RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Dnajc3Q91YW3 504 aa7.11□□□□□ -1.27
Bdnf-201ENSMUST00000053317 MrgpreQ91ZB7 310 aa7.11□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Rnf112Q96DY5 654 aa7.11□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Vps28Q9D1C8 221 aa7.11□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Klhl40Q9D783 621 aa7.11□□□□□ -1.27
Bdnf-201ENSMUST00000053317 MefvQ9JJ26 767 aa7.11□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Insl5Q9WUG6 135 aa7.11□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Snx1Q9WV80 522 aa7.11□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Tmem215A7E1Z1 235 aa7.11□□□□□ -1.27
Bdnf-201ENSMUST00000053317 A630010A05RikA9C473 232 aa7.11□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Ttc17E9PVB5 1198 aa7.11□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Gm5160F8VPN3 147 aa7.11□□□□□ -1.27
Bdnf-201ENSMUST00000053317 HpdP49429 393 aa7.11□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Cntn3Q07409 1028 aa7.11□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Rnf113a2Q14B01 337 aa7.11□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Taar7eQ5QD09 358 aa7.11□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Map3k10Q66L42 940 aa7.11□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Rasa4Q6PFQ7 802 aa7.11□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Tdpoz4Q6YCH2 370 aa7.11□□□□□ -1.27
Bdnf-201ENSMUST00000053317 RbakQ8BQC8 711 aa7.11□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Lmo3Q8BZL8 145 aa7.11□□□□□ -1.27
Bdnf-201ENSMUST00000053317 CntrobQ8CB62 887 aa7.11□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Usp27Q8CEG8 438 aa7.11□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Vopp1Q8R1C3 172 aa7.11□□□□□ -1.27
Bdnf-201ENSMUST00000053317 1700109H08RikQ9D9C0 210 aa7.11□□□□□ -1.27
Bdnf-201ENSMUST00000053317 PnkpQ9JLV6 522 aaKnown RBP7.11□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Spata31d1aE9QA35 1336 aa7.11□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Gm14781A2A9Q9 366 aa7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Znf804aA2AKY4 1200 aa7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Acp4D3YTS9 425 aa7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 4930444G20RikD3Z741 495 aa7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Serpinb9O08797 374 aa7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Per2O54943 1257 aa7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Rb1P13405 921 aa7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 TktP40142 623 aaKnown RBP7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Cdc25cP48967 447 aa7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Rps24P62849 133 aaKnown RBP7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Smpdl3aP70158 445 aa7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Mageb5Q14AN0 366 aa7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Zfp791Q497V9 528 aa7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Fbxw11Q5SRY7 542 aaKnown RBP7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Nrde2Q80XC6 1172 aa7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Znf598Q80YR4 908 aaKnown RBP7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Slc6a17Q8BJI1 727 aa7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Sytl1Q99N80 567 aa7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Pard3bQ9CSB4 1203 aa7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Acbd6Q9D061 282 aa7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Coro7Q9D2V7 922 aa7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Jph3Q9ET77 744 aa7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Arl10Q9QXJ4 243 aa7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 TfebQ9R210 475 aa7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Smarcb1Q9Z0H3 385 aa7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Ighv11-1A0A075B5R6 117 aa7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Slc35g2D3YVE8 412 aa7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Olfr414E9Q5P8 317 aa7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Slc1a2P43006 572 aa7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Smad1P70340 465 aa7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Irf7P70434 457 aa7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 HdxQ14B70 692 aa7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Tmem237Q3V0J1 427 aa7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Fra10ac1Q8BP78 315 aa7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Slc9a4Q8BUE1 797 aa7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Lancl3Q8CD19 420 aa7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Stau2Q8CJ67 570 aaKnown RBP7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Wnt9aQ8R5M2 365 aa7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Mlc1Q8VHK5 382 aa7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Chn1Q91V57 459 aa7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Spns2Q91VM4 549 aa7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Stk4Q9JI11 487 aa7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Gtf2ird1Q9JI57 1104 aaKnown RBP7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Cul3Q9JLV5 768 aa7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Fam81bA0A140LI28 432 aa7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Gm3336J3QMQ6 198 aa7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Nr1i3O35627 358 aa7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Atp2a2O55143 1044 aaKnown RBP7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 TecP24604 630 aa7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Hnrnph2P70333 449 aaKnown RBP7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 4930502E18RikQ14BQ3 236 aa7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 LbrQ3U9G9 626 aaKnown RBP7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Ttc9Q3V038 219 aa7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Slc6a4Q60857 630 aa7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Kcnk12Q76M80 430 aa7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Trim17Q7TPM3 477 aa7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Chmp2bQ8BJF9 213 aa7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Ttc16Q8C1F5 767 aa7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Uba6Q8C7R4 1053 aa7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Zmiz2Q8CIE2 920 aa7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Fam129bQ8R1F1 749 aa7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Slc35f5Q8R314 524 aa7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Barhl2Q8VIB5 384 aa7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Lsm7Q9CQQ8 103 aaKnown RBP7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Hddc3Q9D114 179 aa7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Gtf2h1Q9DBA9 547 aa7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 GabrqQ9JLF1 638 aa7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Atp11cQ9QZW0 1129 aa7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 PrebQ9WUQ2 417 aa7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Olfr663A0A1B0GSI9 319 aa7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Ap3d1O54774 1199 aa7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Cd19P25918 547 aa7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 TubP50586 505 aa7.1□□□□□ -1.27
Retrieved 100 of 22,080 RNA–protein pairs in 54.9 ms