aa15.97■□□□□ 0.15
Vcan-201ENSMUST00000109543 Smpd1Q04519 627 aa15.97■□□□□ 0.15
Vcan-201ENSMUST00000109543 Gsdmc2Q2KHK6 480 aa15.97■□□□□ 0.15
Vcan-201ENSMUST00000109543 Gsdmc4Q3TR54 480 aa15.97■□□□□ 0.15
Vcan-201ENSMUST00000109543 Otol1Q4ZJM7 482 aa15.97■□□□□ 0.15
Vcan-201ENSMUST00000109543 Foxd4Q60688 444 aa15.97■□□□□ 0.15
Vcan-201ENSMUST00000109543 Olfr8Q60892 310 aa15.97■□□□□ 0.15
Vcan-201ENSMUST00000109543 Htr1aQ64264 421 aa15.97■□□□□ 0.15
Vcan-201ENSMUST00000109543 WlsQ6DID7 541 aa15.97■□□□□ 0.15
Vcan-201ENSMUST00000109543 Dnajb13Q80Y75 316 aa15.97■□□□□ 0.15
Vcan-201ENSMUST00000109543 Ppp1r12bQ8BG95 976 aa15.97■□□□□ 0.15
Vcan-201ENSMUST00000109543 Slc7a4Q8BLQ7 635 aa15.97■□□□□ 0.15
Vcan-201ENSMUST00000109543 Gsdmc3Q8CB12 480 aa15.97■□□□□ 0.15
Vcan-201ENSMUST00000109543 Olfr532Q8VGT4 309 aa15.97■□□□□ 0.15
Vcan-201ENSMUST00000109543 Arl8bQ9CQW2 186 aa15.97■□□□□ 0.15
Vcan-201ENSMUST00000109543 Tex9Q9D845 387 aa15.97■□□□□ 0.15
Vcan-201ENSMUST00000109543 Usp34Q6ZQ93 3582 aa15.97■□□□□ 0.15
Vcan-201ENSMUST00000109543 Igkv10-96A0A140T8M1 115 aa15.96■□□□□ 0.15
Vcan-201ENSMUST00000109543 Ccdc8D3YZV8 685 aa15.96■□□□□ 0.15
Vcan-201ENSMUST00000109543 Klf1P46099 358 aa15.96■□□□□ 0.15
Vcan-201ENSMUST00000109543 Hrh2P97292 397 aa15.96■□□□□ 0.15
Vcan-201ENSMUST00000109543 Cntnap5bQ0V8T8 1292 aa15.96■□□□□ 0.15
Vcan-201ENSMUST00000109543 Smarcd1Q61466 515 aaKnown RBP15.96■□□□□ 0.15
Vcan-201ENSMUST00000109543 Grid2Q61625 1007 aa15.96■□□□□ 0.15
Vcan-201ENSMUST00000109543 Capn3Q64691 821 aa15.96■□□□□ 0.15
Vcan-201ENSMUST00000109543 Ccnt2Q7TQK0 723 aa15.96■□□□□ 0.15
Vcan-201ENSMUST00000109543 Rassf6Q80UQ2 353 aa15.96■□□□□ 0.15
Vcan-201ENSMUST00000109543 Tmem220Q8BP07 167 aa15.96■□□□□ 0.15
Vcan-201ENSMUST00000109543 Tmem209Q8BRG8 561 aaKnown RBP15.96■□□□□ 0.15
Vcan-201ENSMUST00000109543 Atg16l1Q8C0J2 607 aa15.96■□□□□ 0.15
Vcan-201ENSMUST00000109543 Prr33Q8C494 260 aa15.96■□□□□ 0.15
Vcan-201ENSMUST00000109543 Scara3Q8C850 606 aa15.96■□□□□ 0.15
Vcan-201ENSMUST00000109543 Dedd2Q8QZV0 330 aa15.96■□□□□ 0.15
Vcan-201ENSMUST00000109543 Dnajc9Q91WN1 259 aaKnown RBP15.96■□□□□ 0.15
Vcan-201ENSMUST00000109543 Gins2Q9D600 185 aa15.96■□□□□ 0.15
Vcan-201ENSMUST00000109543 Ropn1Q9ESG2 212 aa15.96■□□□□ 0.15
Vcan-201ENSMUST00000109543 MycsQ9Z304 431 aa15.96■□□□□ 0.15
Vcan-201ENSMUST00000109543 Gm3252E9PUT9 216 aa15.96■□□□□ 0.15
Retrieved 100 of 22,080 RNA–protein pairs in 30.5 ms