RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 4933409G03RikQ8C5U0 320 aa9.35□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Nek9Q8K1R7 984 aa9.35□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Stn1Q8K2X3 378 aa9.35□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Cables2Q8K3M5 476 aa9.35□□□□□ -0.91
Upf3b-201ENSMUST00000076265 RabepkQ8VCH5 380 aa9.35□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Olfr693Q8VF89 316 aa9.35□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Olfr1459Q8VFV9 307 aa9.35□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Pomgnt1Q91X88 660 aa9.35□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Wbp11Q923D5 641 aaKnown RBP9.35□□□□□ -0.91
Upf3b-201ENSMUST00000076265 4930503E14RikQ9D583 177 aa9.35□□□□□ -0.91
Upf3b-201ENSMUST00000076265 RetnlaQ9EP95 111 aa9.35□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Ube4bQ9ES00 1173 aa9.35□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Pde7bQ9QXQ1 446 aa9.35□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Shank3Q4ACU6 1730 aa9.35□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Abca3Q8R420 1704 aa9.35□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Gm13089A2AGW7 455 aa9.34□□□□□ -0.91
Upf3b-201ENSMUST00000076265 L3mbtl4B1B1A0 621 aa9.34□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Fbrsl1E9Q9T0 1031 aa9.34□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Gm8247F6VRJ8 213 aa9.34□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Gtpbp1O08582 668 aaKnown RBP9.34□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Ube3aO08759 870 aa9.34□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Pip4k2aO70172 405 aa9.34□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Igf2bp1O88477 577 aaKnown RBP9.34□□□□□ -0.91
Upf3b-201ENSMUST00000076265 PrkacaP05132 351 aaKnown RBP9.34□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Ftl1P29391 183 aa9.34□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Hmgb2P30681 210 aaKnown RBP9.34□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Nr2f2P43135 414 aa9.34□□□□□ -0.91
Upf3b-201ENSMUST00000076265 EvcP57680 1005 aa9.34□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Prrx1P63013 245 aa9.34□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Tuba4aP68368 448 aa9.34□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Znf746Q3U133 652 aa9.34□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Aak1Q3UHJ0 959 aa9.34□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Ccdc185Q3V118 621 aa9.34□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Panx2Q6IMP4 677 aa9.34□□□□□ -0.91
Upf3b-201ENSMUST00000076265 FukQ7TMC8 1090 aa9.34□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Olfr1101Q7TR59 310 aa9.34□□□□□ -0.91
Upf3b-201ENSMUST00000076265 RragaQ80X95 313 aa9.34□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Fbxo46Q8BG80 603 aa9.34□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Znf786Q8BV42 777 aa9.34□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Kctd12bQ8C7J6 292 aa9.34□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Gramd4Q8CB44 633 aa9.34□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Syn3Q8JZP2 579 aa9.34□□□□□ -0.91
Upf3b-201ENSMUST00000076265 OtoaQ8K561 1137 aa9.34□□□□□ -0.91
Upf3b-201ENSMUST00000076265 NeproQ8R2U2 564 aa9.34□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Lipt1Q8VCM4 373 aa9.34□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Tspyl4Q8VD63 406 aa9.34□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Rprd1aQ8VDS4 312 aa9.34□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Ndfip2Q91ZP6 311 aa9.34□□□□□ -0.91
Upf3b-201ENSMUST00000076265 MmadhcQ99LS1 296 aa9.34□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Chd1lQ9CXF7 900 aa9.34□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Ppil1Q9D0W5 166 aa9.34□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Arfgap3Q9D8S3 523 aa9.34□□□□□ -0.91
Upf3b-201ENSMUST00000076265 B3galt5Q9JI67 308 aa9.34□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Cabp5Q9JLK3 173 aa9.34□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Smarcb1Q9Z0H3 385 aa9.34□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Vmn2r25W4VSP2 855 aa9.34□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Vmn2r94E9PZK8 818 aa9.34□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Nrg3O35181 713 aa9.34□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Ier5O89113 308 aa9.34□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Jmjd7P0C872 316 aa9.34□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Eef1a1P10126 462 aaKnown RBP9.34□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Mdh1P14152 334 aa9.34□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Bmpr1aP36895 532 aa9.34□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Eef1a2P62631 463 aaKnown RBP9.34□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Fmo5P97872 533 aa9.34□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Psg29Q3URN6 468 aa9.34□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Chsy3Q5DTK1 884 aa9.34□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Adam12Q61824 903 aa9.34□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Sel1l3Q80TS8 1137 aa9.34□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Prkag3Q8BGM7 489 aa9.34□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Trpa1Q8BLA8 1125 aa9.34□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Mei4Q8BRM6 389 aa9.34□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Kbtbd13Q8C828 458 aa9.34□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Mamdc2Q8CG85 686 aa9.34□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Tph2Q8CGV2 488 aa9.34□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Ffar2Q8VCK6 330 aa9.34□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Olfr1276Q8VF40 312 aa9.34□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Olfr30Q8VGD8 315 aa9.34□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Pcdha3Q91Y16 942 aa9.34□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Atad3Q925I1 591 aa9.34□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Tnip2Q99JG7 430 aa9.34□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Olfr711Q9EPG2 314 aa9.34□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Tlr2Q9QUN7 784 aa9.34□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Morf4l2Q9R0Q4 288 aa9.34□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Bmp10Q9R229 421 aa9.34□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Crb1Q8VHS2 1405 aa9.34□□□□□ -0.91
Upf3b-201ENSMUST00000076265 Myo3bQ1EG27 1305 aa9.33□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Arrdc4A0A0B4J1F4 415 aa9.33□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Vwa5b1A9Z1V5 1215 aa9.33□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Arhgap42B2RQE8 841 aa9.33□□□□□ -0.92
Upf3b-201ENSMUST00000076265 1700029H14RikE9PY36 240 aa9.33□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Tex16F6WNY1 1150 aa9.33□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Limk2O54785 638 aa9.33□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Suv39h1O54864 412 aa9.33□□□□□ -0.92
Upf3b-201ENSMUST00000076265 GzmdP11033 252 aa9.33□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Pik3r1P26450 724 aa9.33□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Rad23bP54728 416 aa9.33□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Tlr7P58681 1050 aa9.33□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Grm1P97772 1199 aa9.33□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Tcp11Q01755 566 aa9.33□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 24.5 ms