RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Aldh4a1Q8CHT0 562 aa12.19□□□□□ -0.46
Trim56-201ENSMUST00000054384 Pop1Q8K205 1045 aa12.19□□□□□ -0.46
Trim56-201ENSMUST00000054384 Lgi2Q8K4Z0 550 aa12.19□□□□□ -0.46
Trim56-201ENSMUST00000054384 Msh5Q9QUM7 833 aa12.19□□□□□ -0.46
Trim56-201ENSMUST00000054384 Igsf9bE9PZ19 1328 aa12.18□□□□□ -0.46
Trim56-201ENSMUST00000054384 Pcdh9F8VPK8 1237 aa12.18□□□□□ -0.46
Trim56-201ENSMUST00000054384 Aldh3a1P47739 453 aa12.18□□□□□ -0.46
Trim56-201ENSMUST00000054384 Q8BH50 245 aa12.18□□□□□ -0.46
Trim56-201ENSMUST00000054384 Lpcat2Q8BYI6 544 aa12.18□□□□□ -0.46
Trim56-201ENSMUST00000054384 Hkdc1Q91W97 915 aa12.18□□□□□ -0.46
Trim56-201ENSMUST00000054384 Arhgef25Q9CWR0 618 aa12.18□□□□□ -0.46
Trim56-201ENSMUST00000054384 Cmtm6Q9CZ69 183 aa12.18□□□□□ -0.46
Trim56-201ENSMUST00000054384 Fam227aQ9D3V8 625 aa12.18□□□□□ -0.46
Trim56-201ENSMUST00000054384 Oma1Q9D8H7 521 aa12.18□□□□□ -0.46
Trim56-201ENSMUST00000054384 Bscl2Q9Z2E9 383 aa12.18□□□□□ -0.46
Trim56-201ENSMUST00000054384 Olfr611K7N609 323 aa12.18□□□□□ -0.46
Trim56-201ENSMUST00000054384 Olfr612L7N462 323 aa12.18□□□□□ -0.46
Trim56-201ENSMUST00000054384 Fgfr2P21803 821 aa12.18□□□□□ -0.46
Trim56-201ENSMUST00000054384 Olfr670Q7TRP3 312 aa12.18□□□□□ -0.46
Trim56-201ENSMUST00000054384 Ddhd1Q80YA3 547 aa12.18□□□□□ -0.46
Trim56-201ENSMUST00000054384 NapepldQ8BH82 396 aa12.18□□□□□ -0.46
Trim56-201ENSMUST00000054384 Drd5Q8BLD9 478 aa12.18□□□□□ -0.46
Trim56-201ENSMUST00000054384 Slc9a7Q8BLV3 726 aa12.18□□□□□ -0.46
Trim56-201ENSMUST00000054384 Tbc1d10cQ8C9V1 444 aa12.18□□□□□ -0.46
Trim56-201ENSMUST00000054384 Unc5bQ8K1S3 945 aa12.18□□□□□ -0.46
Trim56-201ENSMUST00000054384 Pou5f2Q9DAC9 329 aa12.18□□□□□ -0.46
Trim56-201ENSMUST00000054384 RhoaQ9QUI0 193 aa12.18□□□□□ -0.46
Trim56-201ENSMUST00000054384 Mbd5B1AYB6 1498 aa12.18□□□□□ -0.46
Trim56-201ENSMUST00000054384 Mroh2aD3Z750 1679 aa12.18□□□□□ -0.46
Trim56-201ENSMUST00000054384 Pik3r2O08908 722 aa12.18□□□□□ -0.46
Trim56-201ENSMUST00000054384 PcnaP17918 261 aa12.18□□□□□ -0.46
Trim56-201ENSMUST00000054384 Glis3Q6XP49 780 aa12.18□□□□□ -0.46
Trim56-201ENSMUST00000054384 Fbxo30Q8BJL1 746 aa12.18□□□□□ -0.46
Trim56-201ENSMUST00000054384 Nlrp4bQ8C6J9 863 aa12.18□□□□□ -0.46
Trim56-201ENSMUST00000054384 Ndufv1Q91YT0 464 aa12.18□□□□□ -0.46
Trim56-201ENSMUST00000054384 Depdc5P61460 1591 aa12.18□□□□□ -0.46
Trim56-201ENSMUST00000054384 Irf8P23611 424 aa12.18□□□□□ -0.46
Trim56-201ENSMUST00000054384 Mks1Q5SW45 561 aa12.18□□□□□ -0.46
Trim56-201ENSMUST00000054384 Dsg1bQ7TSF1 1060 aa12.18□□□□□ -0.46
Trim56-201ENSMUST00000054384 Tmem169Q8BG50 297 aa12.18□□□□□ -0.46
Trim56-201ENSMUST00000054384 Oscp1Q8BHW2 379 aa12.18□□□□□ -0.46
Trim56-201ENSMUST00000054384 Mta1Q8K4B0 715 aaKnown RBP12.18□□□□□ -0.46
Trim56-201ENSMUST00000054384 Atxn7Q8R4I1 867 aa12.18□□□□□ -0.46
Trim56-201ENSMUST00000054384 Olfr1122Q8VGT9 326 aa12.18□□□□□ -0.46
Trim56-201ENSMUST00000054384 Skp1Q9WTX5 163 aa12.18□□□□□ -0.46
Trim56-201ENSMUST00000054384 Cldn3Q9Z0G9 219 aa12.18□□□□□ -0.46
Trim56-201ENSMUST00000054384 Cdr2lA2A6T1 465 aa12.18□□□□□ -0.46
Trim56-201ENSMUST00000054384 NfiaQ02780 532 aa12.18□□□□□ -0.46
Trim56-201ENSMUST00000054384 Bcar1Q61140 874 aa12.18□□□□□ -0.46
Trim56-201ENSMUST00000054384 Mbtd1Q6P5G3 631 aa12.18□□□□□ -0.46
Trim56-201ENSMUST00000054384 Ttc24Q8BYG0 334 aa12.18□□□□□ -0.46
Trim56-201ENSMUST00000054384 Ldlrap1Q8C142 308 aa12.18□□□□□ -0.46
Trim56-201ENSMUST00000054384 Cep72Q9D3R3 646 aa12.18□□□□□ -0.46
Trim56-201ENSMUST00000054384 Rabl3Q9D4V7 236 aa12.18□□□□□ -0.46
Trim56-201ENSMUST00000054384 Prkar1aQ9DBC7 381 aa12.18□□□□□ -0.46
Trim56-201ENSMUST00000054384 Smad9Q9JIW5 430 aa12.18□□□□□ -0.46
Trim56-201ENSMUST00000054384 XdhQ00519 1335 aa12.18□□□□□ -0.46
Trim56-201ENSMUST00000054384 Ptch2O35595 1182 aa12.18□□□□□ -0.46
Trim56-201ENSMUST00000054384 Ndufs6P52503 116 aa12.18□□□□□ -0.46
Trim56-201ENSMUST00000054384 Slc13a3Q91Y63 600 aa12.18□□□□□ -0.46
Trim56-201ENSMUST00000054384 Sult2a7A0A1B0GRF0 313 aa12.18□□□□□ -0.46
Trim56-201ENSMUST00000054384 LtfP08071 707 aa12.18□□□□□ -0.46
Trim56-201ENSMUST00000054384 Reep1Q8BGH4 201 aa12.18□□□□□ -0.46
Trim56-201ENSMUST00000054384 Nr3c2Q8VII8 978 aa12.18□□□□□ -0.46
Trim56-201ENSMUST00000054384 Myl9Q9CQ19 172 aa12.18□□□□□ -0.46
Trim56-201ENSMUST00000054384 Vwa5b1A9Z1V5 1215 aa12.17□□□□□ -0.46
Trim56-201ENSMUST00000054384 MndalD0QMC3 538 aaKnown RBP12.17□□□□□ -0.46
Trim56-201ENSMUST00000054384 Celf5D3Z4T1 395 aaKnown RBP12.17□□□□□ -0.46
Trim56-201ENSMUST00000054384 RhocQ62159 193 aa12.17□□□□□ -0.46
Trim56-201ENSMUST00000054384 Teddm1bQ8CC62 306 aa12.17□□□□□ -0.46
Trim56-201ENSMUST00000054384 Tube1Q9D6T1 475 aa12.17□□□□□ -0.46
Trim56-201ENSMUST00000054384 Cyp2c55Q9D816 490 aa12.17□□□□□ -0.46
Trim56-201ENSMUST00000054384 Stk4Q9JI11 487 aa12.17□□□□□ -0.46
Trim56-201ENSMUST00000054384 Sars2Q9JJL8 518 aa12.17□□□□□ -0.46
Trim56-201ENSMUST00000054384 PfkpQ9WUA3 784 aaKnown RBP12.17□□□□□ -0.46
Trim56-201ENSMUST00000054384 Gm6460F6YJZ8 199 aa12.17□□□□□ -0.46
Trim56-201ENSMUST00000054384 PtenO08586 403 aa12.17□□□□□ -0.46
Trim56-201ENSMUST00000054384 H2-M9O19442 342 aa12.17□□□□□ -0.46
Trim56-201ENSMUST00000054384 Srp54P14576 504 aa12.17□□□□□ -0.46
Trim56-201ENSMUST00000054384 TdgP56581 421 aa12.17□□□□□ -0.46
Trim56-201ENSMUST00000054384 B3gat3P58158 335 aa12.17□□□□□ -0.46
Trim56-201ENSMUST00000054384 Aldh16a1Q571I9 802 aa12.17□□□□□ -0.46
Trim56-201ENSMUST00000054384 Nudcd1Q6PIP5 582 aa12.17□□□□□ -0.46
Trim56-201ENSMUST00000054384 Acsm2Q8K0L3 575 aa12.17□□□□□ -0.46
Trim56-201ENSMUST00000054384 Cyp2t4E9PWV0 503 aa12.17□□□□□ -0.46
Trim56-201ENSMUST00000054384 Men1O88559 611 aaKnown RBP12.17□□□□□ -0.46
Trim56-201ENSMUST00000054384 Hsd17b1P51656 344 aa12.17□□□□□ -0.46
Trim56-201ENSMUST00000054384 Ap5z1Q3U829 807 aa12.17□□□□□ -0.46
Trim56-201ENSMUST00000054384 Fbxw10Q5SUS0 1030 aa12.17□□□□□ -0.46
Trim56-201ENSMUST00000054384 Raver2Q7TPD6 673 aa12.17□□□□□ -0.46
Trim56-201ENSMUST00000054384 Arhgef3Q91X46 524 aa12.17□□□□□ -0.46
Trim56-201ENSMUST00000054384 Ptdss1Q99LH2 473 aaKnown RBP12.17□□□□□ -0.46
Trim56-201ENSMUST00000054384 Gm10477F6SW83 55 aa12.17□□□□□ -0.46
Trim56-201ENSMUST00000054384 Gas2P11862 314 aaKnown RBP12.17□□□□□ -0.46
Trim56-201ENSMUST00000054384 Nt5dc3Q3UHB1 546 aa12.17□□□□□ -0.46
Trim56-201ENSMUST00000054384 Zfp560Q3URI6 754 aa12.17□□□□□ -0.46
Trim56-201ENSMUST00000054384 Bhlhe22Q8C6A8 355 aa12.17□□□□□ -0.46
Trim56-201ENSMUST00000054384 Rilpl2Q99LE1 197 aa12.17□□□□□ -0.46
Trim56-201ENSMUST00000054384 Gtf2h1Q9DBA9 547 aa12.17□□□□□ -0.46
Trim56-201ENSMUST00000054384 PlekQ9JHK5 350 aaKnown RBP12.17□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 31 ms