RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Acvrl1Q61288 502 aa12.16□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Brd8Q8R3B7 951 aa12.16□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Unc45aQ99KD5 944 aa12.16□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Cndp2Q9D1A2 475 aaKnown RBP12.16□□□□□ -0.46
Pcif1-201ENSMUST00000041643 CrotQ9DC50 612 aa12.16□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Myo1cQ9WTI7 1063 aa12.16□□□□□ -0.46
Pcif1-201ENSMUST00000041643 PapolbQ9WVP6 641 aa12.16□□□□□ -0.46
Pcif1-201ENSMUST00000041643 FscbA1EGX6 1074 aa12.16□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Vmn2r67K7N6T2 851 aa12.16□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Gm3164L7N2B9 238 aa12.16□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Gm3264L7N2C5 238 aa12.16□□□□□ -0.46
Pcif1-201ENSMUST00000041643 UmpsP13439 481 aaKnown RBP12.16□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Sstr1P30873 391 aa12.16□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Cldn11Q60771 207 aa12.16□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Fnip1Q68FD7 1165 aa12.16□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Tas2r102Q7M717 329 aa12.16□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Ccdc50Q810U5 305 aaKnown RBP12.16□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Usp27Q8CEG8 438 aa12.16□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Aipl1Q924K1 328 aa12.16□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Ctu1Q99J10 420 aa12.16□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Tssc4Q9JHE7 317 aa12.16□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Ltbp1Q8CG19 1712 aa12.16□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Foxn2E9Q7L6 429 aa12.16□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Smpd2O70572 419 aa12.16□□□□□ -0.46
Pcif1-201ENSMUST00000041643 LgmnO89017 435 aa12.16□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Hcls1P49710 486 aaKnown RBP12.16□□□□□ -0.46
Pcif1-201ENSMUST00000041643 DsppP97399 934 aa12.16□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Stard3Q61542 446 aa12.16□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Slc20a1Q61609 681 aa12.16□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Fbxw21Q8BI38 468 aa12.16□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Slc25a24Q8BMD8 475 aa12.16□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Tmem154Q8C4Q9 181 aa12.16□□□□□ -0.46
Pcif1-201ENSMUST00000041643 PolbQ8K409 335 aa12.16□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Olfr1502Q8VG66 316 aa12.16□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Q91Z58 1206 aa12.16□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Pdxdc1Q99K01 787 aaKnown RBP12.16□□□□□ -0.46
Pcif1-201ENSMUST00000041643 EvplQ9D952 2035 aa12.16□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Wdr46Q9Z0H1 622 aaKnown RBP12.16□□□□□ -0.46
Pcif1-201ENSMUST00000041643 PtproE9Q612 1226 aa12.16□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Kng1O08677 661 aa12.16□□□□□ -0.46
Pcif1-201ENSMUST00000041643 AurkcO88445 282 aa12.16□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Cd44P15379 778 aa12.16□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Dab2P98078 766 aa12.16□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Haus3Q8QZX2 570 aa12.16□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Olfr356Q8VFP5 315 aa12.16□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Slc14a1Q8VHL0 384 aa12.16□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Lrp8Q924X6 996 aa12.16□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Katnbl1Q9CWJ3 299 aa12.16□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Rgs3Q9DC04 966 aa12.16□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Slc8a3S4R2P9 928 aa12.16□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Calhm3J3QMI4 347 aa12.16□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Dpysl4O35098 572 aa12.16□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Apoa4P06728 395 aa12.16□□□□□ -0.46
Pcif1-201ENSMUST00000041643 VegfaQ00731 214 aa12.16□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Phactr4Q501J7 694 aa12.16□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Dusp11Q6NXK5 321 aaKnown RBP12.16□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Zswim6Q80TB7 1207 aa12.16□□□□□ -0.46
Pcif1-201ENSMUST00000041643 SowahaQ8BLS7 548 aa12.16□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Slc9a4Q8BUE1 797 aa12.16□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Thop1Q8C1A5 687 aaKnown RBP12.16□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Q8CC96 669 aa12.16□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Cdkl2Q9QUK0 568 aa12.16□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Hic1Q9R1Y5 733 aa12.16□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Lilra5D3Z7A9 295 aa12.15□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Fbxl18E9PYR1 771 aa12.15□□□□□ -0.46
Pcif1-201ENSMUST00000041643 PbsnO08976 174 aa12.15□□□□□ -0.46
Pcif1-201ENSMUST00000041643 EgfP01132 1217 aa12.15□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Il1aP01582 270 aa12.15□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Znf112Q0VAW7 879 aa12.15□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Tmem63bQ3TWI9 832 aa12.15□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Plcl1Q3USB7 1096 aa12.15□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Insm1Q63ZV0 521 aa12.15□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Parp6Q6P6P7 630 aa12.15□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Arrdc3Q7TPQ9 414 aa12.15□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Trerf1Q8BXJ2 1205 aa12.15□□□□□ -0.46
Pcif1-201ENSMUST00000041643 ItchQ8C863 864 aa12.15□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Ndufs1Q91VD9 727 aaKnown RBP12.15□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Afg3l1Q920A7 789 aaKnown RBP12.15□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Themis3Q9CU24 569 aa12.15□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Marc1Q9CW42 340 aa12.15□□□□□ -0.46
Pcif1-201ENSMUST00000041643 B4galt4Q9JJ04 344 aa12.15□□□□□ -0.46
Pcif1-201ENSMUST00000041643 H2afyQ9QZQ8 372 aaKnown RBP12.15□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Gm4985A2ALC6 410 aa12.15□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Gm8909G3UXE9 396 aa12.15□□□□□ -0.46
Pcif1-201ENSMUST00000041643 DazlQ64368 298 aaKnown RBP12.15□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Defb34Q7TNV8 81 aa12.15□□□□□ -0.46
Pcif1-201ENSMUST00000041643 AarsQ8BGQ7 968 aa12.15□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Pxylp1Q8BHA9 480 aa12.15□□□□□ -0.46
Pcif1-201ENSMUST00000041643 CntrobQ8CB62 887 aa12.15□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Sash3Q8K352 380 aa12.15□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Ap2b1Q9DBG3 937 aa12.15□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Habp4Q9JKS5 411 aaKnown RBP12.15□□□□□ -0.46
Pcif1-201ENSMUST00000041643 4933424G06RikA0A140LIP3 267 aa12.15□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Trim30bE9PVL6 203 aa12.15□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Gm8922F6XVS9 199 aa12.15□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Lamp2P17047 415 aa12.15□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Oaz1P54369 227 aa12.15□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Echdc2Q3TLP5 296 aa12.15□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Q5XFZ0 217 aa12.15□□□□□ -0.46
Pcif1-201ENSMUST00000041643 Mta3Q924K8 591 aa12.15□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 36.8 ms