RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Arhgef16Q3U5C8 713 aa14.23□□□□□ -0.13
Col5a1-201ENSMUST00000028280 WhrnQ80VW5 918 aa14.23□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Bhlhe22Q8C6A8 355 aa14.23□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Creld1Q91XD7 420 aa14.23□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Bcs1lQ9CZP5 418 aa14.23□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Map3k6Q9WTR2 1291 aa14.23□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Tssk3Q9D2E1 268 aa14.23□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Ttyh1Q9D3A9 450 aa14.23□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Vmn2r25W4VSP2 855 aa14.23□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Itm2bO89051 266 aa14.23□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Rad54lP70270 747 aa14.23□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Kctd8Q50H33 476 aa14.23□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Cyp4b1Q64462 511 aa14.23□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Ints6Q6PCM2 883 aa14.23□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Znf513Q6PD29 541 aa14.23□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Mrgprx1Q8CIP3 322 aa14.23□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Olfr330Q8VGD9 315 aa14.23□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Ripk2P58801 539 aa14.23□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Rnf145Q5SWK7 663 aa14.23□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Atp2c1Q80XR2 918 aa14.23□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Camk1dQ8BW96 385 aa14.23□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Emc2Q9CRD2 297 aa14.23□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Hipk3Q9ERH7 1192 aa14.23□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Gm14781A2A9Q9 366 aa14.23□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Pik3c3Q6PF93 887 aa14.23□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Lrrc75bQ7TPD7 306 aa14.23□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Olfr169Q7TS53 313 aa14.23□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Plcz1Q8K4D7 647 aa14.23□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Reep2Q8VCD6 254 aa14.23□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Serpinb1bQ8VHP7 382 aa14.23□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Nfu1Q9QZ23 255 aa14.23□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Rps6ka4Q9Z2B9 773 aa14.23□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Ms4a14A0A087WSD2 1232 aa14.23□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Gm10436L7N1Y3 520 aa14.23□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Cand2Q6ZQ73 1235 aa14.23□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Slitrk1Q810C1 696 aa14.23□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Gpr1Q8K087 353 aa14.23□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Vangl2Q91ZD4 521 aa14.23□□□□□ -0.13
Col5a1-201ENSMUST00000028280 MceeQ9D1I5 178 aa14.23□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Tex22Q9D9U4 189 aa14.23□□□□□ -0.13
Col5a1-201ENSMUST00000028280 SynrgQ5SV85 1306 aa14.23□□□□□ -0.13
Col5a1-201ENSMUST00000028280 9330159F19RikD3Z623 648 aa14.23□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Rhox13F6YCR7 232 aa14.23□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Vmn2r29L7N2D4 852 aa14.23□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Ifi203O35368 408 aa14.23□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Ubp1Q811S7 540 aa14.23□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Guf1Q8C3X4 651 aaKnown RBP14.23□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Kifc1Q9QWT9 674 aa14.23□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Iqgap3F8VQ29 1632 aa14.23□□□□□ -0.13
Col5a1-201ENSMUST00000028280 AV320801A2AWL3 467 aa14.22□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Rab12P35283 243 aa14.22□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Cd86P42082 309 aa14.22□□□□□ -0.13
Col5a1-201ENSMUST00000028280 UcmaQ14BU0 138 aa14.22□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Tas2r104Q7M723 302 aa14.22□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Adgre4Q91ZE5 689 aa14.22□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Trim39Q9ESN2 488 aa14.22□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Zfyve9A2A8R0 1397 aa14.22□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Slc9a6A1L3P4 702 aa14.22□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Smim22J3QP37 91 aa14.22□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Aldh3a1P47739 453 aa14.22□□□□□ -0.13
Col5a1-201ENSMUST00000028280 McubQ810S1 345 aa14.22□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Grin3bQ91ZU9 1003 aa14.22□□□□□ -0.13
Col5a1-201ENSMUST00000028280 MlxO08609 298 aa14.22□□□□□ -0.13
Col5a1-201ENSMUST00000028280 PamP97467 979 aa14.22□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Tmco6Q8BQX5 494 aa14.22□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Mtmr4Q91XS1 1190 aa14.22□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Pcdha3Q91Y16 942 aa14.22□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Mbd5B1AYB6 1498 aa14.22□□□□□ -0.13
Col5a1-201ENSMUST00000028280 RalgdsQ03385 852 aa14.22□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Gm4951Q3UED7 406 aa14.22□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Psen2Q61144 448 aa14.22□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Uba3Q8C878 462 aa14.22□□□□□ -0.13
Col5a1-201ENSMUST00000028280 PnkpQ9JLV6 522 aaKnown RBP14.22□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Gm5849J3QPE5 117 aa14.22□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Rrm1P07742 792 aa14.22□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Fgfr2P21803 821 aa14.22□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Cyp2d10P24456 504 aa14.22□□□□□ -0.13
Col5a1-201ENSMUST00000028280 AcadlP51174 430 aaKnown RBP14.22□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Uchl4P58321 233 aa14.22□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Klra9Q2TJJ8 266 aa14.22□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Pgrmc2Q80UU9 217 aaKnown RBP14.22□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Srp68Q8BMA6 625 aaKnown RBP14.22□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Prkaa2Q8BRK8 552 aa14.22□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Ptpn7Q8BUM3 359 aa14.22□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Kcnv1Q8BZN2 503 aa14.22□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Ccdc7bE9Q9Y3 381 aa14.22□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Arf3P61205 181 aa14.22□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Arf1P84078 181 aa14.22□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Capn13Q3UW68 665 aa14.22□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Fbxw10Q5SUS0 1030 aa14.22□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Slc29a2Q61672 456 aa14.22□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Dennd5aQ6PAL8 1287 aa14.22□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Tmem82Q8R115 356 aa14.22□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Snap47Q8R570 413 aa14.22□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Mettl16Q9CQG2 553 aaKnown RBP14.22□□□□□ -0.13
Col5a1-201ENSMUST00000028280 GrapQ9CX99 217 aa14.22□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Scnn1bQ9WU38 638 aa14.22□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Oog1E9Q5G7 496 aa14.21□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Kansl1lQ5DTI6 991 aa14.21□□□□□ -0.13
Col5a1-201ENSMUST00000028280 Bhmt2Q91WS4 363 aa14.21□□□□□ -0.13
Retrieved 100 of 22,080 RNA–protein pairs in 15.9 ms